TCONS_00072871 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072871
Unique NameTCONS_00072871
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2744

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072871 ID=TCONS_00072871|Name=TCONS_00072871|organism=Clytia hemisphaerica|type=transcript|length=2744bp
gcattttgaattatcaatctagaaactttcaaatacatctctgaaaaatc
tgcaactcttcaaaacaaaacttctggatcgaaaatgatcgaaaatgcTT
CTCTGTTTTgcttttgtgtgaatattttcgaatgttttattgttcgaatc
taacgttcgaattagattttcgaatagaaacattcgaaactacacagaag
aaagaagcaaggcggaagtaagttttaaaacaaaaacaaaaagaaattta
tatcaggacaatttttttgagtcgacaataaNNctcgatattttactcgt
tccgagattttaccgatatttttcctcgcctaaaggctctgaaaaatatt
acggaaaaatctcggaactcgtaaaatatttctcgtattgcactcgaagt
catgcgataactagtacttattgctatctagctttcatcatcaggtaggt
tcATTCAGTATGTTGCTTGttaaatctggtacggcgaacgAGTGAATTTA
AGCGActttttaccgacgaagaggaaaatttcgggattttttgtgaaaat
ctgcgCCGTGTTTGTGTAACCTTTTCAACATGTTACCAGAACAGTGAAAC
TTTTAAACTGTAAATCtattttttattgaataatAATATGTAGCACCGCC
CAGCGACCACCACACAAATTGTGTTGAATtgatttttaacttttcgaaaa
aACTGTACGAAAACTTAATAAACAAAACTTCTAAGCTCTTGAATGACTAA
TATGAAAAAGTGTAATCTGAATTCTGTATAATGCATTTAAGACTATGAAT
AGGCTCTTTATAATAAGTTAGTCTTGAATCCAAGCGCTGATGAATTGGCA
TATTCAAGCGACTATTGAATGAACTATTGATCTCTCAATTCAGAGTATTG
AATAAAATCTGGTACAGAATTTggcaaagattttcttttgagaAAATAAA
GCGTTACTTTGTTTTGCTTACATTTCTTGCTTGGTTACATCTTctcgttt
atttaattttttctgaattttagtgGTTTTTGTGCGATAATACGAAAATA
tctttttctgtttcaaagACCTTACAAACAAGATGGGTTGGCCATCAAAG
GCTGTTATAAAATGATATGATTGAAGATTGGATTAAGACCTCGTGTACCA
ACTCACATTTGTCATGGAAACCCACGTCTATCAGATGGAGAAAACGGCCT
CAAGATAGTGTGAAGGATTTAGTGGAATGGTGTCGTGATAATGTTTATGA
TTGCTCAATGAGTGTTCCCGCTGTTggtgtttcaaagaaaaatggtGGCA
ATGGTATCGTATATCATGAACCTTTTGCTGCGCTTTACAAGGTACCAGAT
GTTGTTTACGTTACAGTCGAAGGTGAAACATGGCGAAATGCAATCGATAG
TTTCAGCCAATCAGTGATCAATTTATGGCCATTTATCATGCTTTGTTTAT
TGTGTGCTTTCATCTCTGGTGCTATTATTTGGTTTCTGGATACATGGACA
AATGATCAAGATTTTCCTCGAGCATTTTTCAGCGGCACTTACCACGGATT
TTGGTGGAGTTTTGTTTCCATGACAACCGTAGGTTACGGAGACAAGGCAC
CTGTATCAATCGTTGCTCGAAGTTTTTCTGTTATCTGGATAATTATTGGC
ATTCTCATGATTTGTATTTTGACGTCACTGATGTCCAATGGTCTTTCTGC
TGCTATTTATGTTCCTGAAAAAGTTGTCGTCAAAGCCAAGGTCGGAGTTT
TACCAGGGATTGAAACTGGAGACATCATTGTCAATGAGTTGGACGGAGAA
GTGAAAATGTTAAAAGATATAATCGAACTTGAAAACTGGTTAGCAAGAGG
TCTATTAACTGGATTTGTTATGGACATGTACACCTTCCAACACCATTATG
AGGAACGCTTATCCAAACTCAATGTGAAATATGTTGTAGAAAGAAGATTC
CCAATGGAAGATTACCATTACGGTATTGCTTTTCACCACATGGATCGTCG
AAACCCTCGATTGGCCAGCAAAGAAACATGGAGAACTTGCCTGGAAGATT
ACATCGAATATAATTATCATTTCAAAGAGAAAATGGAGAGACATTACAGA
CAATCGGTTTTGGCAAATCTCGACCCAGCTCTCTTGAAGCCATCTGAATC
ACCACCACTTGATCTTTTCGACATTAACTCTGGCTTTTTCCAAACCATCT
TATATTATGTTCTTGGTACTGCTGCAACAATCCTCGTAATCGGTTTGATC
TACGAATTTTTCCGTTTGGTCTTCTTCGGTGAGAATGGAATTGATTTTAG
CCAGAAATTGGGATTGGCTCATAATGCAGGTTACACGGCAGACGGAGAGA
GTGCAGAGCAAGCGAAAACAGATTCACCCAACAAAAAGATGACACGTGAG
GAGAGACAAATGGCCGAGTTGGTGGAACAAAGCATCCAGCGAACAGAGGA
TAAAATGCAAGGCGTTGAACGAGATGTCAAGAATGAGATTCGGGAAATGG
TTCGATCTATTCGTCGTCAAATCCACGAAATGAAACGTAAACAAGATAAA
GACTATGGGTTGTGAGCCATAATATTCTCCTCAATTCATGAaaattatga
cgtaatgttttctacgaaaATACCCCGATTTTTGCCAGTAGTAGCATTAA
ACATTGCatcataaatatcatgaatGGGGTGTGTCTAAATTTaaatagcg
caccgcgctgaatctaaaaatagattttatttttgacataatNN
Run BLAST on NCBI

transcript from alignment at scaffold_86:365635..376396+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072871 ID=TCONS_00072871|Name=TCONS_00072871|organism=Clytia hemisphaerica|type=transcript|length=10762bp|location=Sequence derived from alignment at scaffold_86:365635..376396+ (Clytia hemisphaerica)
gcattttgaattatcaatctagaaactttcaaatacatctctgaaaaatc
tgcaactcttcaaaacaaaacttctggatcgaaaatgatcgaaaatgcTT
CTCTGTTTTgcttttgtgtgaatattttcgaatgttttattgttcgaatc
taacgttcgaattagattttcgaatagaaacattcgaaactacacagaag
aaagaagcaaggcggaagtaagttttaaaacaaaaacaaaaagaaattta
tatcaggacaatttttttgagtcgacaataaNNctcgatattttactcgt
tccgagattttaccgatatttttcctcgcctaaaggctctgaaaaatatt
acggaaaaatctcggaactcgtaaaatatttctcgtattgcactcgaagt
catgcgataactagtacttattgctatctagctttcatcatcaggtaggt
tcATTCAGTATGTTGCTTGttaaatctggtacggcgaacgAGTGAATTTA
AGCGActttttaccgacgaagaggaaaatttcgggattttttgtgaaaat
ctgcgCCGTGTTTGTGTAACCTTTTCAACATGTTACCAGAACAGTGAAAC
TTTTAAACTGTAAATCtattttttattgaataatAATATGTAGCACCGCC
CAGCGACCACCACACAAATTGTGTTGAATtgatttttaacttttcgaaaa
aACTGTACGAAAACTTAATAAACAAAACTTCTAAGCTCTTGAATGACTAA
TATGAAAAAGTGTAATCTGAATTCTGTATAATGCATTTAAGACTATGAAT
AGGCTCTTTATAATAAGTTAGTCTTGAATCCAAGCGCTGATGAATTGGCA
TATTCAAGCGACTATTGAATGAACTATTGATCTCTCAATTCAGAGTATTG
AATAAAATCTGGTACAGAATTTggcaaagattttcttttgagaAAATAAA
GCGTTACTTTGTTTTGCTTACATTTCTTGCTTGGTTACATCTTctcgttt
atttaattttttctgaattttagtgGTTTTTGTGCGATAATACGAAAATA
tctttttctgtttcaaaggTATGTATCCTTGCtgttttacttttatttta
gtccattctttctttttgagttttgtggTAAAGGAAACAAAACAGAAATA
AATTTTACTGTGGagactctttaactcgaacttctataactTGAATGTTT
CCATACCTCGAAGTCTTcataattcgaacaagttttgACTTGTGGAGACA
TTACTATAgttgcccagctggcacacaacgttgtttcaaaactcatctaa
cgttatatggacgttgtgaccgttagataaacgttgaaagaacgttgtgt
gccagctgggtgttTTACTTTCACATCACATTATCCACCCTTgtattttt
ttacagaaaacgGCTTTTTCAAGACCatgcttaaaatattttttgctgat
ttgtgTGTTTGAATCAAGAAAATTTGCGAATATTTTGTGActtgtaaaat
tttatttaaaaaaggaaGCATTCGTTTCTCAAGTAAAGATTGAATGGGTT
AAATCTTAAAATGTACTTTCTGGCCGAGGAAAATTCATCCCACGCTAAAA
ACACTCATAACATAATTACGTTATTTTCTATCTTTAGACCTTACAAACAA
GATGGGTTGGCCATCAAAGGCTGTTATAAAATGGTGGGCTTTTTTTCATA
TGGTTACTTTCATACTCATCAAAGACATCCAATCCATTTCTGAATGTCAA
TTCTATTATTGGGAAGTTAATCAAACATTACATAACGGTGGAACAAGCTT
TGGACAAAACCAATGTAACAGGAGATCCGGTGGCGCGGAAGATACGAATT
TTCCaagatttgaaatttcctgGATCCCAGCTCCCCCATACTTGATTGAT
GATGAAGGCAGTGACACACCGAAGGGATTTTTTTTCGGTATATATTTCTT
GTTCCCTTCTACTGATCATATACTTACGACCGAAATGCTGTTTTggtgtt
ttaaaaaaaatgtacaagTTTGAATTAAGATTGTGATAAAACTAAAACAT
TTATAGTCTCTTGTGGCGCTTTTTCGAAAGagatttttttcgaatgttCT
TCCTAACTTTTGATCACGTGAATCAagcttgtacacttttttttgaaaca
cacGGTATGACAAGAATGAAGCTTGAAGTGTCAATCAATGGTAATGTCAA
ATTTCTGATGAAGCCCGAATTTcggaaaaaatatctttttgggcaatttg
ttgttttttttgattaattttaggTATGATCCACGTTTTAAGTTTCAGCT
TTATTAACCCATTTTTTCATTCTGATATCAATATCACAAAATTTCTACTT
CGAAATAAACTCCATGCTTTTTTCACAAATGACGTAATTTTGCATAAAAA
CCTGGCAGAATTTTAATTGAAATCGTACATTACCAAGACAGACTTATACA
TGAACGATGCCACTTGAAAAAACatgctttttttctttttttgaaaatgg
ccTTGAAATCAGTCAAAATCCGTGTTATATCTTACATTGTTAGTGATTTC
TGACATAACGGAGCTTTGATCAAATTTCGCTCTCGTGTTCTTTGAATAAA
TCGTCTATTTATTTAGACGTTTTATaagaaaaagagcaaaatatattaac
agggttcccagcggtcagggaaaacctggaaaacctggaaaagtcaggga
atatttgtaaaatctctcaaaagtcagggaaaagtcagggaatttTTTTC
AGAATGCCTTGAATTTGATGGTTTTCAGGCAATCTTTGAATCTCCACCca
ccaaccatggtgggtcctccAAATGATCACATTAATTACTAAAATCAGCA
CACTTTGACTATTGCAAAGCTGACAgggttatttttgaaaagcgCGATAA
TTTCTTTACTACAACACGAAAAATTTGCCGTTTTTGGTCAGGGCAAAATG
GTCTTTTTTCATCTTGAGTCAGGGAAAAACTACCCTTTTCAACAGTTTTG
TCAGGGAAAAAGGGTGGATTTTAAAGCCAAAGTCAGGGAAAAACTACCCT
TTTCAACAGTTTTGTCAGGGAAAAAGGGTGGATTTTAAAGCCAAAGTCAG
GGAAAATCTGGGGAACTGCTGGGAAccctgtataagaacataaggcttcg
gtggccaaaatattaagaacaagttaagaacattttaaggcattgcagac
tctaaaacattcaatttattagaaaaatggacaaaaatactcacaaaatg
gtgaaaactcaagaacatgttaagaacatttttagacttaaaacttaaaa
agttaagaacttccatggccttcaaaaattctgaatgttctttataaaaa
ctGGTATTAATTAATTGAATTGctgatacacttttttttttataagaacc
agtaaatttttgttgaggctcggctgttcttatttttttggcacttcaaG
CCTCAAactgttcttatcctgttcttatttttagggctaatttgggggta
tttttgggtttgaacccaaatttcattaatttggcccttattttacctaa
aactcagcaactccaggctcaggattgttcttaaattgttcttatttttt
ggcatttttgagcctcattgttcttataaaaaaaaaagtgtagtaaaaaa
atcacttttcattCATACCAGATATGATTGAAGATTGGATTAAGACCTCG
TGTACCAACTCACATTTGTCATGGAAACCCACGTCTATCAGATGGAGAAA
ACGGCCTCAAGATAGTGTGAAGGATTTAGTGGAATGGTGTCGTGATAATG
TTTATGATTGCTCAATGAGTGTTCCCGCTGTTggtgtttcaaagaaaaat
ggtGGCAATGGTATCGTATATCATGAACCTTTTGCTGTGAGTGCAATTTT
AAAGTATCTTGTCTTTGAGTAGAGATATTTTGTGTTACGTACCAaaatga
acatataaacgactggacatccatctccttttgCATTTCTGCAGAAAGCA
CTGCTAGCATCATcgccgcctcgttaaaaacataaaatgaaacaatagat
ttttattGTGTAACTCTTGGGAAAATCACACAACAGTCCTACATACTTTT
ATatctgtttttttattttactatttttccggacaccctgtgtATGAATT
CTGTTccgatttttttttcggacaagCTATATGACACAGGTATCTCAACT
TTTCTTGCAGGCGCTTTACAAGGTACCAGATGTTGTTTACGTTACAGTCG
AAGGTGAAACATGGCGAAATGCAATCGATAGTTTCAGCCAATCAGTGATC
AATTTATGGCCATTTATCATGCTTTGTTTATTGTGTGCTTTCATCTCTGG
TGCTATTATTTGGTTTCTGGTAAGCCTTCTCTTTTTACCACACCCCTGTT
TCGTTCAGTGTAATAgcactatttttttttttaattactcAAGCGCTCTT
CTCGTTTAAccttttacatgttttttttataagcataacgtttataaaca
TACCAAGACCTGAATTTGTcgaaaaaataagcatattacaagcatattac
TGAGCTTGCTTTTGAGGTTTCTTCAAACggcattttaatttaaaaaaata
caagcGTAAACGCGGCAATCGTCTACAACTTTCCTGAAAAATCTTTGTGT
CATTACTTATTTCCCTATCCTCATGTATAGCAACGGCAGATTTTGGAAAA
GTTGGagaaaaataagcatatgataAACATACTTCGAGCCTGAGTCTATA
ATATCTCTAAGCATAACTGAGCTTGTTTCCCAAAGCAAaaaacatatgct
tataaaaagaaaaaacatgtatttcaacagtttaaaaaactttttttgtt
tgcaaaatatcacagaaaaaaatatgaaaaaacttCCAGAAAAAACATTG
TGTTATCCAACAGTTGGTGACAACATTTCTGTCATacaagttttttactt
tttactaaTGATGGCACTCTGATGAGGCCGAAACGTTTAAAGAAAATACA
GTAGACTTTCGGTTATTCGAACCTCCAGGGGGGGTGAGATTTtacttcga
ataactgaaaaattcgttttccCGCCAGATTCTCAACTTAACCTTAATTG
GGTGGACTTTCCTGAAGTAATTGAGGTATTGTGGTCCAATTGAGCGtaat
aaacacaaagaaattgcTTAAATAGCGATATGTAGCCCTGAATATTGAAA
CctgatttttaaaggaaaattattgTTCTCACTCGACGATCTCCCaataa
gaaaaattcgaataactgAGGGTGATTTAGCCTATAATGTACCCCAAGGG
GAATAGAAATCGCTTCGAATAATTGAAAGTTCAAATAACTGAAGTTCGAA
TAACTGAGAGTGTTTTTGCCTAGGTTGAGTAAGCAGATCCAAGAGGAACG
CCATCTCACTTCAAATAGCCGAATTATTCGAATAAGTGCATGTTCGAATA
ACCGGAAGTCTACTGTAATTCAAGTTTAACATAGAACAAGAATGAAGCTT
CCGTGtttgaattttatttgaaaaatatttctttcatttctaGGATACAT
GGACAAATGATCAAGATTTTCCTCGAGCATTTTTCAGCGGCACTTACCAC
GGATTTTGGTGGAGTTTTGTTTCCATGACAACCGTAGGGTTAGTATGGAT
CTAATCTCGTAACTGATCATCAATTCTGCGCAAACGTCGTTTTTCGGCCG
AAACAGTCAAATCCACGGTTCTTTTTTAATAAAGTTATTGNATCTCGTAA
CTGATCATCAATTCTGCGCAAACGTCGTTTTTCGGCCGAAACAGTCAAAT
CCACGGTTCTTTTTTAATAAAgttattgttttttgttttgttttaaccAA
TCACTActctcaaaagctcatttaatattcattctAAATCTGGATGAAAG
AGATCAAAGCGTTGCGCCAACCTGGACCAGGTTCTCGTACAGAGCCATGT
CTTTTAGAGTGAATACGTGTCATGCGcggagtatcagaatctgctcggag
ataAGTATGAATCgatctataattcgaacaatcGTCTTCTCTGTAAACGT
CCTGGTTTTGTTAGtggtggcaaatttaaactagactaaaagttattttc
aaaattttcaccaCTGGCAAAGAACTTGCTTCTGGCTTCATGACGTATAT
TTTTCTACAGAAAAACTACAGCTTTTGCCGGTTGTGGCAAAAAACTTGGG
TTTTTCCGGTTAAACATTTTATGAATATCATGAGTTGCCAATCTAAACTA
CTTTTATTCGAAAGTTCGTGCAATTGGAACGGCTACTGGTTACATTCAAC
ATGTGATAttcaccactgcaatgtcttctgacattacatcatggacccaa
cagctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttcaa
ccaatcagctgttcggtccgtggaagacattgcaatggtgcatatcatga
atacgctgtaagaaccagtaaattttacCTCGATTTTTGTTACCATAGTT
ACGGAGACAAGGCACCTGTATCAATCGTTGCTCGAAGTTTTTCTGTTATC
TGGATAATTATTGGCATTCTCATGATTTGTATTTTGACGTCACTGATGTC
CAATGGTCTTTCTGCTGCTATTTATGTTCCTGAAAAAGTTGTCGTCAAAG
CCAAGGTATTGTTTAGACCATTTTTATTACTAAATATGTAAGGTGCATat
atagactagtaaaccacggtgttgtatttcgctgcagcttACGCTTTGCA
ATAGGCTCACTATGTTTGCTGAATACATGTCTTTCCAAATCACTCTCCCG
CggtaatttctatttttataaaCACTATTTttcgcgttcctgtgtccaag
aaAAGACAGAcgcttttttcaaaatggctgacTTTTCTTAACTCAACCTT
GTGAAAAATTGTTGATCCTTATGAATAAGAGGCTTTCTCGCTGTAAAGAT
TATGTTTTGATAATCAAAATGAGAATGCTTTGTGGTAATTtcaggggggg
tcatgcagttggtACCCGACATCATGATGTCTAactgcaaaattgaaaat
ttgagcgtACACCCACCACCCCTTAGCAGTTAGTACCCAAAAATACTAAG
TGTATTTGACAATTGACAGGTTGACACCACCCCTATTTGCTTAGTACCCT
GAAGTACTAAACGCATCTGACTACCGGAAGGCTGACACCACCCCTATTTG
CACCTAGTATCCTGCAGTACTAATTGCATTTGACTATTGACAGGTTGGTA
CCACCCCCTATCCTGCCGGTTTAATGTTCTTGAGTAATTGCTGGCACTCA
GGGTAATCAATATTTGAAACCTGTCAGTACCTAACTAACCTTGGTGATTT
TTCTCTATTTGATTTATTATAATAAATACAAACCCCAACATATATGGTAC
AAATCTGCAAAGCCTAACATGTTAAGTAAAGTCTGCCCACCATATTAGGT
CTAAAGTCCCAGAAATAAAATATCACTTTTGCATTGTTTGACAAACGACT
AAAAAAAATGGCTGACAAGCACAGCTAACAAAACGTAAATCATAATGACG
TAATTTAGTAGCGGCacacaatttcaaaacaagaaaccTTATGGGATCTG
ATGGGATTTAGATTCAAGCTTTGGTAAGTCTTGAGAGAGAAATAATTAAA
GCTCCTACATTGAAAAAGGCTATTGATATGGATAAGACCAGTCTTTTTTG
CAGTTACTACCCTAGAATTACCATttgattgacttgaaatttatgAGACA
CTACCCCTCatagcagttagtaccctaaaagtaccatttgattgacttga
aatttatgAGACACCACCCTATACACAGCAGTTAGTACCCACAAGGTACT
AACtgcaaattccaaaaatgatatAAGACCCACCACGGTaccaactgcat
gaccccccccccctggtaaTTCGTTTGTTTCGGAAGAATTGTTTTTTACA
AAGAAAAGGGAAACATGAGATTATTTAGTGATTTTTTCTTGTTTAGGTCG
GAGTTTTACCAGGGATTGAAACTGGAGACATCATTGTCAATGAGTTGGAC
GGAGAAGTGAAAATGTTAAAAGATATAATCGAACTTGAAAACTGGTTAGC
AAGAGGTCTATTAACTGGTAAGAAAAAACAGTCCATCCAGAATCCTTTCC
AGTATTGGgaaaaaaatattcgaatcCTTTTTCTTCTTGGTGTTAAATTA
ATTTCTTGCTCACTTGTGAGACaattttatcgttttttaaAAGAAGACAG
GTATAATGCTTGGAGTTTTTGTTCATAAAATGCGATTGAACATTCATTTT
TCCAGGCACCGAAATTCACGGCAAAACTGCCAAAGTCAGCACACGCAATC
ATGTTTTCTTTATCTCTTTGAATAGGATTTGTTATGGACATGTACACCTT
CCAACACCATTATGAGGAACGCTTATCCAAACTCAATGTGAAATATGTTG
TAGAAAGAAGATTCCCAATGGAAGATTACCATTACGGTATTGCTTTTCAC
CACATGGATCGTCGAAACCCTCGATTGGCCAGCAAAGAAACATGGAGAAC
TTGCCTGGAAGATTACATCGAATATAATTATCATTTCAAAGAGAAAATGG
AGAGACATTACAGACAATCGGTTTTGGCAAATGTAAGCCTTTACTAAGCA
TAAAATATGCTTTTCCCCTATTATTTCAATCACTTCATTTATCATCCCGT
CATCACTTCGGTCTAAATCGCAGACCACTATAGATACTtgaatctctcta
attcgatttcaaGGGGGGTTTTTCATCGAATGAGGAACGGTATCGAATAG
AGGACCGTCTTTTATGAGAgcttcttgttgacggtgattGTATCAATATA
GTATTGAATAGTAATACGTCGACTAGATAATAGTTGAAGCTTATCACCAC
TTGAGTCTTATGATTAAGCCGGTGGTTTTGAATTCTaaaatcccacaatt
caatttTAGCTCGACCCAGCTCTCTTGAAGCCATCTGAATCACCACCACT
TGATCTTTTCGACATTAACTCTGGCTTTTTCCAAACCATCTTATATTATG
TTCTTGGTACTGCTGCAACAATCCTCGTAATCGGTTTGATCTACGAATTT
TTCCGTTTGGTCTTCTTCGGTGAGAATGGAATTGATTTTAGCCAGAAATT
GGGATTGGCTCATAATGCAGGTTACACGGCAGACGGAGAGAGTGCAGgta
caaacttttttctttttataagaactattaAATAGTCGTTCAGTCTCGTC
TGTtcttattttggaattttttaaaagcaGGAACGTTCAGTTTTCTTTAC
TCTGAGGTTGAGTTTTTAAATAATGGAGTGAGAAATTTcgcttttcttta
aagtttcgGAATAATATCGGGCAACGTTCAAGGATTGAGCCATGTCATGT
CACAATCATGCCGCTTTCAATTTTTGCCTTCATAATTTgttgtaaaatct
tttttttggtaaatttgtTAGTTGATTTTTTCCTACTCTTCTCCCCTATC
AAAAATCGGTTAAATTGGATAAATGATGGTATTCATAAAAATCATGGTTT
CTTAGTGCGCCTGGCATTTTTAAACGTTTATTTCCAGTGAAAATATTCCG
CCATTGAAAAGGTTGTCAAATTAAGGATGGTTTCATTTCCGAATGCGATT
CGAAATGCAGCTCGAAAGGGATTTTGTTatagaaaaataataacaccgtc
acactggtttgtagaggttaaaataccggcataatgacaaaaaataaggc
tatATACATTCACTGTCTGATTTTAATATACCGTTtccccgtctcttttt
tcgtcaaatttaCGGTATTACGGAATTtaggccaatcccgtcacaccatA
AAAGTACAACTCCCCCGCCactttagactggagtcgtttataatgcgtgt
aatactaataataccaatactaataataataacaataataatacgggatt
tagtttgtataaacgactggaagaatccggtgttcgaGCCTTATAGAttc
aggggctagctacgcagaaacttgcgtagcgagaaaacaatttatcaagc
aacaacaaactctcaaaacgaaatcaactcaaatgaaaaactttcaatac
acaaatccacactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNagaattattttgagcaggaaaaaattataattgcaatattgacact
tttcttttgtttggagttagtgcacaaaggtttctagacgactaaaattg
ttccgccctttattactttttgctttatttctactatgtatgaattagtc
gtctagcttgctagactaccgCCACTTCGAAGGGTTTAAATACTCATTCT
TTTCTCTTTCTATTCGATTCACAGAGCAAGCGAAAACAGATTCACCCAAC
AAAAAGATGACACGTGAGGAGAGACAAATGGCCGAGTTGGTGGAACAAAG
CATCCAGCGAACAGAGGATAAAATGCAAGGCGTTGAACGAGATGTCAAGA
ATGAGATTCGGGAAATGGTTCGATCTATTCGTCGTCAAATCCACGAAATG
AAACGTAAACAAGATAAAGACTATGGGTTGTGAGCCATAATATTCTCCTC
AATTCATGAaaattatgacgtaatgttttctacgaaaATACCCCGATTTT
TGCCAGTAGTAGCATTAAACATTGCatcataaatatcatgaatGGGGTGT
GTCTAAATTTaaatagcgcaccgcgctgaatctaaaaatagattttattt
ttgacataatNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045222XLOC_045222Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072871-exon-scaffold_86-1491911889:365635..366702TCONS_00072871-exon-scaffold_86-1491911889:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:365635..366702TCONS_00072871-exon-scaffold_86-1510915933:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:365635..366702TCONS_00072871-exon-scaffold_86-1575043694:365635..366702Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:367272..367317TCONS_00072871-exon-scaffold_86-1491911889:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:367272..367317TCONS_00072871-exon-scaffold_86-1510915933:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:367272..367317TCONS_00072871-exon-scaffold_86-1575043694:367272..367317Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:369306..369520TCONS_00072871-exon-scaffold_86-1491911889:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:369306..369520TCONS_00072871-exon-scaffold_86-1510915933:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:369306..369520TCONS_00072871-exon-scaffold_86-1575043694:369306..369520Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:369845..370003TCONS_00072871-exon-scaffold_86-1491911889:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:369845..370003TCONS_00072871-exon-scaffold_86-1510915933:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:369845..370003TCONS_00072871-exon-scaffold_86-1575043694:369845..370003Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:371178..371272TCONS_00072871-exon-scaffold_86-1491911889:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:371178..371272TCONS_00072871-exon-scaffold_86-1510915933:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:371178..371272TCONS_00072871-exon-scaffold_86-1575043694:371178..371272Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:372133..372289TCONS_00072871-exon-scaffold_86-1491911889:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:372133..372289TCONS_00072871-exon-scaffold_86-1510915933:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:372133..372289TCONS_00072871-exon-scaffold_86-1575043694:372133..372289Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:373631..373751TCONS_00072871-exon-scaffold_86-1491911889:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:373631..373751TCONS_00072871-exon-scaffold_86-1510915933:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:373631..373751TCONS_00072871-exon-scaffold_86-1575043694:373631..373751Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:374010..374266TCONS_00072871-exon-scaffold_86-1491911889:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:374010..374266TCONS_00072871-exon-scaffold_86-1510915933:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:374010..374266TCONS_00072871-exon-scaffold_86-1575043694:374010..374266Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:374594..374831TCONS_00072871-exon-scaffold_86-1491911889:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:374594..374831TCONS_00072871-exon-scaffold_86-1510915933:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:374594..374831TCONS_00072871-exon-scaffold_86-1575043694:374594..374831Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1491911889:376009..376396TCONS_00072871-exon-scaffold_86-1491911889:376009..376396Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1510915933:376009..376396TCONS_00072871-exon-scaffold_86-1510915933:376009..376396Clytia hemisphaericaexon
TCONS_00072871-exon-scaffold_86-1575043694:376009..376396TCONS_00072871-exon-scaffold_86-1575043694:376009..376396Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:365635..376396 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08825	0.91371	1.22452	1.20269	1.70011	1.44825	1.48603	2.33586	1.04321	1.09141	0.953205	1.06907	2.0534	2.02654	1.91798	1.50695	0.996884	1.6154	1.51213	1.53007	2.55271	2.5679	1.62277	1.72221	2.1471	3.71919	3.45827	2.95084	1.35555	1.27655
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072871 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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