TCONS_00072883 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072883
Unique NameTCONS_00072883
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2560

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072883 ID=TCONS_00072883|Name=TCONS_00072883|organism=Clytia hemisphaerica|type=transcript|length=2560bp
aTTGGATAGACGTGTGAAAAATTTATCgacgaaaatattttaaagatgtG
GTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAG
TAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaagttat
gaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAGATCCA
TAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGATTTACG
GTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAATCCCTT
CAAAGAAAGATTATGAAGGAGTTGAATGTCGGCCCATTGGAATTCAGCAT
TGCGATGAAGACTTATCAAAATGTCGTCACAGTTCAGAATGAGGAAAACA
TACAGGAAGATGTATACGTAGGAGGAATAGAAGGCATAAATACGTCTCCA
ACAGATAGTGAGAACAATACTAAAGTACAGAGAAGTAAAGATACTTCTCC
ACCAAATGATTTAGCTCTTATGGAAGAACTTTGTACAATCAAAGGTGATT
ATGGTAAAATGAAAGGTGACTACGACAGCATTGTGGACAGGAACACGGCA
GCTGAGACTGAGATCCGGCGATTATCTTTGGTCAAAGAAGAATCCGATCT
TGTACATCGTGAAGAGGCAGATGCTTTGTGCAACACGATCGatgatttga
ataaaaaattgacaacgGCTCGTAAAGAGGTTGAAGAGATGGGCATGGAT
ATCAAGGAATGTATAGCCGATACTACCTCTCAGTTGAAACAACACTTTGA
CGTGTTATTGGCcgaagaaaaagaacaaaaccAAGCCCTTCTAGCAAAAA
AGGAGGCTGATATTTGTGAAAAAGACTCTCaaatctttgaaataaaaaaa
tattttgagaggGAGCTAGATGCCGTGAAAGAACAAGGAGTGAAACGTTT
AGAAAGAATGCtttctattgaaaaagaaaaatcggAGATGGATCAAAAAA
CTATTCAAGAGCTTCGTAAAAGCTTGGATGCCGATCAAAAAATACTCCTT
GATAAACAACACTCCTTACAGCAGCAAACGGAATTAGTAAATGGCCAGGC
CTCTCAGCTCGTAGAATTGAATGACAAGAAAGCTGTCATCAAGAAGAAAT
TGTTTAAGGCTACCAAAGAGGTCAAGGAAGCTAAAGATAAGGTAGCCCAG
GGTCAAGAAGCGTTTAACAAACAACAACAGGAGCTGGAAGATCTAAACGC
AATTAATGAGATATTGACAAAGAGTAACGAGGAAGAGCGTAAGAAACATA
TTGAAGAACTGACACAAAAAGAAAGCGAGTTGGTTAAGATGTGCGACAGT
TCCAAACAGCAACTCAACATCAGCGAACAAAAAATGGGATTGCTCAAGAC
AGAGAATGATGCATTGAAATTAGCGCAAGTCGAATCTGAATTAACACATG
CGGCAGAGATGGCGAAACAGAATGAAGTATTGGTCCGTGCGAAAAACGCT
CACAAGGACGAGATTGGTGAAGCCAAGGAGCAGATTGACCAGTTGAAGAG
AGAAGCGGGCCAGATGGATTTCATGCACCAGGAGACATTGGCTGTAAAAT
ATGGCAACCTGGAAGAATCTGAATTGACAATTTGtttcttacaaaaagaa
aaagcaataTGTGAAAAGAAACTAGAGACTGCATCGAAAAGTGTTCTTTG
TTTGGAGAAGAGATTAAACCAACGTGAAGTCGAGATTCGTGCTCGTTTGG
AAGATATTTCTgcacaaaagaagaaagaaaatgcGGACAAAGCTACTATC
GAAAAACAAAAGGTCTCTATGGAGAAAATCCAGAACGATTTGAAACGTGA
AAAGAAGAGGATCGAATCTTTGATCCGTGAACGTAATGCATACAGAGATG
AAgctCACACGAATAGCATACAAAAGATTGAAGCTAACAAAAAGCTTGAG
GCTACTAAAGAACACTTGCAAACGGTAAAGAAAGAATATGAGTGTAAAAT
TGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGGGCAAGCAAAAGC
AAAAGAAACgaaagagaaaatcaaaacaggtTGCTTCCAACGACATCGAA
GCAAACACACTTACTATTGCTACACAAACTAATAAAGAACTTACAAACCC
ACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGACCAAAGAAGTCAG
ATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAAAGtttt
gttcaACGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAGCAAATC
AGACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTGTATATG
ACACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTCATCAAG
GTCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGTGACGTCATCA
CCAAATTATACGTATACatttgtaaataattttctcaTCCTGGATTCTTT
ATACTACTTTTTAccacttttttatatatataaattattttctaaaaact
aacccaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00072883-protein

>TCONS_00072883-protein ID=TCONS_00072883-protein|Name=TCONS_00072883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=797bp
MWWRATSLMTEDLKRSSKVRLSKGFYRGENQIKSYESGCGNTPKDDELCQ
IHRTLISYKDVTLPDKIYGGRNKQSYIVTDDNKSLQRKIMKELNVGPLEF
SIAMKTYQNVVTVQNEENIQEDVYVGGIEGINTSPTDSENNTKVQRSKDT
SPPNDLALMEELCTIKGDYGKMKGDYDSIVDRNTAAETEIRRLSLVKEES
DLVHREEADALCNTIDDLNKKLTTARKEVEEMGMDIKECIADTTSQLKQH
FDVLLAEEKEQNQALLAKKEADICEKDSQIFEIKKYFERELDAVKEQGVK
RLERMLSIEKEKSEMDQKTIQELRKSLDADQKILLDKQHSLQQQTELVNG
QASQLVELNDKKAVIKKKLFKATKEVKEAKDKVAQGQEAFNKQQQELEDL
NAINEILTKSNEEERKKHIEELTQKESELVKMCDSSKQQLNISEQKMGLL
KTENDALKLAQVESELTHAAEMAKQNEVLVRAKNAHKDEIGEAKEQIDQL
KREAGQMDFMHQETLAVKYGNLEESELTICFLQKEKAICEKKLETASKSV
LCLEKRLNQREVEIRARLEDISAQKKKENADKATIEKQKVSMEKIQNDLK
REKKRIESLIRERNAYRDEAHTNSIQKIEANKKLEATKEHLQTVKKEYEC
KIAQMQPIQETKAVGKQKQKKRKRKSKQVASNDIEANTLTIATQTNKELT
NPQEAKRNDLNEDRPKKSDLDNGKIQKVAKVQKSFVQRKSPSTISKNIVS
KSDVIFDQHDNERPWGVYDTSLVTFCIGIWFLLIKVCSIVTNDDSLW
Run BLAST on NCBI

transcript from alignment at scaffold_86:520534..524999+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072883 ID=TCONS_00072883|Name=TCONS_00072883|organism=Clytia hemisphaerica|type=transcript|length=4466bp|location=Sequence derived from alignment at scaffold_86:520534..524999+ (Clytia hemisphaerica)
aTTGGATAGACGTGTGAAAAATTTATCgacgaaaatattttaaagatgtG GTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAG TAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaagttat gaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAGATCCA TAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGATTTACG GTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAATCCCTT CAAAGAAAGGTTTGTTTATTGAGTCTATAATTACAATATTCGGCTATCAC GAAGTAAAGAATATTCTAGTTCTATTCTTCTAATCTAGTAGTTTTGGTTA AAACCATATCTTCTACCCCTACAACAACAGCCGCCTACCCAAGAGGAGCA ACCCAACATCAATTGATAAGAATTTTCACTTACTTTAGGGACAGTAAGTT AGGTACagctttttggcttttagaaaaaaGTCGATTGATATACTTGGAAA ACTGCCGTCTTATTCCGGACCATGTTTTTGTTTGCTGTGCAATATATGAC TTTCGAAAGGACTGTTTTTAGGCTTGAAGATAACTCTCACATTAGTCCAT GCAAACATTGATGCATTTTGTTACCCCTGACCTAAACACTAAAGGTGTGG CCTCAGCCTTAGTAAAATTAGAGCTCAGTCCTTTTATGGGCTTATTCATC CGCGAACTCCGActtaaacatttttcaaaaatgttatagATTATGAAGGA GTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATGAAGACTTATCAAA ATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGAAGATGTATACGTA GGAGGAATAGAAGGCATAAATACGTCTCCAACAGATAGTGAGAACAATAC TAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAATGATTTAGCTCTTA TGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAAAATGAAAGGTGAC TACGACAGCATTGTGGACAGGAACACGGCAGCTGAGACTGAGATCCGGCG ATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACATCGTGAAGAGGCAG ATGCTTTGTGCAACACGATCGatgatttgaataaaaaattgacaacgGCT CGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGGAATGTATAGCCGA TACTACCTCTCAGTTGAAACAACACTTTGACGTGTTATTGGCcgaagaaa aagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGCTGATATTTGTGAA AAAGACTCTCaaatctttgaaataaaaaaatattttgagaggGAGCTAGA TGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGAATGCtttctattg aaaaagaaaaatcggAGATGGATCAAAAAACTATTCAAGAGCTTCGTAAA AGCTTGGATGCCGATCAAAAAATACTCCTTGATAAACAACACTCCTTACA GCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAGCTCGTAGAATTGA ATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAAGGCTACCAAAGAG GTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAGAAGCGTTTAACAA ACAACAACAGGAGCTGGAAGATCTAAACGCAATTAATGAGATATTGACAA AGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGAACTGACACAAAAA GAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAACAGCAACTCAACAT CAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAATGATGCATTGAAAT TAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGAGATGGCGAAACAG AATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGGACGAGATTGGTGA AGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCGGGCCAGATGGATT TCATGCACCAGGAGACATTGGCTGTAAAATATGGCAACCTGGAAGAATCT GAATTGACAATTTGtttcttacaaaaagaaaaagcaataTGTGAAAAGAA ACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAGAAGAGATTAAACC AACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATATTTCTgcacaaaag aagaaagaaaatgcGGACAAAGCTACTATCGAAAAACAAAAGGTCTCTAT GGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAGAGGATCGAATCTT TGATCCGTGAACGTAATGCATACAGAGATGAAGTAAGATCTCAGCATTTT ATTCTAATAAATTGACATCGATCAGAATCCAATTAAAATAAATCTTTAGG AACTGAATAGCTAGGTTTTCCTTAAGAATAAATATTTATTGAGTAaatca ttttttgtttaaatgatTGTTGGTTAATCAGTATAAACGCTACaatagag tctctttaactcgaacctctataactcgattaTCTCCTTAATTTTTATTG TCCCTCCAGTCAACAATGCtttaaaccttactccataactcataATGTTC TTAACTCAAACACATTTGAGTAATGGAGGGTCAACTGGACTTACTGTGCT TCGTACACATCCAAATAAACTTTTACAATACAAAAtacgagaaaaaaata taacaatataggcgaaaataaaaaaatgtagtgtttccggagtgcggaaa ggaaaaaagctctcatgcggccggccggaaaatttttttttgctattttt NTAGTGTTTCCGGAGTGCGgtaaggaaaaaagctctcatgcggccggccg gaaaaatcttttttgctatttttgataacttaagatcattgaaatataac tttaaagataacctttatgtaaaaatagtatggagtaagccctgaatact aatatCTCAACTACCAACAAAAGTCTGCAGCtgggtcagaaaattttttt ttttcacccggccagTTTCCGGAAACATActacatatttttattttcgcc taaggTATAGATCGATATTGATCGCAGGTATTGGGAATGTTCCTCATCTA ATAAAAACTTGTCTTTAGGCAACCAGTAATTTCTTTCGAACATTTCTAGA GGGGAGACCGTCTTGATTATGTCTGGgttatcaaaattatatttaaatat ttctttttaggctCACACGAATAGCATACAAAAGATTGAAGCTAACAAAA AGCTTGAGGCTACTAAAGAACACTTGCAAACGGTTNAGATTGAAGCTAAC AAAAAGCTTGAGGCTACTAAAGAACACTTGCAAAAGGTAAAGAAAGAATA TGAGTGTAAAATTGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGG GCAAGCAAAAGCAAAAGAAACgaaagagaaaatcaaaacaggtTGCTTCC AACGACATCGAAGCAAACACACTTACTATTGCTACACAAACTAATAAAGA ACTTACAAACCCACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGAC CAAAGAAGTCAGATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTA CAAAAAAGGTATCTAAGCTAATGATGAATAAATCGAACGATAGAATCTTG GACTACTATATAGTTCACCTGTTTCCTTTCTGCTTCTAGACATTTTCGAT CACTGAATGCCcccccccttctcacagacccggtaggatttttccagCCA GTAgaggtaaaaataacggaccaaaactcaatggagattgatattcccat gtttttaatTGCTGGGGAATTGAATTCCgttgttttcgagccagaaaatt cagtggggatggaaaaaatagcacaatattttacagtgagaatttgctta tctgattatttttagcggggacaaaaatttgagtagaattttccaccggg gacgatattttggctagtttttccagtgggaagggttcccagtgggtctg tgagaagggattGTTGAATAGATCTTGCCTCGCAACCCTTTTACAATGTC CAGATTGGTAAAGCTTGCTTTCCATTAAACATCATCACTActgatttttt agttttgttcaACGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAG CAAATCAGACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTG TATATGACACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTC ATCAAGGTCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGTGACG TCATCACCAAATTATACGTATACatttgtaaataattttctcaTCCTGGA TTCTTTATACTACTTTTTAccacttttttatatatataaattattttcta aaaactaacccaaaaa

Coding sequence (CDS) from alignment at scaffold_86:520534..524999+

>TCONS_00072883 ID=TCONS_00072883|Name=TCONS_00072883|organism=Clytia hemisphaerica|type=CDS|length=11970bp|location=Sequence derived from alignment at scaffold_86:520534..524999+ (Clytia hemisphaerica)
atgtGGTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTC
GAAAGTAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaa
gttatgaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAG
ATCCATAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGAT
TTACGGTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAAT
CCCTTCAAAGAAAGATTATGAAGGAGTTGAATGTCGGCCCATTGGAATTC
AGCATTGCGATGAAGACTTATCAAAATGTCGTCACAGTTCAGAATGAGGA
AAACATACAGGAAGATGTATACGTAGGAGGAATAGAAGGCATAAATACGT
CTCCAACAGATAGTGAGAACAATACTAAAGTACAGAGAAGTAAAGATACT
TCTCCACCAAATGATTTAGCTCTTATGGAAGAACTTTGTACAATCAAAGG
TGATTATGGTAAAATGAAAGGTGACTACGACAGCATTGTGGACAGGAACA
CGGCAGCTGAGACTGAGATCCGGCGATTATCTTTGGTCAAAGAAGAATCC
GATCTTGTACATCGTGAAGAGGCAGATGCTTTGTGCAACACGATCGatga
tttgaataaaaaattgacaacgGCTCGTAAAGAGGTTGAAGAGATGGGCA
TGGATATCAAGGAATGTATAGCCGATACTACCTCTCAGTTGAAACAACAC
TTTGACGTGTTATTGGCcgaagaaaaagaacaaaaccAAGCCCTTCTAGC
AAAAAAGGAGGCTGATATTTGTGAAAAAGACTCTCaaatctttgaaataa
aaaaatattttgagaggGAGCTAGATGCCGTGAAAGAACAAGGAGTGAAA
CGTTTAGAAAGAATGCtttctattgaaaaagaaaaatcggAGATGGATCA
AAAAACTATTCAAGAGCTTCGTAAAAGCTTGGATGCCGATCAAAAAATAC
TCCTTGATAAACAACACTCCTTACAGCAGCAAACGGAATTAGTAAATGGC
CAGGCCTCTCAGCTCGTAGAATTGAATGACAAGAAAGCTGTCATCAAGAA
GAAATTGTTTAAGGCTACCAAAGAGGTCAAGGAAGCTAAAGATAAGGTAG
CCCAGGGTCAAGAAGCGTTTAACAAACAACAACAGGAGCTGGAAGATCTA
AACGCAATTAATGAGATATTGACAAAGAGTAACGAGGAAGAGCGTAAGAA
ACATATTGAAGAACTGACACAAAAAGAAAGCGAGTTGGTTAAGATGTGCG
ACAGTTCCAAACAGCAACTCAACATCAGCGAACAAAAAATGGGATTGCTC
AAGACAGAGAATGATGCATTGAAATTAGCGCAAGTCGAATCTGAATTAAC
ACATGCGGCAGAGATGGCGAAACAGAATGAAGTATTGGTCCGTGCGAAAA
ACGCTCACAAGGACGAGATTGGTGAAGCCAAGGAGCAGATTGACCAGTTG
AAGAGAGAAGCGGGCCAGATGGATTTCATGCACCAGGAGACATTGGCTGT
AAAATATGGCAACCTGGAAGAATCTGAATTGACAATTTGtttcttacaaa
aagaaaaagcaataTGTGAAAAGAAACTAGAGACTGCATCGAAAAGTGTT
CTTTGTTTGGAGAAGAGATTAAACCAACGTGAAGTCGAGATTCGTGCTCG
TTTGGAAGATATTTCTgcacaaaagaagaaagaaaatgcGGACAAAGCTA
CTATCGAAAAACAAAAGGTCTCTATGGAGAAAATCCAGAACGATTTGAAA
CGTGAAAAGAAGAGGATCGAATCTTTGATCCGTGAACGTAATGCATACAG
AGATGAAgctCACACGAATAGCATACAAAAGATTGAAGCTAACAAAAAGC
TTGAGGCTACTAAAGAACACTTGCAAACGGTAAAGAAAGAATATGAGTGT
AAAATTGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGGGCAAGCA
AAAGCAAAAGAAACgaaagagaaaatcaaaacaggtTGCTTCCAACGACA
TCGAAGCAAACACACTTACTATTGCTACACAAACTAATAAAGAACTTACA
AACCCACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGACCAAAGAA
GTCAGATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAAA
GttttgttcaACGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAGC
AAATCAGACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTGT
ATATGACACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTCA
TCAAGGTCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGatgtGG
TGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAGT
AAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaagttatg
aatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAGATCCAT
AGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGATTTACGG
TGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAATCCCTTC
AAAGAAAGATTATGAAGGAGTTGAATGTCGGCCCATTGGAATTCAGCATT
GCGATGAAGACTTATCAAAATGTCGTCACAGTTCAGAATGAGGAAAACAT
ACAGGAAGATGTATACGTAGGAGGAATAGAAGGCATAAATACGTCTCCAA
CAGATAGTGAGAACAATACTAAAGTACAGAGAAGTAAAGATACTTCTCCA
CCAAATGATTTAGCTCTTATGGAAGAACTTTGTACAATCAAAGGTGATTA
TGGTAAAATGAAAGGTGACTACGACAGCATTGTGGACAGGAACACGGCAG
CTGAGACTGAGATCCGGCGATTATCTTTGGTCAAAGAAGAATCCGATCTT
GTACATCGTGAAGAGGCAGATGCTTTGTGCAACACGATCGatgatttgaa
taaaaaattgacaacgGCTCGTAAAGAGGTTGAAGAGATGGGCATGGATA
TCAAGGAATGTATAGCCGATACTACCTCTCAGTTGAAACAACACTTTGAC
GTGTTATTGGCcgaagaaaaagaacaaaaccAAGCCCTTCTAGCAAAAAA
GGAGGCTGATATTTGTGAAAAAGACTCTCaaatctttgaaataaaaaaat
attttgagaggGAGCTAGATGCCGTGAAAGAACAAGGAGTGAAACGTTTA
GAAAGAATGCtttctattgaaaaagaaaaatcggAGATGGATCAAAAAAC
TATTCAAGAGCTTCGTAAAAGCTTGGATGCCGATCAAAAAATACTCCTTG
ATAAACAACACTCCTTACAGCAGCAAACGGAATTAGTAAATGGCCAGGCC
TCTCAGCTCGTAGAATTGAATGACAAGAAAGCTGTCATCAAGAAGAAATT
GTTTAAGGCTACCAAAGAGGTCAAGGAAGCTAAAGATAAGGTAGCCCAGG
GTCAAGAAGCGTTTAACAAACAACAACAGGAGCTGGAAGATCTAAACGCA
ATTAATGAGATATTGACAAAGAGTAACGAGGAAGAGCGTAAGAAACATAT
TGAAGAACTGACACAAAAAGAAAGCGAGTTGGTTAAGATGTGCGACAGTT
CCAAACAGCAACTCAACATCAGCGAACAAAAAATGGGATTGCTCAAGACA
GAGAATGATGCATTGAAATTAGCGCAAGTCGAATCTGAATTAACACATGC
GGCAGAGATGGCGAAACAGAATGAAGTATTGGTCCGTGCGAAAAACGCTC
ACAAGGACGAGATTGGTGAAGCCAAGGAGCAGATTGACCAGTTGAAGAGA
GAAGCGGGCCAGATGGATTTCATGCACCAGGAGACATTGGCTGTAAAATA
TGGCAACCTGGAAGAATCTGAATTGACAATTTGtttcttacaaaaagaaa
aagcaataTGTGAAAAGAAACTAGAGACTGCATCGAAAAGTGTTCTTTGT
TTGGAGAAGAGATTAAACCAACGTGAAGTCGAGATTCGTGCTCGTTTGGA
AGATATTTCTgcacaaaagaagaaagaaaatgcGGACAAAGCTACTATCG
AAAAACAAAAGGTCTCTATGGAGAAAATCCAGAACGATTTGAAACGTGAA
AAGAAGAGGATCGAATCTTTGATCCGTGAACGTAATGCATACAGAGATGA
AgctCACACGAATAGCATACAAAAGATTGAAGCTAACAAAAAGCTTGAGG
CTACTAAAGAACACTTGCAAACGGTAAAGAAAGAATATGAGTGTAAAATT
GCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGGGCAAGCAAAAGCA
AAAGAAACgaaagagaaaatcaaaacaggtTGCTTCCAACGACATCGAAG
CAAACACACTTACTATTGCTACACAAACTAATAAAGAACTTACAAACCCA
CAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGACCAAAGAAGTCAGA
TCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAAAGttttg
ttcaACGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAGCAAATCA
GACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTGTATATGA
CACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTCATCAAGG
TCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGatgtGGTGGCGC
GCTACATCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAGTAAGACT
TTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaagttatgaatCAG
GCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAGATCCATAGAACA
TTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGATTTACGGTGGCCG
AAACAAACAGTCATACATTGTTACCGATGACAACAAATCCCTTCAAAGAA
AGATTATGAAGGAGTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATG
AAGACTTATCAAAATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGA
AGATGTATACGTAGGAGGAATAGAAGGCATAAATACGTCTCCAACAGATA
GTGAGAACAATACTAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAAT
GATTTAGCTCTTATGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAA
AATGAAAGGTGACTACGACAGCATTGTGGACAGGAACACGGCAGCTGAGA
CTGAGATCCGGCGATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACAT
CGTGAAGAGGCAGATGCTTTGTGCAACACGATCGatgatttgaataaaaa
attgacaacgGCTCGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGG
AATGTATAGCCGATACTACCTCTCAGTTGAAACAACACTTTGACGTGTTA
TTGGCcgaagaaaaagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGC
TGATATTTGTGAAAAAGACTCTCaaatctttgaaataaaaaaatattttg
agaggGAGCTAGATGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGA
ATGCtttctattgaaaaagaaaaatcggAGATGGATCAAAAAACTATTCA
AGAGCTTCGTAAAAGCTTGGATGCCGATCAAAAAATACTCCTTGATAAAC
AACACTCCTTACAGCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAG
CTCGTAGAATTGAATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAA
GGCTACCAAAGAGGTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAG
AAGCGTTTAACAAACAACAACAGGAGCTGGAAGATCTAAACGCAATTAAT
GAGATATTGACAAAGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGA
ACTGACACAAAAAGAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAAC
AGCAACTCAACATCAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAAT
GATGCATTGAAATTAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGA
GATGGCGAAACAGAATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGG
ACGAGATTGGTGAAGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCG
GGCCAGATGGATTTCATGCACCAGGAGACATTGGCTGTAAAATATGGCAA
CCTGGAAGAATCTGAATTGACAATTTGtttcttacaaaaagaaaaagcaa
taTGTGAAAAGAAACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAG
AAGAGATTAAACCAACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATAT
TTCTgcacaaaagaagaaagaaaatgcGGACAAAGCTACTATCGAAAAAC
AAAAGGTCTCTATGGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAG
AGGATCGAATCTTTGATCCGTGAACGTAATGCATACAGAGATGAAgctCA
CACGAATAGCATACAAAAGATTGAAGCTAACAAAAAGCTTGAGGCTACTA
AAGAACACTTGCAAACGGTAAAGAAAGAATATGAGTGTAAAATTGCTCAA
ATGCAACCTATCCAAGAGACAAAGGCAGTGGGCAAGCAAAAGCAAAAGAA
ACgaaagagaaaatcaaaacaggtTGCTTCCAACGACATCGAAGCAAACA
CACTTACTATTGCTACACAAACTAATAAAGAACTTACAAACCCACAAGAA
GCAAAGCGTAACGATTTAAACGAAGATCGACCAAAGAAGTCAGATCTAGA
TAATGGGAAGATTCAGAAAGTCGCTAAAGTACAAAAAAGttttgttcaAC
GAAAAAGTCCATCAACAATATCTAAAAACATTGTAAGCAAATCAGACGTT
ATTTTCGACCAACATGACAACGAAAGACCCTGGGGTGTATATGACACTTC
ACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTCATCAAGGTCTGCA
GCATTGTCACCAACGATGATTCACTCTGGTAGatgtGGTGGCGCGCTACA
TCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAGTAAGACTTTCAAA
GGGCTTTTATCgtggtgaaaatcaaattaaaagttatgaatCAGGCTGTG
GAAACACACCGAAAGACGACGAGTTGTGTCAGATCCATAGAACATTAATC
AGCTACAAGGATGTTACCCTTCCTGACAAGATTTACGGTGGCCGAAACAA
ACAGTCATACATTGTTACCGATGACAACAAATCCCTTCAAAGAAAGATTA
TGAAGGAGTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATGAAGACT
TATCAAAATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGAAGATGT
ATACGTAGGAGGAATAGAAGGCATAAATACGTCTCCAACAGATAGTGAGA
ACAATACTAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAATGATTTA
GCTCTTATGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAAAATGAA
AGGTGACTACGACAGCATTGTGGACAGGAACACGGCAGCTGAGACTGAGA
TCCGGCGATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACATCGTGAA
GAGGCAGATGCTTTGTGCAACACGATCGatgatttgaataaaaaattgac
aacgGCTCGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGGAATGTA
TAGCCGATACTACCTCTCAGTTGAAACAACACTTTGACGTGTTATTGGCc
gaagaaaaagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGCTGATAT
TTGTGAAAAAGACTCTCaaatctttgaaataaaaaaatattttgagaggG
AGCTAGATGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGAATGCtt
tctattgaaaaagaaaaatcggAGATGGATCAAAAAACTATTCAAGAGCT
TCGTAAAAGCTTGGATGCCGATCAAAAAATACTCCTTGATAAACAACACT
CCTTACAGCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAGCTCGTA
GAATTGAATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAAGGCTAC
CAAAGAGGTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAGAAGCGT
TTAACAAACAACAACAGGAGCTGGAAGATCTAAACGCAATTAATGAGATA
TTGACAAAGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGAACTGAC
ACAAAAAGAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAACAGCAAC
TCAACATCAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAATGATGCA
TTGAAATTAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGAGATGGC
GAAACAGAATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGGACGAGA
TTGGTGAAGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCGGGCCAG
ATGGATTTCATGCACCAGGAGACATTGGCTGTAAAATATGGCAACCTGGA
AGAATCTGAATTGACAATTTGtttcttacaaaaagaaaaagcaataTGTG
AAAAGAAACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAGAAGAGA
TTAAACCAACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATATTTCTgc
acaaaagaagaaagaaaatgcGGACAAAGCTACTATCGAAAAACAAAAGG
TCTCTATGGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAGAGGATC
GAATCTTTGATCCGTGAACGTAATGCATACAGAGATGAAgctCACACGAA
TAGCATACAAAAGATTGAAGCTAACAAAAAGCTTGAGGCTACTAAAGAAC
ACTTGCAAACGGTAAAGAAAGAATATGAGTGTAAAATTGCTCAAATGCAA
CCTATCCAAGAGACAAAGGCAGTGGGCAAGCAAAAGCAAAAGAAACgaaa
gagaaaatcaaaacaggtTGCTTCCAACGACATCGAAGCAAACACACTTA
CTATTGCTACACAAACTAATAAAGAACTTACAAACCCACAAGAAGCAAAG
CGTAACGATTTAAACGAAGATCGACCAAAGAAGTCAGATCTAGATAATGG
GAAGATTCAGAAAGTCGCTAAAGTACAAAAAAGttttgttcaACGAAAAA
GTCCATCAACAATATCTAAAAACATTGTAAGCAAATCAGACGTTATTTTC
GACCAACATGACAACGAAAGACCCTGGGGTGTATATGACACTTCACTTGT
CACCTTTTGTATCGGAATATGGTTTCTTCTCATCAAGGTCTGCAGCATTG
TCACCAACGATGATTCACTCTGGTAGatgtGGTGGCGCGCTACATCATTA
ATGACAGAAGACCTGAAGAGATCTTCGAAAGTAAGACTTTCAAAGGGCTT
TTATCgtggtgaaaatcaaattaaaagttatgaatCAGGCTGTGGAAACA
CACCGAAAGACGACGAGTTGTGTCAGATCCATAGAACATTAATCAGCTAC
AAGGATGTTACCCTTCCTGACAAGATTTACGGTGGCCGAAACAAACAGTC
ATACATTGTTACCGATGACAACAAATCCCTTCAAAGAAAGATTATGAAGG
AGTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATGAAGACTTATCAA
AATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGAAGATGTATACGT
AGGAGGAATAGAAGGCATAAATACGTCTCCAACAGATAGTGAGAACAATA
CTAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAATGATTTAGCTCTT
ATGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAAAATGAAAGGTGA
CTACGACAGCATTGTGGACAGGAACACGGCAGCTGAGACTGAGATCCGGC
GATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACATCGTGAAGAGGCA
GATGCTTTGTGCAACACGATCGatgatttgaataaaaaattgacaacgGC
TCGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGGAATGTATAGCCG
ATACTACCTCTCAGTTGAAACAACACTTTGACGTGTTATTGGCcgaagaa
aaagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGCTGATATTTGTGA
AAAAGACTCTCaaatctttgaaataaaaaaatattttgagaggGAGCTAG
ATGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGAATGCtttctatt
gaaaaagaaaaatcggAGATGGATCAAAAAACTATTCAAGAGCTTCGTAA
AAGCTTGGATGCCGATCAAAAAATACTCCTTGATAAACAACACTCCTTAC
AGCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAGCTCGTAGAATTG
AATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAAGGCTACCAAAGA
GGTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAGAAGCGTTTAACA
AACAACAACAGGAGCTGGAAGATCTAAACGCAATTAATGAGATATTGACA
AAGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGAACTGACACAAAA
AGAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAACAGCAACTCAACA
TCAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAATGATGCATTGAAA
TTAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGAGATGGCGAAACA
GAATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGGACGAGATTGGTG
AAGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCGGGCCAGATGGAT
TTCATGCACCAGGAGACATTGGCTGTAAAATATGGCAACCTGGAAGAATC
TGAATTGACAATTTGtttcttacaaaaagaaaaagcaataTGTGAAAAGA
AACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAGAAGAGATTAAAC
CAACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATATTTCTgcacaaaa
gaagaaagaaaatgcGGACAAAGCTACTATCGAAAAACAAAAGGTCTCTA
TGGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAGAGGATCGAATCT
TTGATCCGTGAACGTAATGCATACAGAGATGAAgctCACACGAATAGCAT
ACAAAAGATTGAAGCTAACAAAAAGCTTGAGGCTACTAAAGAACACTTGC
AAACGGTAAAGAAAGAATATGAGTGTAAAATTGCTCAAATGCAACCTATC
CAAGAGACAAAGGCAGTGGGCAAGCAAAAGCAAAAGAAACgaaagagaaa
atcaaaacaggtTGCTTCCAACGACATCGAAGCAAACACACTTACTATTG
CTACACAAACTAATAAAGAACTTACAAACCCACAAGAAGCAAAGCGTAAC
GATTTAAACGAAGATCGACCAAAGAAGTCAGATCTAGATAATGGGAAGAT
TCAGAAAGTCGCTAAAGTACAAAAAAGttttgttcaACGAAAAAGTCCAT
CAACAATATCTAAAAACATTGTAAGCAAATCAGACGTTATTTTCGACCAA
CATGACAACGAAAGACCCTGGGGTGTATATGACACTTCACTTGTCACCTT
TTGTATCGGAATATGGTTTCTTCTCATCAAGGTCTGCAGCATTGTCACCA
ACGATGATTCACTCTGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045229XLOC_045229Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072883-exon-scaffold_86-1491911889:520534..520842TCONS_00072883-exon-scaffold_86-1491911889:520534..520842Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1510915933:520534..520842TCONS_00072883-exon-scaffold_86-1510915933:520534..520842Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1575043694:520534..520842TCONS_00072883-exon-scaffold_86-1575043694:520534..520842Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1491911889:521323..522915TCONS_00072883-exon-scaffold_86-1491911889:521323..522915Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1510915933:521323..522915TCONS_00072883-exon-scaffold_86-1510915933:521323..522915Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1575043694:521323..522915TCONS_00072883-exon-scaffold_86-1575043694:521323..522915Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1491911889:523794..523865TCONS_00072883-exon-scaffold_86-1491911889:523794..523865Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1510915933:523794..523865TCONS_00072883-exon-scaffold_86-1510915933:523794..523865Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1575043694:523794..523865TCONS_00072883-exon-scaffold_86-1575043694:523794..523865Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1491911889:523920..524191TCONS_00072883-exon-scaffold_86-1491911889:523920..524191Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1510915933:523920..524191TCONS_00072883-exon-scaffold_86-1510915933:523920..524191Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1575043694:523920..524191TCONS_00072883-exon-scaffold_86-1575043694:523920..524191Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1491911889:524686..524999TCONS_00072883-exon-scaffold_86-1491911889:524686..524999Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1510915933:524686..524999TCONS_00072883-exon-scaffold_86-1510915933:524686..524999Clytia hemisphaericaexon
TCONS_00072883-exon-scaffold_86-1575043694:524686..524999TCONS_00072883-exon-scaffold_86-1575043694:524686..524999Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072883-proteinTCONS_00072883-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:520534..524999 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.170977 0.0489054 0.394777 0.331444 0.0654049 0.0455503 0.0194012 0.0257239 0 0.0446163 0.0764434 0.0100502 0.0204954 0 0.0121358 0.0130236 0 0 0.0454381 0.03428 0.0145903 0.02135 0 0.0222785 0.160624 0.122874 0 0.0220831 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072883 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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