TCONS_00072878 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072878
Unique NameTCONS_00072878
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2646

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072878 ID=TCONS_00072878|Name=TCONS_00072878|organism=Clytia hemisphaerica|type=transcript|length=2646bp
CCCAGTTAAAAAATCTGCCTTGGGATGTGAACGGTGAATTTTTTCTTCCC
ATTCACATCCCTGAACTGTAACCACTGTAACAGGCACTGAAACTGAAAAC
GGACCTAACGATATATTAGTTCAAAGACTTCTTTAATAATGGTGCAATGC
AAACTGAAAGACAACTTAGGAGATCATCCATTTTGGAGGACAGAAGATCA
GAAAAAAGCAACACCAACCATACCAAAAATGATTGAAGAAATTCTTGAAT
TTAAGAAAATATGGGACGGATTCCTAAAGAACATTAAAGACGAAAGCAGA
GCATACGTTGAAGAACAGCTGAAAGAGATTGAAATAGCTTTCTTTGTTAG
CGTACAGGTTGAAGAAGGGATAGGTATGGGGACCCAAGAAGAAGACTCTG
atgaaaaattaccaaaagatAAAGTTCGAGAAGACACTGAAAAGATTCTG
GAAGATATTGCAAGAATTGAATTAGAAGAAAAAACTGACAAGCATAATTT
CGACTACAAAAGAACTAAATCTGTTGAAACAGTTTTAGACACTTACAGAA
AAGGGCACTACTCTACAGTCAGCTTGTCAAAGTCGTTGCTTTTTTAGCTG
TAGTCAAAGAGTTTCTGCTTCTTTCAATTCAAAATGCGTGAGTGTATTTC
AGTACATGTTGGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAAC
TCTATTGTATTGAGCATGGCATCACACCAGATGGACGTATGGATACAAAC
GGAGGAGGATCAAATCCGAATGATGATTCTTTCAGTACATTTTTCAGTGA
GACAGGCGCTGGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTGAAC
CATCAGTTGTCGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCAC
CCTGAACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTCG
TGGTCACTACACTGTTGGCAAAGAATACATCGACCAAACATTAGACCGTA
TCCGCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATCTTC
CATTCATTCGGTGGAGGAACCGGATCTGGTTTTTCCTCCCTCCTTATGGA
GCGTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTATCT
ATCCGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCGATC
CTTACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATGGTTGA
TAATGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGAGCGAC
CAAGCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCAATT
ACAGCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGAGTT
TCAAACTAACTTAGTCCCATACCCCAGAATACATTTTCCAATGGCGACAT
ACGCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACTGTC
AATGAAATCACAAGCGCTTgctttgacccgcaaaatcaacTAGTCAAATG
CGATCCAAGACACGGCAAATACATGGCATGCTGTTTGTTATACCGTGGTG
ATGTTGTTCCTAAAGATGTCAATACAGCTATCGCTCAAATCAAAACCAAA
CGTACCATTCAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCGGTAT
CAACTACCAAGCACCATGTGCTGTCCCTGGAGGTGATCTTGCTAAAGTTC
AACGAGCCGTCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGCTTGG
GCCCGATTGGATCATAAATTCGATTTGATGTATTCGAAACGCGCTTTTGT
TCATTGGTATGTTGGCGAAGGTATGGAAGAAGGTGAGTTTTCAGAGGCTC
GTGAAGACATGGCTGCCCTTGAAAAAGATTATGAGGAGGTTGGAACGGAT
TCTATTGATGAAGATTACGATGAACAAGAAGAATACTAAAATGATGTCCG
AAAATTGAACACTTATTGCATAATGTCCGAAAAtcggaatattttttttc
caaaatgttatTTCATGCGATTCCTTCCATCATATATAGAttggaagaag
aaaattaattgtGCTAATATatatcacacccctgtctcagtaccccggtg
gaaccttttccctcagtggggatgaatatttctatcgaaatcccaatggg
gatagaaaatctattgtttccagctcaaaaattacagtgggaatggtttt
ggagtccaatTTTTTCCATCCAATTTTCAATTGGGATATAATTATAgggc
aattttccagtggggacgattttttggcctatttttccaccggggtgggg
gtccaccgggtctgtgacacagggatgttaTATCATTGTAGGAATAATAT
TCATCGGAAATTTTCTAAAAGTACCAAAATTAGGAGTAGATTGTCCgaat
ttatttctgatttaacaatgggcttttccagaaaaaaccgtgcaccccct
gttgaggaggtccaaccttttgtgacctacccccttggaattccagcaaa
ttttaggatcatacccctctggaattccgaatttttacaaatttttaatc
attacccccttggaattccgcttatttttgacggattttcgtctac
Run BLAST on NCBI

protein sequence of TCONS_00072878-protein

>TCONS_00072878-protein ID=TCONS_00072878-protein|Name=TCONS_00072878-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MRECISVHVGQAGVQIGNSCWELYCIEHGITPDGRMDTNGGGSNPNDDSF
STFFSETGAGKHVPRAVFIDLEPSVVDEIRTGTYRQLFHPEQLITGKEDA
ANNYARGHYTVGKEYIDQTLDRIRKLADACRGLQGFLIFHSFGGGTGSGF
SSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLDHTD
CAFMVDNEAIYDICKKNLDIERPSYTNLNRLISQIVSSITASLRFDGSLN
VDLTEFQTNLVPYPRIHFPMATYAPIISAEKAFHEQNTVNEITSACFDPQ
NQLVKCDPRHGKYMACCLLYRGDVVPKDVNTAIAQIKTKRTIQFVDWCPT
GFKVGINYQAPCAVPGGDLAKVQRAVCMLSNTTAIGEAWARLDHKFDLMY
SKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSIDEDYDEQEE
Y
Run BLAST on NCBI

transcript from alignment at scaffold_86:430254..443476+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072878 ID=TCONS_00072878|Name=TCONS_00072878|organism=Clytia hemisphaerica|type=transcript|length=13223bp|location=Sequence derived from alignment at scaffold_86:430254..443476+ (Clytia hemisphaerica)
CCCAGTTAAAAAATCTGCCTTGGGATGTGAACGGTGAATTTTTTCTTCCC ATTCACATCCCTGAACTGTAACCACTGTAACAGGCACTGAAACTGAAAAC GGACCTAACGATATATTAGTTCAAAGACTTCTTTAATAATGGTAAGACCG ATTCTTTTAatcatttcttttttcattagTGAAACTTTGTCATCCCATCA TGAACCATGCCCGACAGCGCTTCGCTGCCATTGTATGGCTCACAGGAGGG CAGGATGGCGATGGGAATCaggcagaaaaaaataaaaatcaacctTGAAT ACCGCAAGAGGGAAAATCTGGTTTTTAGGTTCTTAATTTATACCTTCAAA TTATGGTTTGGGATTATTTTTACGCTGAATAGTTGAGAGTTTATCAAGGG TATGTATATACCGTGAAaaggggtaacttgcatcagtggaggctaacatg catagccctcaaatgaaagacccggctggtcattaaaatatgaaaataaa tcaaaacaaaaatggtagagaacagctgcgagcggagctgcgtatgtgta ttttaatgaccagccaggtcattcatttgagggctatgcatgttagcctc cactgatgcaagttaccctttctcaCGACACGGTACATTAACAGGTTTTT TTTATAGAGGGAACCTTAAACTTGGCTCCGATGTCCGACACCGGAGTCTA GAGCTCCTTATTTTTTCCAGACAGTTTCAGTTTTTGTAATAACAACCACT CAACTAACATTTGTTATTCGTTATTCTGAAGGTGCAATGCAAACTGAAAG ACAACTTAGGAGATCATCCATTTTGGAGGACAGAAGATCAGAAAAAAGCA ACACCAACCATACCAAAAATGATTGAAGAAATTCTTGAATTTAAGAAAAT ATGGGACGGATTCCTAAAGAACATTAAAGACGAAAGCAGAGCATACGTTG AAGAACAGCTGAAAGAGATTGAAATAGCTTTCTTTGTTAGCGTACAGGTT GAAGAAGTAAGTATTAAAAAACTTTGTGtaataccgtgaagtcgggtaac ttgcatcagttcagtggaggctaacatgcatagccctcaaataaatgacc tggccGGTCCTTAAaacacaaagttaaatcaaaacaaaaatggtagagta gagctgcgagtggagctgcgtagttcatttgttttgaaattttgctgctt tgattggtcagtcatttgagggctatgcatgttagcctccactgatggaa gttacccgacttcaggGTAGACTTCAGTAGGATGTGATATCATTTCAAAT CCAAAAATTGGTGATGAAAACATTATGTAATGACTCCAGAAAAACTATTA CACAATTCTTCAGGCTGAAAAATTTAACTGACTTCAAGAAATTTTTGGGA AAGCTGAGCTTAATTTTGTGCAATTGTTTTTCACTTTCAGGGGATAGGTA TGGGGACCCAAGAAGAAGACTCTGatgaaaaattaccaaaagatAAAGTT CGAGAAGACACTGAAAAGATTCTGGAAGATATTGCAAGAATTGAATTAGA AGAAAAAACTGACAAGCATAATTTCGACTACAAAAGAACTAAATCTGTTG AAACAGTTTTAGACACTTACAGAAAAGGTAAAGAAAAACATCACAAGCCT GCtgcaaaaaatgaagaagaattgACCAATCtatataaagcaagaaaata tCTAAAGCAACTCATACAGTTAgaacaaaatgatcaaaaattcTCACAAC TCTTAGAGTTAGATATAATCAAAACTACACATGAAATACTAATGGAAAAT CTCCTTGAGGGTAAATCTGGACAACCTGGTCATTTTAGTAAATCCCAACG ATTTGGTAGCTTTAAAGGGAAAGAACATCACTATCCACATATTCCCGATG ACAAAGTGACAACAGATATTTTGACAGCTCTCGTTGATTGTTACAACAGT TCAGTTGACAAACAGAAAAGGGAAATCGACGAACTCAACTCAAAGACTTT ACAGCAAATATTCCAATCAGCtgcaaaatttttgtttatatttttacaac TACATCCATTTTCTGATGGTAATGGTCGGCTTGGACGATTATTATGTAGC TACTTCTTAGAGCTTATTTGCCCATTCCCAAGCTCAATTTACAATGTCTA CAGTCCAACAGAGAAAAGCGACTATGTCAAAGTCCTAGTTGCTGCAAGAG AAGGAATTGAGTTTAATGTAACATTGAATAACAAATCAGAAGGGCttgat tttttcggaaaacttTATGATCATGACGAATCCAATATGACAGCCCTTAT CATTGAATCCAACTGgttttcttggaaaaagttTATAAATGTTCtccaaa agaaattcaaagatgAGTGTATATTAATGTAAGAGAGTATCCAATTTAGG AAAAAATTCTGAAGACAAATTTTTACTATATGAACGCTTTGAAAAAATAG CAGAAATTTAGAATTCCTAAAAATAATCTTCGTTAAAATTCACATTATTA GTCGAGTGAAACAGCGTAAAGAAAATGACACGACTTACAAGGTCctaatt tctttcttctttgtttGTAAAACTAATTAAATCTATCAAGTTTAAAAAAT ATCACAAGTGCTTGTGAGGCTCTTACGGTGTAAATTCGTTCATAGGGTTA GAGGATATCATTctacaaattaaaatttagcCCTAGaaatggcaaaaaat tttcgatACTCCATTTGAATATATCTTCCACTCCCTATGAACGGTTTAAT CTGGAAGAACCCACTGCACATCATTCATCAATAGAAGCACCTATTTTACA TATTATGAAACATTGCTGGTAAAtgtatttattaatttttttatattcta ggagttttttttggaaaaactgtCTGCAAATTTCTATGATAtataatgaa tcaacggatcctgcactaatgtacttcccagttttctcaaaggtaacgaa tcgagtgggaattgaacccacgacctctcgcttgccgggcgattgctctc ccaacaaacattcgttacctttgagaaaactgggaagtacattagtgcag gatccgttgattcattacctataagtaatacgcacttgatttcacacaCT ATGATATATATTTAGTCATTATGAAAATGGGCAAAATAAAATCATAGTTT GTTTAACACCGTTTTTTCTAATACTCCTCTTTTAACAAAAGATATCACAA TTTATAGAAATGACTGCTAACCTTTTTATTTTAAGATCATGTGACTGTGA TGTGATGTCCCCTTTATTTTAACTTATTCTGACTCTTAAACTTTTAAAAT GGCCTTAACTAAAGGATGAGAAATGGTCTTCGTTATCCTAAATAAAGTCT AAAGTATACAAAAATTCACAGAAACTAATATTTTCCTACATGCTAAATTA CattgggaactaattttgacaaTCAGCAAAAACCTCCAATATTTAATTTC GGacaaaactaattttggcgaatagcGTTATTTCTTTTCCCTGTATATAA GCATGGAATTAtcatagacactggaaaaacaatgaGCTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNattttcataccacagtggagctatgagactcacatc taatatatgtcaatctcagctcttctcggagaaatattggaaagatattc ccaattcaaaattccgtgtcattataagcattttgtttgattttactcat ctgatgattttttttctcacaccagatttcataaatgtatccgTTTGGTA Ttgtagcatttattttcaaacttttggccagcaaaagtacgaatagaaaa agttagaaaactttttagaaattagagtattaatcatttttcaaaatcag agtccttcgagccgccatgacagttgtcctttgcggacaaagctagaaca tcagttgttttctgaaacaatagaaagacaatacttctctctccaccgtt tcatttgatgtttatccagagtctctataataaatccatgataTAAGCAG TTCTATTTTTTctgagacgattaatttgtctgagacgagcaatttagaaa atgagcattatggaggaATGTAttttccattcatgtttcaataaatagga tctcctccacagatcacattttaATAACTTCTcgtctcagacgatttttc cgtctcagtataaatgaaaCTAGTGTTTCAGGTAAAGAATATAGGTTAGT TTAATACTACACCCCTCTGTCACAGATCCGCTGGggcccagccccactgg aaaatttggcaaaatattCGTTCCcgttgggaaaaataccctagaatttc aactccactgagaaattgactttgatttcattccccttcgaaattcattg tttagaaattgcacttccaaaccatccccactagattttttatccccatt gagatttcattcgaagtttttatccccgctgtaggaaaaagtttcaccgg ggctgtgagaaggGTGTTATACTGTAGGAGGGGTTGAGAAAAACATGTAC AATGTTTTCCTTCTTACAAAGGAAAAATGATTTATATCTTTAGAATGAGC TTAAAAACAAGTCGAAGACTAAAGCcacaaaacaaaatgacaaGAATTTG AAATTAGATAAACCTATCAGAGCTCACAATCTCAGTCATGTGACCTTTTA GCTTATTGTTCAGATAGGGGCTATAAAGATTATAAGAGAGCTTTAAGTTA TTAACCATATTTTTCATATCCACATTTCcacatataatatttttttctca taatATAGGGCACTACTCTACAGTCAGCTTGTCAAAGTCGTTGCTTTTTT AGCTGTAGTCAAAGAGTTTCTGCTTCTTTCAATTCAAAATGGtaagtttt atttcattttttgaaaattcacagACCTAAAATGTCGGCTCATGGGGATC ACGAATGAGATCTCCATTTTTAAGATTGTAGATTAATATTTCCCATCATG CATTTTCCAGAAAAGATAATACTGACTAACCTTCCTCATTTTCtatatta tttaatttttgtacatccctttttgactatatttttgactttttgactat AACTCTAGAATTACCAAGGGGTTAGAAACCTGCTTAGAACCCCTATTATA TGAAGTTGGACACTTCCATTCTAAAATCTCTGAAACAGGCGATCTATCAT GAAAGATTCTTAAAGTAGGGTATCTTTGTGGAACAAATTTCGTACTCGTT CTTACAGGGGACAAGCTGgcgtttttacaagctcttattttatttggttg gtcgttaaccagtaataaaacaattttgttactttttctaaagaacgcgt catctctatcacttcaaatgaccatttagtgaagtatcttataaaaaact ccagctcatccccctTGCAGAACATACATAAGCAATGTAATAAATTGTTC GGTTTATTGACGTGAAGGGGCCGGATAGAAAATCTTGTCGAAATTTCCTT ATCAGTCTGTCGGATCAcaagaaagtatttttttgcTCCAAAACATTAAa tgtcatttattaaatttaaagTTTAGAGGAAATTTTGACCACGATGTTTT AGAAAACAACGAGGTGATAACTTATTAAACTTAAAAACcaccctttttat caatttttcgtgACTACAAAATATTTCACCCAGAATTTTAAAAGCTaaat aaatgtaattttaatgttttctttaaaattttctacaTCCGATCAAATTC TACTTCAACCTTCTATCACATATAGCCTCTTAAAATCTTAAGATTTAGCA TTAAAATTGAGATATAAACAAACTAAATACCATATCAAACATTGTGGGTA TTTTTTCACAATCCGAATTGTCTATTGTTTCCATTAGTGACATCGATTCT AAACGACAAGATTAACAATCACACTGCCACGAGAGCTCCTACAAGAGCAT GTTGatcaacgaaagaaaatttattgTGTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNgggggggggggggtactgaccttttctaattt ccacccttaaaactgtccaaaatatctaaaaattcgACCAAAATGTGTTC CTTTCATCTTGAAAATAAGTAAATTTGGAACCCTGCTGTCAGATATTTTC AAAGCCTAAAAAATGGACCCTTACCAGCGACACGTCCCGATAGCCGATAC CCAATTCTTcctactcttgggtacctaaattctgctgtattagcctcctt ttcaaaaaatctccgcccaggacattttttttccccccccccccccgttt attatattttgaggatttttccACCCACCTTGCTTATTCTAAACCCCTGC TTAgtaggtacctgagagtaagTGTCCTCGGATTTCAACTGTCTTCTTTT GAACGCCCTCTCTATCAAATTGGTTTGAACTCTGTCATTCAGTCACGACT ACAATTTTCTTATATCGGACGAAAAAAGTTCATACTGTGAGTTCATATAA AATTACGgtgatttctttttaattttcttcctttgtatcttttcacTAAT TCTCTGGTCCTTATTTCTTTCATCAGCGTGAGTGTATTTCAGTACATGTT GGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAACTCTATTGTAT TGAGCATGGCATCACACCAGATGGACGTATGGATACAAACGGAGGAGGAT CAAATCCGAATGATGATTCTTTCAGTACATTTTTCAGTGAGACAGGCGCT GGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTGAACCATCAGTTGT CGGTAAGTTTGTGCTTACTTGATAATTGGTGTGagccatggcgttctaaa tttacAGGCCTAGCAAGCGTGCAGCGACTTCAATTTTGTGGGGGCTCAAT TTttcgaagtcgttgcattgataccctgagtatcagaggttaagttttca aagaaaatagtaacctctgaagacaaataatagaaattttatcgcgcatg tgtcaatctaatcactgtagaaaNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCtacctggattgct ccacttacccttgatccttcccttaattgctgagcatcaagcagagaggc accaagtaccattttgggaatctttggtatgacaccaggttgaacccaca acccaCAACATTTGGCGAAGACATGAAAAGGTATGTAGGGAATGCTTCGA GACTTCGATGTCTACCGTACCGTAATGAGTAATGTGTGATTCTATGATCT TTTATTTTCAGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCACC CTGAACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTCGT GGTCACTACACTGTTGGTACGCCTTGATTTTAACACGTTCATCGGGCtcc tttaaaaataattgaactgGTCTGggatttcatcaaaaatttgactaatc tgaaatttgtttcaaatatattcaaattatgCATATGGACTGACGCAGAA TTAAAAATTATGATCTTTCTACCACGAAGATACTCGTACTCGGTAACAAg tatagactagtaaaccacgtcgttgtatttcgctgcagattaaactttca atgggatctattttttttaatgttttctgaATACAACGACTAGTTCCAAA TGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCAAACtgtaagttt gaaaaactttgacgtATAAATTTCAGTCTGAACTTGTTCAACAACACCAG GGGACAACACAAAATGACAAGGTAGAAGTCTGccgggggcactgaccttg gtGACTGACGGGGACGTGCCACGAAGgggtttgaaaagtggaccctgtga gATGTGAATGTtaggtaaatttgggacccattcagaacgaaaaatgattt ggtcgaaaaaatcaaaataatttcccaCTTTAACCCTGTAAATTGACAAA AGTGACTTAAAGTAGACAAAAAAttccaatccactctcccgcggcaattt ctattttttataagaactctttattataagcactattcccgcgttcctgt gtccaaggaaagacagacgcttgctagtctataACAAGTACGAAAGTTTT ATCttttatcatttatttttgtgtGTTTAGGCAAAGAATACATCGACCAA ACATTAGACCGTATCCGCAAACTAGCCGATGCTTGCCGAGGATTACAAGG ATTCTTGATCTTCCATTCATTCGGTGGAGGAACCGGATCTGGTTTTTCCT CCCTCCTTATGGAGCGTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTG GAATTCGCTATCTATCCGGCACCACAAGTATCCACTGCCGTCGTAGAGCC TTACAATTCGATCCTTACAACTCATACAACGTTGGATCATACAGATTGCG CTTTCATGGTTGATAATGAAGCCATTTACGATATCTGCAAAAAGAACTTG GACATTGAGCGACCAAGCTACACCAACTTGAATCGATTGATCAGCCAAAT TGTCTCCTCAATTACAGCTTCATTAAGATTCGACGGCTCATTGAATGTTG ATTTGACTGAGTTTCAAACTAACTTAGTCCCATACCCCAGAATACATTTT CCAATGGCGACATACGCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGA ACAAAATACTGTCAATGAAATCACAAGGTGTTGTAGTTGTTTAATATCTT TGACTCCATTCCAGAAGTATTTCTGTGGATTCTTTTCAGTTCAATCATTT TGCATGAACATACATCTCGATCTATGCACTGCAAACTTAGCAAATCttaa ctcgttttttttgtGATGATGAGTCAATTATAATACAGTGGAGTGTTTTT GACAACTCGAagttctataactcgaatgtctccttaactcaaaaaaacaa gttttcgtCAGGTCCCTTCAGCTCACGATGCCATACAAGCTTTACTCCat atctcgaaatttcctttaCTCGAACAAGCTCGTGTTATGGAGACTCGACT GcagtgaataaaaaattatgttatcTTCCCTATAGCGCTTgctttgaccc gcaaaatcaacTAGTCAAATGCGATCCAAGACACGGCAAATACATGGCAT GCTGTTTGTTATACCGTGGTGATGTTGTTCCTAAAGATGTCAATACAGCT ATCGCTCAAATCAAAACCAAACGTACCATTCAATTTGTTGATTGGTGTCC AACTGGATTCAAAGTCGGTATCAACTACCAAGCACCATGTGCTGTCCCTG GAGGTGATCTTGCTAAAGTTCAACGAGCCGTCTGTATGTTGTCTAATACA ACTGCTATCGGAGAGGCTTGGGCCCGATTGGATCATAAATTCGATTTGAT GTATTCGAAACGCGCTTTTGTTCATTGGTATGTTGGCGAAGGTTAGTGat gagttttgaaaaaattttcttcaagttttgGAATTTTTCGAACTTTCCAA GAAAGAGAGCCAAATTTTCCATAACTTTGATTCTAATGCGTACAATcaag gtcgtaatatttgagaaaaaaagaaaattctcacAAAATCTAGGGCGCAC CACACCCCTCCCCCCACATTCAATTTCAAAGCCTGGACCCACAACTCTAA cttaggttcgaagggtagagttttaactctgagtttttacACTAGACTTA GATCTGAggaccttagaatctgaggacccaaaagttcaagaatggtccaa caaggctcagaatatagcatCGAGTTTTATAAACCCCtcacaaattgaaa tattcgattacatttaacaaatagcccaaaagcaactttctcgcccgaac ttcaaatttcgaaaaacgtgaaaataaccaaaattctcattATATTTCAT TTCGACACATATTTTAGACGTTAATGACAAAAACGACAGATGAGATGGAC TTTTTATAAGacactttaataattggtcatttgaagtaataaaaatgacg cgttctttagaaaaagtaacaaaattgttttattactggttgttaacgac caaccaaatcaaataagagcttgtaaaaactccatctcgtcccaaaaAGG ACCTAACCAACAACCAACCAATCAGCTTTCTCTTTACTATGCTTCTATAT AGGTATGGAAGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCC TTGAAAAAGATTATGAGGAGGTTGGAACAGATTCTATTGATGAAGATTAC GATGAACAAGAAGAATACTAAAATTGAACACTTATTGCATAATGTCCGAA AATcggaatgttttttttccaaaatgttatTTCAAGCGATTTCTTCCATC ATATATAGATTGGAAGNGATCTTGCTAAAGTTCAACGAGCCGTCTGTATG TTGTCTAATACAACTGCTATCGGAGAGGCTTGGGCCCGATTGGATCATAA ATTCGATTTGATGTATTCGAAACGCGCTTTTGTTCATTGGTATGTTGGCG AAGGTTAGTGatgagttttgaaaaaattttcttcaagttttgGAATTTTT CGAACTTTCCAAGAAAGAGAGCCAAATTTTCCATAACTTTGATTCTAATG CGTACAATcaaggtcgtaatatttgagaaaaaaagaaaattctcacAAAA TCTAGGGCGCACCACACCCCTCCCCCCACATTCAATTTCAAAGCCTGGAC CCACAACTCTAActtaggttcgaagggtagagttttaactctgagttttt acACTAGACTTAGATCTGAggaccttagaatctgaggacccaaaagttca agaatggtccaacaaggctcagaatatagcatCGAGGTTTATAAACCCCt cacaaattgaaatattcgattacatttaacaaatagcccaaaagcaactt tctcgcccgaacttcaaatttcgaaaaacgttgaaataaccAAGATTCTC ATTATATTTCGACGCAGAAAACAACCAATCAACTTTATACTCTCTAGGTA TGGAAGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCTCTTGAA AAAGATTATGAGGAGGTTGGAACGGATTCTATTGATGAAGATTACGATGA ACAAGAAGAATACTAAAATGATGTCCGAAAATTGAACACTTATTGCATAA TGTCCGAAAAtcggaatattttttttccaaaatgttatTTCATGCGATTC CTTCCATCATATATAGAttggaagaagaaaattaattgtGCTAATATata tcacacccctgtctcagtaccccggtggaaccttttccctcagtggggat gaatatttctatcgaaatcccaatggggatagaaaatctattgtttccag ctcaaaaattacagtgggaatggttttggagtccaatTTTTTCCATCCAA TTTTCAATTGGGATATAATTATAgggcaattttccagtggggacgatttt ttggcctatttttccaccggggtgggggtccaccgggtctgtgacacagg gatgttaTATCATTGTAGGAATAATATTCATCGGAAATTTTCTAAAAGTA CCAAAATTAGGAGTAGATTGTCCgaatttatttctgatttaacaatgggc ttttccagaaaaaaccgtgcaccccctgttgaggaggtccaaccttttgt gacctacccccttggaattccagcaaattttaggatcatacccctctgga attccgaatttttacaaatttttaatcattacccccttggaattccgctt atttttgacggattttcgtctac

Coding sequence (CDS) from alignment at scaffold_86:430254..443476+

>TCONS_00072878 ID=TCONS_00072878|Name=TCONS_00072878|organism=Clytia hemisphaerica|type=CDS|length=9492bp|location=Sequence derived from alignment at scaffold_86:430254..443476+ (Clytia hemisphaerica)
ATGCGTGAGTGTATTTCAGTACATGTTGGACAAGCCGGTGTCCAAATTGG
CAATTCTTGCTGGGAACTCTATTGTATTGAGCATGGCATCACACCAGATG
GACGTATGGATACAAACGGAGGAGGATCAAATCCGAATGATGATTCTTTC
AGTACATTTTTCAGTGAGACAGGCGCTGGCAAACATGTTCCAAGAGCTGT
ATTCATTGATCTTGAACCATCAGTTGTCGACGAGATCAGAACTGGAACAT
ACCGTCAACTGTTTCACCCTGAACAACTGATCACCGGCAAAGAAGATGCG
GCTAACAATTACGCTCGTGGTCACTACACTGTTGGCAAAGAATACATCGA
CCAAACATTAGACCGTATCCGCAAACTAGCCGATGCTTGCCGAGGATTAC
AAGGATTCTTGATCTTCCATTCATTCGGTGGAGGAACCGGATCTGGTTTT
TCCTCCCTCCTTATGGAGCGTCTCTCCGTTGACTACGGTAAAAAATCAAA
GTTGGAATTCGCTATCTATCCGGCACCACAAGTATCCACTGCCGTCGTAG
AGCCTTACAATTCGATCCTTACAACTCATACAACGTTGGATCATACAGAT
TGCGCTTTCATGGTTGATAATGAAGCCATTTACGATATCTGCAAAAAGAA
CTTGGACATTGAGCGACCAAGCTACACCAACTTGAATCGATTGATCAGCC
AAATTGTCTCCTCAATTACAGCTTCATTAAGATTCGACGGCTCATTGAAT
GTTGATTTGACTGAGTTTCAAACTAACTTAGTCCCATACCCCAGAATACA
TTTTCCAATGGCGACATACGCTCCAATCATTTCAGCAGAGAAAGCTTTTC
ACGAACAAAATACTGTCAATGAAATCACAAGCGCTTgctttgacccgcaa
aatcaacTAGTCAAATGCGATCCAAGACACGGCAAATACATGGCATGCTG
TTTGTTATACCGTGGTGATGTTGTTCCTAAAGATGTCAATACAGCTATCG
CTCAAATCAAAACCAAACGTACCATTCAATTTGTTGATTGGTGTCCAACT
GGATTCAAAGTCGGTATCAACTACCAAGCACCATGTGCTGTCCCTGGAGG
TGATCTTGCTAAAGTTCAACGAGCCGTCTGTATGTTGTCTAATACAACTG
CTATCGGAGAGGCTTGGGCCCGATTGGATCATAAATTCGATTTGATGTAT
TCGAAACGCGCTTTTGTTCATTGGTATGTTGGCGAAGGTATGGAAGAAGG
TGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCCTTGAAAAAGATTATG
AGGAGGTTGGAACGGATTCTATTGATGAAGATTACGATGAACAAGAAGAA
TACTAAATGCGTGAGTGTATTTCAGTACATGTTGGACAAGCCGGTGTCCA
AATTGGCAATTCTTGCTGGGAACTCTATTGTATTGAGCATGGCATCACAC
CAGATGGACGTATGGATACAAACGGAGGAGGATCAAATCCGAATGATGAT
TCTTTCAGTACATTTTTCAGTGAGACAGGCGCTGGCAAACATGTTCCAAG
AGCTGTATTCATTGATCTTGAACCATCAGTTGTCGACGAGATCAGAACTG
GAACATACCGTCAACTGTTTCACCCTGAACAACTGATCACCGGCAAAGAA
GATGCGGCTAACAATTACGCTCGTGGTCACTACACTGTTGGCAAAGAATA
CATCGACCAAACATTAGACCGTATCCGCAAACTAGCCGATGCTTGCCGAG
GATTACAAGGATTCTTGATCTTCCATTCATTCGGTGGAGGAACCGGATCT
GGTTTTTCCTCCCTCCTTATGGAGCGTCTCTCCGTTGACTACGGTAAAAA
ATCAAAGTTGGAATTCGCTATCTATCCGGCACCACAAGTATCCACTGCCG
TCGTAGAGCCTTACAATTCGATCCTTACAACTCATACAACGTTGGATCAT
ACAGATTGCGCTTTCATGGTTGATAATGAAGCCATTTACGATATCTGCAA
AAAGAACTTGGACATTGAGCGACCAAGCTACACCAACTTGAATCGATTGA
TCAGCCAAATTGTCTCCTCAATTACAGCTTCATTAAGATTCGACGGCTCA
TTGAATGTTGATTTGACTGAGTTTCAAACTAACTTAGTCCCATACCCCAG
AATACATTTTCCAATGGCGACATACGCTCCAATCATTTCAGCAGAGAAAG
CTTTTCACGAACAAAATACTGTCAATGAAATCACAAGCGCTTgctttgac
ccgcaaaatcaacTAGTCAAATGCGATCCAAGACACGGCAAATACATGGC
ATGCTGTTTGTTATACCGTGGTGATGTTGTTCCTAAAGATGTCAATACAG
CTATCGCTCAAATCAAAACCAAACGTACCATTCAATTTGTTGATTGGTGT
CCAACTGGATTCAAAGTCGGTATCAACTACCAAGCACCATGTGCTGTCCC
TGGAGGTGATCTTGCTAAAGTTCAACGAGCCGTCTGTATGTTGTCTAATA
CAACTGCTATCGGAGAGGCTTGGGCCCGATTGGATCATAAATTCGATTTG
ATGTATTCGAAACGCGCTTTTGTTCATTGGTATGTTGGCGAAGGTATGGA
AGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCCTTGAAAAAG
ATTATGAGGAGGTTGGAACGGATTCTATTGATGAAGATTACGATGAACAA
GAAGAATACTAAATGCGTGAGTGTATTTCAGTACATGTTGGACAAGCCGG
TGTCCAAATTGGCAATTCTTGCTGGGAACTCTATTGTATTGAGCATGGCA
TCACACCAGATGGACGTATGGATACAAACGGAGGAGGATCAAATCCGAAT
GATGATTCTTTCAGTACATTTTTCAGTGAGACAGGCGCTGGCAAACATGT
TCCAAGAGCTGTATTCATTGATCTTGAACCATCAGTTGTCGACGAGATCA
GAACTGGAACATACCGTCAACTGTTTCACCCTGAACAACTGATCACCGGC
AAAGAAGATGCGGCTAACAATTACGCTCGTGGTCACTACACTGTTGGCAA
AGAATACATCGACCAAACATTAGACCGTATCCGCAAACTAGCCGATGCTT
GCCGAGGATTACAAGGATTCTTGATCTTCCATTCATTCGGTGGAGGAACC
GGATCTGGTTTTTCCTCCCTCCTTATGGAGCGTCTCTCCGTTGACTACGG
TAAAAAATCAAAGTTGGAATTCGCTATCTATCCGGCACCACAAGTATCCA
CTGCCGTCGTAGAGCCTTACAATTCGATCCTTACAACTCATACAACGTTG
GATCATACAGATTGCGCTTTCATGGTTGATAATGAAGCCATTTACGATAT
CTGCAAAAAGAACTTGGACATTGAGCGACCAAGCTACACCAACTTGAATC
GATTGATCAGCCAAATTGTCTCCTCAATTACAGCTTCATTAAGATTCGAC
GGCTCATTGAATGTTGATTTGACTGAGTTTCAAACTAACTTAGTCCCATA
CCCCAGAATACATTTTCCAATGGCGACATACGCTCCAATCATTTCAGCAG
AGAAAGCTTTTCACGAACAAAATACTGTCAATGAAATCACAAGCGCTTgc
tttgacccgcaaaatcaacTAGTCAAATGCGATCCAAGACACGGCAAATA
CATGGCATGCTGTTTGTTATACCGTGGTGATGTTGTTCCTAAAGATGTCA
ATACAGCTATCGCTCAAATCAAAACCAAACGTACCATTCAATTTGTTGAT
TGGTGTCCAACTGGATTCAAAGTCGGTATCAACTACCAAGCACCATGTGC
TGTCCCTGGAGGTGATCTTGCTAAAGTTCAACGAGCCGTCTGTATGTTGT
CTAATACAACTGCTATCGGAGAGGCTTGGGCCCGATTGGATCATAAATTC
GATTTGATGTATTCGAAACGCGCTTTTGTTCATTGGTATGTTGGCGAAGG
TATGGAAGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTGCCCTTG
AAAAAGATTATGAGGAGGTTGGAACGGATTCTATTGATGAAGATTACGAT
GAACAAGAAGAATACTAAATGCGTGAGTGTATTTCAGTACATGTTGGACA
AGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAACTCTATTGTATTGAGC
ATGGCATCACACCAGATGGACGTATGGATACAAACGGAGGAGGATCAAAT
CCGAATGATGATTCTTTCAGTACATTTTTCAGTGAGACAGGCGCTGGCAA
ACATGTTCCAAGAGCTGTATTCATTGATCTTGAACCATCAGTTGTCGACG
AGATCAGAACTGGAACATACCGTCAACTGTTTCACCCTGAACAACTGATC
ACCGGCAAAGAAGATGCGGCTAACAATTACGCTCGTGGTCACTACACTGT
TGGCAAAGAATACATCGACCAAACATTAGACCGTATCCGCAAACTAGCCG
ATGCTTGCCGAGGATTACAAGGATTCTTGATCTTCCATTCATTCGGTGGA
GGAACCGGATCTGGTTTTTCCTCCCTCCTTATGGAGCGTCTCTCCGTTGA
CTACGGTAAAAAATCAAAGTTGGAATTCGCTATCTATCCGGCACCACAAG
TATCCACTGCCGTCGTAGAGCCTTACAATTCGATCCTTACAACTCATACA
ACGTTGGATCATACAGATTGCGCTTTCATGGTTGATAATGAAGCCATTTA
CGATATCTGCAAAAAGAACTTGGACATTGAGCGACCAAGCTACACCAACT
TGAATCGATTGATCAGCCAAATTGTCTCCTCAATTACAGCTTCATTAAGA
TTCGACGGCTCATTGAATGTTGATTTGACTGAGTTTCAAACTAACTTAGT
CCCATACCCCAGAATACATTTTCCAATGGCGACATACGCTCCAATCATTT
CAGCAGAGAAAGCTTTTCACGAACAAAATACTGTCAATGAAATCACAAGC
GCTTgctttgacccgcaaaatcaacTAGTCAAATGCGATCCAAGACACGG
CAAATACATGGCATGCTGTTTGTTATACCGTGGTGATGTTGTTCCTAAAG
ATGTCAATACAGCTATCGCTCAAATCAAAACCAAACGTACCATTCAATTT
GTTGATTGGTGTCCAACTGGATTCAAAGTCGGTATCAACTACCAAGCACC
ATGTGCTGTCCCTGGAGGTGATCTTGCTAAAGTTCAACGAGCCGTCTGTA
TGTTGTCTAATACAACTGCTATCGGAGAGGCTTGGGCCCGATTGGATCAT
AAATTCGATTTGATGTATTCGAAACGCGCTTTTGTTCATTGGTATGTTGG
CGAAGGTATGGAAGAAGGTGAGTTTTCAGAGGCTCGTGAAGACATGGCTG
CCCTTGAAAAAGATTATGAGGAGGTTGGAACGGATTCTATTGATGAAGAT
TACGATGAACAAGAAGAATACTAAATGCGTGAGTGTATTTCAGTACATGT
TGGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAACTCTATTGTA
TTGAGCATGGCATCACACCAGATGGACGTATGGATACAAACGGAGGAGGA
TCAAATCCGAATGATGATTCTTTCAGTACATTTTTCAGTGAGACAGGCGC
TGGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTGAACCATCAGTTG
TCGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCACCCTGAACAA
CTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTCGTGGTCACTA
CACTGTTGGCAAAGAATACATCGACCAAACATTAGACCGTATCCGCAAAC
TAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATCTTCCATTCATTC
GGTGGAGGAACCGGATCTGGTTTTTCCTCCCTCCTTATGGAGCGTCTCTC
CGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTATCTATCCGGCAC
CACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCGATCCTTACAACT
CATACAACGTTGGATCATACAGATTGCGCTTTCATGGTTGATAATGAAGC
CATTTACGATATCTGCAAAAAGAACTTGGACATTGAGCGACCAAGCTACA
CCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCAATTACAGCTTCA
TTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGAGTTTCAAACTAA
CTTAGTCCCATACCCCAGAATACATTTTCCAATGGCGACATACGCTCCAA
TCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACTGTCAATGAAATC
ACAAGCGCTTgctttgacccgcaaaatcaacTAGTCAAATGCGATCCAAG
ACACGGCAAATACATGGCATGCTGTTTGTTATACCGTGGTGATGTTGTTC
CTAAAGATGTCAATACAGCTATCGCTCAAATCAAAACCAAACGTACCATT
CAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCGGTATCAACTACCA
AGCACCATGTGCTGTCCCTGGAGGTGATCTTGCTAAAGTTCAACGAGCCG
TCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGCTTGGGCCCGATTG
GATCATAAATTCGATTTGATGTATTCGAAACGCGCTTTTGTTCATTGGTA
TGTTGGCGAAGGTATGGAAGAAGGTGAGTTTTCAGAGGCTCGTGAAGACA
TGGCTGCCCTTGAAAAAGATTATGAGGAGGTTGGAACGGATTCTATTGAT
GAAGATTACGATGAACAAGAAGAATACTAAATGCGTGAGTGTATTTCAGT
ACATGTTGGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGGAACTCT
ATTGTATTGAGCATGGCATCACACCAGATGGACGTATGGATACAAACGGA
GGAGGATCAAATCCGAATGATGATTCTTTCAGTACATTTTTCAGTGAGAC
AGGCGCTGGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTGAACCAT
CAGTTGTCGACGAGATCAGAACTGGAACATACCGTCAACTGTTTCACCCT
GAACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGCTCGTGG
TCACTACACTGTTGGCAAAGAATACATCGACCAAACATTAGACCGTATCC
GCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATCTTCCAT
TCATTCGGTGGAGGAACCGGATCTGGTTTTTCCTCCCTCCTTATGGAGCG
TCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTATCTATC
CGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCGATCCTT
ACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATGGTTGATAA
TGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGAGCGACCAA
GCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCAATTACA
GCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGAGTTTCA
AACTAACTTAGTCCCATACCCCAGAATACATTTTCCAATGGCGACATACG
CTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACTGTCAAT
GAAATCACAAGCGCTTgctttgacccgcaaaatcaacTAGTCAAATGCGA
TCCAAGACACGGCAAATACATGGCATGCTGTTTGTTATACCGTGGTGATG
TTGTTCCTAAAGATGTCAATACAGCTATCGCTCAAATCAAAACCAAACGT
ACCATTCAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCGGTATCAA
CTACCAAGCACCATGTGCTGTCCCTGGAGGTGATCTTGCTAAAGTTCAAC
GAGCCGTCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGCTTGGGCC
CGATTGGATCATAAATTCGATTTGATGTATTCGAAACGCGCTTTTGTTCA
TTGGTATGTTGGCGAAGGTATGGAAGAAGGTGAGTTTTCAGAGGCTCGTG
AAGACATGGCTGCCCTTGAAAAAGATTATGAGGAGGTTGGAACGGATTCT
ATTGATGAAGATTACGATGAACAAGAAGAATACTAAATGCGTGAGTGTAT
TTCAGTACATGTTGGACAAGCCGGTGTCCAAATTGGCAATTCTTGCTGGG
AACTCTATTGTATTGAGCATGGCATCACACCAGATGGACGTATGGATACA
AACGGAGGAGGATCAAATCCGAATGATGATTCTTTCAGTACATTTTTCAG
TGAGACAGGCGCTGGCAAACATGTTCCAAGAGCTGTATTCATTGATCTTG
AACCATCAGTTGTCGACGAGATCAGAACTGGAACATACCGTCAACTGTTT
CACCCTGAACAACTGATCACCGGCAAAGAAGATGCGGCTAACAATTACGC
TCGTGGTCACTACACTGTTGGCAAAGAATACATCGACCAAACATTAGACC
GTATCCGCAAACTAGCCGATGCTTGCCGAGGATTACAAGGATTCTTGATC
TTCCATTCATTCGGTGGAGGAACCGGATCTGGTTTTTCCTCCCTCCTTAT
GGAGCGTCTCTCCGTTGACTACGGTAAAAAATCAAAGTTGGAATTCGCTA
TCTATCCGGCACCACAAGTATCCACTGCCGTCGTAGAGCCTTACAATTCG
ATCCTTACAACTCATACAACGTTGGATCATACAGATTGCGCTTTCATGGT
TGATAATGAAGCCATTTACGATATCTGCAAAAAGAACTTGGACATTGAGC
GACCAAGCTACACCAACTTGAATCGATTGATCAGCCAAATTGTCTCCTCA
ATTACAGCTTCATTAAGATTCGACGGCTCATTGAATGTTGATTTGACTGA
GTTTCAAACTAACTTAGTCCCATACCCCAGAATACATTTTCCAATGGCGA
CATACGCTCCAATCATTTCAGCAGAGAAAGCTTTTCACGAACAAAATACT
GTCAATGAAATCACAAGCGCTTgctttgacccgcaaaatcaacTAGTCAA
ATGCGATCCAAGACACGGCAAATACATGGCATGCTGTTTGTTATACCGTG
GTGATGTTGTTCCTAAAGATGTCAATACAGCTATCGCTCAAATCAAAACC
AAACGTACCATTCAATTTGTTGATTGGTGTCCAACTGGATTCAAAGTCGG
TATCAACTACCAAGCACCATGTGCTGTCCCTGGAGGTGATCTTGCTAAAG
TTCAACGAGCCGTCTGTATGTTGTCTAATACAACTGCTATCGGAGAGGCT
TGGGCCCGATTGGATCATAAATTCGATTTGATGTATTCGAAACGCGCTTT
TGTTCATTGGTATGTTGGCGAAGGTATGGAAGAAGGTGAGTTTTCAGAGG
CTCGTGAAGACATGGCTGCCCTTGAAAAAGATTATGAGGAGGTTGGAACG
GATTCTATTGATGAAGATTACGATGAACAAGAAGAATACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045225XLOC_045225Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072878-proteinTCONS_00072878-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072878-exon-scaffold_86-1491911889:430254..430394TCONS_00072878-exon-scaffold_86-1491911889:430254..430394Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:430254..430394TCONS_00072878-exon-scaffold_86-1510915933:430254..430394Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:430254..430394TCONS_00072878-exon-scaffold_86-1575043694:430254..430394Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:431035..431259TCONS_00072878-exon-scaffold_86-1491911889:431035..431259Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:431035..431259TCONS_00072878-exon-scaffold_86-1510915933:431035..431259Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:431035..431259TCONS_00072878-exon-scaffold_86-1575043694:431035..431259Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:431694..431880TCONS_00072878-exon-scaffold_86-1491911889:431694..431880Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:431694..431880TCONS_00072878-exon-scaffold_86-1510915933:431694..431880Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:431694..431880TCONS_00072878-exon-scaffold_86-1575043694:431694..431880Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:435362..435444TCONS_00072878-exon-scaffold_86-1491911889:435362..435444Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:435362..435444TCONS_00072878-exon-scaffold_86-1510915933:435362..435444Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:435362..435444TCONS_00072878-exon-scaffold_86-1575043694:435362..435444Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:437230..437455TCONS_00072878-exon-scaffold_86-1491911889:437230..437455Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:437230..437455TCONS_00072878-exon-scaffold_86-1510915933:437230..437455Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:437230..437455TCONS_00072878-exon-scaffold_86-1575043694:437230..437455Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:438515..438619TCONS_00072878-exon-scaffold_86-1491911889:438515..438619Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:438515..438619TCONS_00072878-exon-scaffold_86-1510915933:438515..438619Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:438515..438619TCONS_00072878-exon-scaffold_86-1575043694:438515..438619Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:439884..440430TCONS_00072878-exon-scaffold_86-1491911889:439884..440430Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:439884..440430TCONS_00072878-exon-scaffold_86-1510915933:439884..440430Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:439884..440430TCONS_00072878-exon-scaffold_86-1575043694:439884..440430Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:440789..441144TCONS_00072878-exon-scaffold_86-1491911889:440789..441144Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:440789..441144TCONS_00072878-exon-scaffold_86-1510915933:440789..441144Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:440789..441144TCONS_00072878-exon-scaffold_86-1575043694:440789..441144Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:441856..441923TCONS_00072878-exon-scaffold_86-1491911889:441856..441923Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:441856..441923TCONS_00072878-exon-scaffold_86-1510915933:441856..441923Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:441856..441923TCONS_00072878-exon-scaffold_86-1575043694:441856..441923Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1491911889:442769..443476TCONS_00072878-exon-scaffold_86-1491911889:442769..443476Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1510915933:442769..443476TCONS_00072878-exon-scaffold_86-1510915933:442769..443476Clytia hemisphaericaexon
TCONS_00072878-exon-scaffold_86-1575043694:442769..443476TCONS_00072878-exon-scaffold_86-1575043694:442769..443476Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:430254..443476 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0825013 0.0514715 0.0695546 0.150478 0.367623 0.392924 0.560442 0.611926 0.495815 0.574722 0.758504 0.537715 2.74818 2.10492 1.21344 1.27895 49.8414 84.2483 2.14084 2.08795 75.4733 77.6856 15.7629 23.4798 40.437 42.1141 9.37874e-07 0.93006 0.331266 0.604387
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000217Tubulin
IPR002452Alpha_tubulin
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR003008Tubulin_FtsZ_GTPase
IPR017975Tubulin_CS
IPR008280Tub_FtsZ_C
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0003924GTPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0005874 microtubule
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
Blast
BLAST of TCONS_00072878 vs. Swiss-Prot (Human)
Match: TBA1C (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 390/443 (88.04%), Postives = 419/443 (94.58%), Query Frame = 1
Query:  634 MRECISVHVGQAGVQIGNSCWELYCIEHGITPDGRMDTN---GGGSNPNDDSFSTFFSETGAGKHVPRAVFIDLEPSVVDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEYIDQTLDRIRKLADACRGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIXXXXXXXXXXXCAFMVDNEAIYDICKKNLDIERPSYTNLNRLISQIVSSITASLRFDGSLNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAFHEQNTVNEITSACFDPQNQLVKCDPRHGKYMACCLLYRGDVVPKDVNTAIAQIKTKRTIQFVDWCPTGFKVGINYQAPCAVPGGDLAKVQRAVCMLSNTTAIGEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDS 1953
            MRECIS+HVGQAGVQIGN+CWELYC+EHGI PDG+M ++   GGG    DDSF+TFFSETGAGKHVPRAVF+DLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE ID  LDRIRKLAD C GLQGFL+FHSFGGGTGSGF+SLLMERLSVDYGKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTL+H+DCAFMVDNEAIYDIC++NLDIERP+YTNLNRLISQIVSSITASLRFDG+LNVDLTEFQTNLVPYPRIHFP+ATYAP+ISAEKA+HEQ TV EIT+ACF+P NQ+VKCDPRHGKYMACCLLYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQ P  VPGGDLAKVQRAVCMLSNTTA+ EAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG DS
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGG----DDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 439          
The following BLAST results are available for this feature:
BLAST of TCONS_00072878 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBA1C0.000e+088.04Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C P... [more]
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