TCONS_00072871 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072871
Unique NameTCONS_00072871
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2744

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072871 ID=TCONS_00072871|Name=TCONS_00072871|organism=Clytia hemisphaerica|type=transcript|length=2744bp
gcattttgaattatcaatctagaaactttcaaatacatctctgaaaaatc
tgcaactcttcaaaacaaaacttctggatcgaaaatgatcgaaaatgcTT
CTCTGTTTTgcttttgtgtgaatattttcgaatgttttattgttcgaatc
taacgttcgaattagattttcgaatagaaacattcgaaactacacagaag
aaagaagcaaggcggaagtaagttttaaaacaaaaacaaaaagaaattta
tatcaggacaatttttttgagtcgacaataaNNctcgatattttactcgt
tccgagattttaccgatatttttcctcgcctaaaggctctgaaaaatatt
acggaaaaatctcggaactcgtaaaatatttctcgtattgcactcgaagt
catgcgataactagtacttattgctatctagctttcatcatcaggtaggt
tcATTCAGTATGTTGCTTGttaaatctggtacggcgaacgAGTGAATTTA
AGCGActttttaccgacgaagaggaaaatttcgggattttttgtgaaaat
ctgcgCCGTGTTTGTGTAACCTTTTCAACATGTTACCAGAACAGTGAAAC
TTTTAAACTGTAAATCtattttttattgaataatAATATGTAGCACCGCC
CAGCGACCACCACACAAATTGTGTTGAATtgatttttaacttttcgaaaa
aACTGTACGAAAACTTAATAAACAAAACTTCTAAGCTCTTGAATGACTAA
TATGAAAAAGTGTAATCTGAATTCTGTATAATGCATTTAAGACTATGAAT
AGGCTCTTTATAATAAGTTAGTCTTGAATCCAAGCGCTGATGAATTGGCA
TATTCAAGCGACTATTGAATGAACTATTGATCTCTCAATTCAGAGTATTG
AATAAAATCTGGTACAGAATTTggcaaagattttcttttgagaAAATAAA
GCGTTACTTTGTTTTGCTTACATTTCTTGCTTGGTTACATCTTctcgttt
atttaattttttctgaattttagtgGTTTTTGTGCGATAATACGAAAATA
tctttttctgtttcaaagACCTTACAAACAAGATGGGTTGGCCATCAAAG
GCTGTTATAAAATGATATGATTGAAGATTGGATTAAGACCTCGTGTACCA
ACTCACATTTGTCATGGAAACCCACGTCTATCAGATGGAGAAAACGGCCT
CAAGATAGTGTGAAGGATTTAGTGGAATGGTGTCGTGATAATGTTTATGA
TTGCTCAATGAGTGTTCCCGCTGTTggtgtttcaaagaaaaatggtGGCA
ATGGTATCGTATATCATGAACCTTTTGCTGCGCTTTACAAGGTACCAGAT
GTTGTTTACGTTACAGTCGAAGGTGAAACATGGCGAAATGCAATCGATAG
TTTCAGCCAATCAGTGATCAATTTATGGCCATTTATCATGCTTTGTTTAT
TGTGTGCTTTCATCTCTGGTGCTATTATTTGGTTTCTGGATACATGGACA
AATGATCAAGATTTTCCTCGAGCATTTTTCAGCGGCACTTACCACGGATT
TTGGTGGAGTTTTGTTTCCATGACAACCGTAGGTTACGGAGACAAGGCAC
CTGTATCAATCGTTGCTCGAAGTTTTTCTGTTATCTGGATAATTATTGGC
ATTCTCATGATTTGTATTTTGACGTCACTGATGTCCAATGGTCTTTCTGC
TGCTATTTATGTTCCTGAAAAAGTTGTCGTCAAAGCCAAGGTCGGAGTTT
TACCAGGGATTGAAACTGGAGACATCATTGTCAATGAGTTGGACGGAGAA
GTGAAAATGTTAAAAGATATAATCGAACTTGAAAACTGGTTAGCAAGAGG
TCTATTAACTGGATTTGTTATGGACATGTACACCTTCCAACACCATTATG
AGGAACGCTTATCCAAACTCAATGTGAAATATGTTGTAGAAAGAAGATTC
CCAATGGAAGATTACCATTACGGTATTGCTTTTCACCACATGGATCGTCG
AAACCCTCGATTGGCCAGCAAAGAAACATGGAGAACTTGCCTGGAAGATT
ACATCGAATATAATTATCATTTCAAAGAGAAAATGGAGAGACATTACAGA
CAATCGGTTTTGGCAAATCTCGACCCAGCTCTCTTGAAGCCATCTGAATC
ACCACCACTTGATCTTTTCGACATTAACTCTGGCTTTTTCCAAACCATCT
TATATTATGTTCTTGGTACTGCTGCAACAATCCTCGTAATCGGTTTGATC
TACGAATTTTTCCGTTTGGTCTTCTTCGGTGAGAATGGAATTGATTTTAG
CCAGAAATTGGGATTGGCTCATAATGCAGGTTACACGGCAGACGGAGAGA
GTGCAGAGCAAGCGAAAACAGATTCACCCAACAAAAAGATGACACGTGAG
GAGAGACAAATGGCCGAGTTGGTGGAACAAAGCATCCAGCGAACAGAGGA
TAAAATGCAAGGCGTTGAACGAGATGTCAAGAATGAGATTCGGGAAATGG
TTCGATCTATTCGTCGTCAAATCCACGAAATGAAACGTAAACAAGATAAA
GACTATGGGTTGTGAGCCATAATATTCTCCTCAATTCATGAaaattatga
cgtaatgttttctacgaaaATACCCCGATTTTTGCCAGTAGTAGCATTAA
ACATTGCatcataaatatcatgaatGGGGTGTGTCTAAATTTaaatagcg
caccgcgctgaatctaaaaatagattttatttttgacataatNN
Run BLAST on NCBI

transcript from alignment at scaffold_86:365635..376396+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072871 ID=TCONS_00072871|Name=TCONS_00072871|organism=Clytia hemisphaerica|type=transcript|length=10762bp|location=Sequence derived from alignment at scaffold_86:365635..376396+ (Clytia hemisphaerica)
gcattttgaattatcaatctagaaactttcaaatacatctctgaaaaatc tgcaactcttcaaaacaaaacttctggatcgaaaatgatcgaaaatgcTT CTCTGTTTTgcttttgtgtgaatattttcgaatgttttattgttcgaatc taacgttcgaattagattttcgaatagaaacattcgaaactacacagaag aaagaagcaaggcggaagtaagttttaaaacaaaaacaaaaagaaattta tatcaggacaatttttttgagtcgacaataaNNctcgatattttactcgt tccgagattttaccgatatttttcctcgcctaaaggctctgaaaaatatt acggaaaaatctcggaactcgtaaaatatttctcgtattgcactcgaagt catgcgataactagtacttattgctatctagctttcatcatcaggtaggt tcATTCAGTATGTTGCTTGttaaatctggtacggcgaacgAGTGAATTTA AGCGActttttaccgacgaagaggaaaatttcgggattttttgtgaaaat ctgcgCCGTGTTTGTGTAACCTTTTCAACATGTTACCAGAACAGTGAAAC TTTTAAACTGTAAATCtattttttattgaataatAATATGTAGCACCGCC CAGCGACCACCACACAAATTGTGTTGAATtgatttttaacttttcgaaaa aACTGTACGAAAACTTAATAAACAAAACTTCTAAGCTCTTGAATGACTAA TATGAAAAAGTGTAATCTGAATTCTGTATAATGCATTTAAGACTATGAAT AGGCTCTTTATAATAAGTTAGTCTTGAATCCAAGCGCTGATGAATTGGCA TATTCAAGCGACTATTGAATGAACTATTGATCTCTCAATTCAGAGTATTG AATAAAATCTGGTACAGAATTTggcaaagattttcttttgagaAAATAAA GCGTTACTTTGTTTTGCTTACATTTCTTGCTTGGTTACATCTTctcgttt atttaattttttctgaattttagtgGTTTTTGTGCGATAATACGAAAATA tctttttctgtttcaaaggTATGTATCCTTGCtgttttacttttatttta gtccattctttctttttgagttttgtggTAAAGGAAACAAAACAGAAATA AATTTTACTGTGGagactctttaactcgaacttctataactTGAATGTTT CCATACCTCGAAGTCTTcataattcgaacaagttttgACTTGTGGAGACA TTACTATAgttgcccagctggcacacaacgttgtttcaaaactcatctaa cgttatatggacgttgtgaccgttagataaacgttgaaagaacgttgtgt gccagctgggtgttTTACTTTCACATCACATTATCCACCCTTgtattttt ttacagaaaacgGCTTTTTCAAGACCatgcttaaaatattttttgctgat ttgtgTGTTTGAATCAAGAAAATTTGCGAATATTTTGTGActtgtaaaat tttatttaaaaaaggaaGCATTCGTTTCTCAAGTAAAGATTGAATGGGTT AAATCTTAAAATGTACTTTCTGGCCGAGGAAAATTCATCCCACGCTAAAA ACACTCATAACATAATTACGTTATTTTCTATCTTTAGACCTTACAAACAA GATGGGTTGGCCATCAAAGGCTGTTATAAAATGGTGGGCTTTTTTTCATA TGGTTACTTTCATACTCATCAAAGACATCCAATCCATTTCTGAATGTCAA TTCTATTATTGGGAAGTTAATCAAACATTACATAACGGTGGAACAAGCTT TGGACAAAACCAATGTAACAGGAGATCCGGTGGCGCGGAAGATACGAATT TTCCaagatttgaaatttcctgGATCCCAGCTCCCCCATACTTGATTGAT GATGAAGGCAGTGACACACCGAAGGGATTTTTTTTCGGTATATATTTCTT GTTCCCTTCTACTGATCATATACTTACGACCGAAATGCTGTTTTggtgtt ttaaaaaaaatgtacaagTTTGAATTAAGATTGTGATAAAACTAAAACAT TTATAGTCTCTTGTGGCGCTTTTTCGAAAGagatttttttcgaatgttCT TCCTAACTTTTGATCACGTGAATCAagcttgtacacttttttttgaaaca cacGGTATGACAAGAATGAAGCTTGAAGTGTCAATCAATGGTAATGTCAA ATTTCTGATGAAGCCCGAATTTcggaaaaaatatctttttgggcaatttg ttgttttttttgattaattttaggTATGATCCACGTTTTAAGTTTCAGCT TTATTAACCCATTTTTTCATTCTGATATCAATATCACAAAATTTCTACTT CGAAATAAACTCCATGCTTTTTTCACAAATGACGTAATTTTGCATAAAAA CCTGGCAGAATTTTAATTGAAATCGTACATTACCAAGACAGACTTATACA TGAACGATGCCACTTGAAAAAACatgctttttttctttttttgaaaatgg ccTTGAAATCAGTCAAAATCCGTGTTATATCTTACATTGTTAGTGATTTC TGACATAACGGAGCTTTGATCAAATTTCGCTCTCGTGTTCTTTGAATAAA TCGTCTATTTATTTAGACGTTTTATaagaaaaagagcaaaatatattaac agggttcccagcggtcagggaaaacctggaaaacctggaaaagtcaggga atatttgtaaaatctctcaaaagtcagggaaaagtcagggaatttTTTTC AGAATGCCTTGAATTTGATGGTTTTCAGGCAATCTTTGAATCTCCACCca ccaaccatggtgggtcctccAAATGATCACATTAATTACTAAAATCAGCA CACTTTGACTATTGCAAAGCTGACAgggttatttttgaaaagcgCGATAA TTTCTTTACTACAACACGAAAAATTTGCCGTTTTTGGTCAGGGCAAAATG GTCTTTTTTCATCTTGAGTCAGGGAAAAACTACCCTTTTCAACAGTTTTG TCAGGGAAAAAGGGTGGATTTTAAAGCCAAAGTCAGGGAAAAACTACCCT TTTCAACAGTTTTGTCAGGGAAAAAGGGTGGATTTTAAAGCCAAAGTCAG GGAAAATCTGGGGAACTGCTGGGAAccctgtataagaacataaggcttcg gtggccaaaatattaagaacaagttaagaacattttaaggcattgcagac tctaaaacattcaatttattagaaaaatggacaaaaatactcacaaaatg gtgaaaactcaagaacatgttaagaacatttttagacttaaaacttaaaa agttaagaacttccatggccttcaaaaattctgaatgttctttataaaaa ctGGTATTAATTAATTGAATTGctgatacacttttttttttataagaacc agtaaatttttgttgaggctcggctgttcttatttttttggcacttcaaG CCTCAAactgttcttatcctgttcttatttttagggctaatttgggggta tttttgggtttgaacccaaatttcattaatttggcccttattttacctaa aactcagcaactccaggctcaggattgttcttaaattgttcttatttttt ggcatttttgagcctcattgttcttataaaaaaaaaagtgtagtaaaaaa atcacttttcattCATACCAGATATGATTGAAGATTGGATTAAGACCTCG TGTACCAACTCACATTTGTCATGGAAACCCACGTCTATCAGATGGAGAAA ACGGCCTCAAGATAGTGTGAAGGATTTAGTGGAATGGTGTCGTGATAATG TTTATGATTGCTCAATGAGTGTTCCCGCTGTTggtgtttcaaagaaaaat ggtGGCAATGGTATCGTATATCATGAACCTTTTGCTGTGAGTGCAATTTT AAAGTATCTTGTCTTTGAGTAGAGATATTTTGTGTTACGTACCAaaatga acatataaacgactggacatccatctccttttgCATTTCTGCAGAAAGCA CTGCTAGCATCATcgccgcctcgttaaaaacataaaatgaaacaatagat ttttattGTGTAACTCTTGGGAAAATCACACAACAGTCCTACATACTTTT ATatctgtttttttattttactatttttccggacaccctgtgtATGAATT CTGTTccgatttttttttcggacaagCTATATGACACAGGTATCTCAACT TTTCTTGCAGGCGCTTTACAAGGTACCAGATGTTGTTTACGTTACAGTCG AAGGTGAAACATGGCGAAATGCAATCGATAGTTTCAGCCAATCAGTGATC AATTTATGGCCATTTATCATGCTTTGTTTATTGTGTGCTTTCATCTCTGG TGCTATTATTTGGTTTCTGGTAAGCCTTCTCTTTTTACCACACCCCTGTT TCGTTCAGTGTAATAgcactatttttttttttaattactcAAGCGCTCTT CTCGTTTAAccttttacatgttttttttataagcataacgtttataaaca TACCAAGACCTGAATTTGTcgaaaaaataagcatattacaagcatattac TGAGCTTGCTTTTGAGGTTTCTTCAAACggcattttaatttaaaaaaata caagcGTAAACGCGGCAATCGTCTACAACTTTCCTGAAAAATCTTTGTGT CATTACTTATTTCCCTATCCTCATGTATAGCAACGGCAGATTTTGGAAAA GTTGGagaaaaataagcatatgataAACATACTTCGAGCCTGAGTCTATA ATATCTCTAAGCATAACTGAGCTTGTTTCCCAAAGCAAaaaacatatgct tataaaaagaaaaaacatgtatttcaacagtttaaaaaactttttttgtt tgcaaaatatcacagaaaaaaatatgaaaaaacttCCAGAAAAAACATTG TGTTATCCAACAGTTGGTGACAACATTTCTGTCATacaagttttttactt tttactaaTGATGGCACTCTGATGAGGCCGAAACGTTTAAAGAAAATACA GTAGACTTTCGGTTATTCGAACCTCCAGGGGGGGTGAGATTTtacttcga ataactgaaaaattcgttttccCGCCAGATTCTCAACTTAACCTTAATTG GGTGGACTTTCCTGAAGTAATTGAGGTATTGTGGTCCAATTGAGCGtaat aaacacaaagaaattgcTTAAATAGCGATATGTAGCCCTGAATATTGAAA CctgatttttaaaggaaaattattgTTCTCACTCGACGATCTCCCaataa gaaaaattcgaataactgAGGGTGATTTAGCCTATAATGTACCCCAAGGG GAATAGAAATCGCTTCGAATAATTGAAAGTTCAAATAACTGAAGTTCGAA TAACTGAGAGTGTTTTTGCCTAGGTTGAGTAAGCAGATCCAAGAGGAACG CCATCTCACTTCAAATAGCCGAATTATTCGAATAAGTGCATGTTCGAATA ACCGGAAGTCTACTGTAATTCAAGTTTAACATAGAACAAGAATGAAGCTT CCGTGtttgaattttatttgaaaaatatttctttcatttctaGGATACAT GGACAAATGATCAAGATTTTCCTCGAGCATTTTTCAGCGGCACTTACCAC GGATTTTGGTGGAGTTTTGTTTCCATGACAACCGTAGGGTTAGTATGGAT CTAATCTCGTAACTGATCATCAATTCTGCGCAAACGTCGTTTTTCGGCCG AAACAGTCAAATCCACGGTTCTTTTTTAATAAAGTTATTGNATCTCGTAA CTGATCATCAATTCTGCGCAAACGTCGTTTTTCGGCCGAAACAGTCAAAT CCACGGTTCTTTTTTAATAAAgttattgttttttgttttgttttaaccAA TCACTActctcaaaagctcatttaatattcattctAAATCTGGATGAAAG AGATCAAAGCGTTGCGCCAACCTGGACCAGGTTCTCGTACAGAGCCATGT CTTTTAGAGTGAATACGTGTCATGCGcggagtatcagaatctgctcggag ataAGTATGAATCgatctataattcgaacaatcGTCTTCTCTGTAAACGT CCTGGTTTTGTTAGtggtggcaaatttaaactagactaaaagttattttc aaaattttcaccaCTGGCAAAGAACTTGCTTCTGGCTTCATGACGTATAT TTTTCTACAGAAAAACTACAGCTTTTGCCGGTTGTGGCAAAAAACTTGGG TTTTTCCGGTTAAACATTTTATGAATATCATGAGTTGCCAATCTAAACTA CTTTTATTCGAAAGTTCGTGCAATTGGAACGGCTACTGGTTACATTCAAC ATGTGATAttcaccactgcaatgtcttctgacattacatcatggacccaa cagctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttcaa ccaatcagctgttcggtccgtggaagacattgcaatggtgcatatcatga atacgctgtaagaaccagtaaattttacCTCGATTTTTGTTACCATAGTT ACGGAGACAAGGCACCTGTATCAATCGTTGCTCGAAGTTTTTCTGTTATC TGGATAATTATTGGCATTCTCATGATTTGTATTTTGACGTCACTGATGTC CAATGGTCTTTCTGCTGCTATTTATGTTCCTGAAAAAGTTGTCGTCAAAG CCAAGGTATTGTTTAGACCATTTTTATTACTAAATATGTAAGGTGCATat atagactagtaaaccacggtgttgtatttcgctgcagcttACGCTTTGCA ATAGGCTCACTATGTTTGCTGAATACATGTCTTTCCAAATCACTCTCCCG CggtaatttctatttttataaaCACTATTTttcgcgttcctgtgtccaag aaAAGACAGAcgcttttttcaaaatggctgacTTTTCTTAACTCAACCTT GTGAAAAATTGTTGATCCTTATGAATAAGAGGCTTTCTCGCTGTAAAGAT TATGTTTTGATAATCAAAATGAGAATGCTTTGTGGTAATTtcaggggggg tcatgcagttggtACCCGACATCATGATGTCTAactgcaaaattgaaaat ttgagcgtACACCCACCACCCCTTAGCAGTTAGTACCCAAAAATACTAAG TGTATTTGACAATTGACAGGTTGACACCACCCCTATTTGCTTAGTACCCT GAAGTACTAAACGCATCTGACTACCGGAAGGCTGACACCACCCCTATTTG CACCTAGTATCCTGCAGTACTAATTGCATTTGACTATTGACAGGTTGGTA CCACCCCCTATCCTGCCGGTTTAATGTTCTTGAGTAATTGCTGGCACTCA GGGTAATCAATATTTGAAACCTGTCAGTACCTAACTAACCTTGGTGATTT TTCTCTATTTGATTTATTATAATAAATACAAACCCCAACATATATGGTAC AAATCTGCAAAGCCTAACATGTTAAGTAAAGTCTGCCCACCATATTAGGT CTAAAGTCCCAGAAATAAAATATCACTTTTGCATTGTTTGACAAACGACT AAAAAAAATGGCTGACAAGCACAGCTAACAAAACGTAAATCATAATGACG TAATTTAGTAGCGGCacacaatttcaaaacaagaaaccTTATGGGATCTG ATGGGATTTAGATTCAAGCTTTGGTAAGTCTTGAGAGAGAAATAATTAAA GCTCCTACATTGAAAAAGGCTATTGATATGGATAAGACCAGTCTTTTTTG CAGTTACTACCCTAGAATTACCATttgattgacttgaaatttatgAGACA CTACCCCTCatagcagttagtaccctaaaagtaccatttgattgacttga aatttatgAGACACCACCCTATACACAGCAGTTAGTACCCACAAGGTACT AACtgcaaattccaaaaatgatatAAGACCCACCACGGTaccaactgcat gaccccccccccctggtaaTTCGTTTGTTTCGGAAGAATTGTTTTTTACA AAGAAAAGGGAAACATGAGATTATTTAGTGATTTTTTCTTGTTTAGGTCG GAGTTTTACCAGGGATTGAAACTGGAGACATCATTGTCAATGAGTTGGAC GGAGAAGTGAAAATGTTAAAAGATATAATCGAACTTGAAAACTGGTTAGC AAGAGGTCTATTAACTGGTAAGAAAAAACAGTCCATCCAGAATCCTTTCC AGTATTGGgaaaaaaatattcgaatcCTTTTTCTTCTTGGTGTTAAATTA ATTTCTTGCTCACTTGTGAGACaattttatcgttttttaaAAGAAGACAG GTATAATGCTTGGAGTTTTTGTTCATAAAATGCGATTGAACATTCATTTT TCCAGGCACCGAAATTCACGGCAAAACTGCCAAAGTCAGCACACGCAATC ATGTTTTCTTTATCTCTTTGAATAGGATTTGTTATGGACATGTACACCTT CCAACACCATTATGAGGAACGCTTATCCAAACTCAATGTGAAATATGTTG TAGAAAGAAGATTCCCAATGGAAGATTACCATTACGGTATTGCTTTTCAC CACATGGATCGTCGAAACCCTCGATTGGCCAGCAAAGAAACATGGAGAAC TTGCCTGGAAGATTACATCGAATATAATTATCATTTCAAAGAGAAAATGG AGAGACATTACAGACAATCGGTTTTGGCAAATGTAAGCCTTTACTAAGCA TAAAATATGCTTTTCCCCTATTATTTCAATCACTTCATTTATCATCCCGT CATCACTTCGGTCTAAATCGCAGACCACTATAGATACTtgaatctctcta attcgatttcaaGGGGGGTTTTTCATCGAATGAGGAACGGTATCGAATAG AGGACCGTCTTTTATGAGAgcttcttgttgacggtgattGTATCAATATA GTATTGAATAGTAATACGTCGACTAGATAATAGTTGAAGCTTATCACCAC TTGAGTCTTATGATTAAGCCGGTGGTTTTGAATTCTaaaatcccacaatt caatttTAGCTCGACCCAGCTCTCTTGAAGCCATCTGAATCACCACCACT TGATCTTTTCGACATTAACTCTGGCTTTTTCCAAACCATCTTATATTATG TTCTTGGTACTGCTGCAACAATCCTCGTAATCGGTTTGATCTACGAATTT TTCCGTTTGGTCTTCTTCGGTGAGAATGGAATTGATTTTAGCCAGAAATT GGGATTGGCTCATAATGCAGGTTACACGGCAGACGGAGAGAGTGCAGgta caaacttttttctttttataagaactattaAATAGTCGTTCAGTCTCGTC TGTtcttattttggaattttttaaaagcaGGAACGTTCAGTTTTCTTTAC TCTGAGGTTGAGTTTTTAAATAATGGAGTGAGAAATTTcgcttttcttta aagtttcgGAATAATATCGGGCAACGTTCAAGGATTGAGCCATGTCATGT CACAATCATGCCGCTTTCAATTTTTGCCTTCATAATTTgttgtaaaatct tttttttggtaaatttgtTAGTTGATTTTTTCCTACTCTTCTCCCCTATC AAAAATCGGTTAAATTGGATAAATGATGGTATTCATAAAAATCATGGTTT CTTAGTGCGCCTGGCATTTTTAAACGTTTATTTCCAGTGAAAATATTCCG CCATTGAAAAGGTTGTCAAATTAAGGATGGTTTCATTTCCGAATGCGATT CGAAATGCAGCTCGAAAGGGATTTTGTTatagaaaaataataacaccgtc acactggtttgtagaggttaaaataccggcataatgacaaaaaataaggc tatATACATTCACTGTCTGATTTTAATATACCGTTtccccgtctcttttt tcgtcaaatttaCGGTATTACGGAATTtaggccaatcccgtcacaccatA AAAGTACAACTCCCCCGCCactttagactggagtcgtttataatgcgtgt aatactaataataccaatactaataataataacaataataatacgggatt tagtttgtataaacgactggaagaatccggtgttcgaGCCTTATAGAttc aggggctagctacgcagaaacttgcgtagcgagaaaacaatttatcaagc aacaacaaactctcaaaacgaaatcaactcaaatgaaaaactttcaatac acaaatccacactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNagaattattttgagcaggaaaaaattataattgcaatattgacact tttcttttgtttggagttagtgcacaaaggtttctagacgactaaaattg ttccgccctttattactttttgctttatttctactatgtatgaattagtc gtctagcttgctagactaccgCCACTTCGAAGGGTTTAAATACTCATTCT TTTCTCTTTCTATTCGATTCACAGAGCAAGCGAAAACAGATTCACCCAAC AAAAAGATGACACGTGAGGAGAGACAAATGGCCGAGTTGGTGGAACAAAG CATCCAGCGAACAGAGGATAAAATGCAAGGCGTTGAACGAGATGTCAAGA ATGAGATTCGGGAAATGGTTCGATCTATTCGTCGTCAAATCCACGAAATG AAACGTAAACAAGATAAAGACTATGGGTTGTGAGCCATAATATTCTCCTC AATTCATGAaaattatgacgtaatgttttctacgaaaATACCCCGATTTT TGCCAGTAGTAGCATTAAACATTGCatcataaatatcatgaatGGGGTGT GTCTAAATTTaaatagcgcaccgcgctgaatctaaaaatagattttattt ttgacataatNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045222XLOC_045222Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072871-exon-scaffold_86-1491911889:365635..366702TCONS_00072871-exon-scaffold_86-1491911889:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:365635..366702TCONS_00072871-exon-scaffold_86-1510915933:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:365635..366702TCONS_00072871-exon-scaffold_86-1575043694:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:367272..367317TCONS_00072871-exon-scaffold_86-1491911889:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:367272..367317TCONS_00072871-exon-scaffold_86-1510915933:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:367272..367317TCONS_00072871-exon-scaffold_86-1575043694:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:369306..369520TCONS_00072871-exon-scaffold_86-1491911889:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:369306..369520TCONS_00072871-exon-scaffold_86-1510915933:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:369306..369520TCONS_00072871-exon-scaffold_86-1575043694:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:369845..370003TCONS_00072871-exon-scaffold_86-1491911889:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:369845..370003TCONS_00072871-exon-scaffold_86-1510915933:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:369845..370003TCONS_00072871-exon-scaffold_86-1575043694:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:371178..371272TCONS_00072871-exon-scaffold_86-1491911889:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:371178..371272TCONS_00072871-exon-scaffold_86-1510915933:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:371178..371272TCONS_00072871-exon-scaffold_86-1575043694:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:372133..372289TCONS_00072871-exon-scaffold_86-1491911889:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:372133..372289TCONS_00072871-exon-scaffold_86-1510915933:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:372133..372289TCONS_00072871-exon-scaffold_86-1575043694:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:373631..373751TCONS_00072871-exon-scaffold_86-1491911889:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:373631..373751TCONS_00072871-exon-scaffold_86-1510915933:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:373631..373751TCONS_00072871-exon-scaffold_86-1575043694:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:374010..374266TCONS_00072871-exon-scaffold_86-1491911889:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:374010..374266TCONS_00072871-exon-scaffold_86-1510915933:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:374010..374266TCONS_00072871-exon-scaffold_86-1575043694:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:374594..374831TCONS_00072871-exon-scaffold_86-1491911889:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:374594..374831TCONS_00072871-exon-scaffold_86-1510915933:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:374594..374831TCONS_00072871-exon-scaffold_86-1575043694:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:376009..376396TCONS_00072871-exon-scaffold_86-1491911889:376009..376396Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:376009..376396TCONS_00072871-exon-scaffold_86-1510915933:376009..376396Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:376009..376396TCONS_00072871-exon-scaffold_86-1575043694:376009..376396Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:365635..376396 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08825 0.91371 1.22452 1.20269 1.70011 1.44825 1.48603 2.33586 1.04321 1.09141 0.953205 1.06907 2.0534 2.02654 1.91798 1.50695 0.996884 1.6154 1.51213 1.53007 2.55271 2.5679 1.62277 1.72221 2.1471 3.71919 3.45827 2.95084 1.35555 1.27655
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072871 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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