TCONS_00072862 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072862
Unique NameTCONS_00072862
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2257

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072862 ID=TCONS_00072862|Name=TCONS_00072862|organism=Clytia hemisphaerica|type=transcript|length=2257bp
TGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCCA
AAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTAT
GGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCAG
GGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAACTCAAAGGG
CAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAGGTTGGAGA
gtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGTCAGCTGTA
AAGTATGTGAAAAAGCTGGTGAATTATCTATAactcaaaaattgagtaaa
aagaaaactttgttGTGGTTTTCTCCAGCCCTTGGTCTTGATGTTTCCTC
TGGAATGGAATTAATTTGTCTCTATGGAATGGCTTTATCTATTGCTGCTA
TGATATCAAgtggttttcaaaacaaatttgtcttCATTACCCTATGGCTA
TTATATTTTTCAGTTTATCAGGGATATCTTGCTTTTGGAAACTGGATTCT
TGACAATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGGTATGAATGGA
GGACACACAGCCATGGCTTTTTGGTTGGTGAAATGGCTCTTATTTCGCTT
GATGTTTCAGTCAGGAGTTGTCAAATTACAATCAGACTGCCCTACTTGGT
GGGGTTTAACTGCCCTCAATTGGCATTATGAGTCACAATGTATCCCAGCA
CCATTAGCCTGGTATGCCCATCAACTCCCAGAATGGTTTCAAAAATTGAG
TGTAGTTGCTACATATGTCATTGAAATTGCTCTGCCATTCCTTTTCTTTC
TCCCAATAAGAAGTTTGAGGATATGGGGTTTCTTCTCACAGATATTACTC
CAAGTGTTAATCATCATGACAGGCAATTACACTTTCTTCAATCTTCTTAC
CATGACCTTATGTTTGTCATTAATTGATGATAGATTTCTCTTCGAATATA
CACCTTCATTTGTTGGGAAATATTTCCAGTTACCAAAAGTAACGTACGAA
AAGAGAAGTATTTTCAGAAGATTGTCAGTGTTTTTACTAAAGACTGCTGT
CACTACAACACTTATTTACTGGATTGTGAAGTACTTCAATATTAGATTTG
CTGCAGACTCATCACAAATTCTTTCTGATATAGCTTTCAGCAAGGAGGAG
TTCAAAAGTGCTGTTACGAAATTGACAAGATTTTCAATCTATATGGGTAT
CTTATCACATCTGGTGCATTTGGTCAGATATCTAGGAGATGCAGCAGCTG
ATGATAGAAAATTGAAGACATTAATCAGAACATTTTTTGCTGCTATCTTT
GCAACAGTTGCTGGTTGGATTTTCTGTATAAGTCTAgtaCCCTTCACTCA
GATTGATAGAAGTGTTCAAAATGACATTTGGCCAGTTGTAAAGGAGTGGA
ACAATGTTGTTGATTCTTATGAACTTGTTCATAGCTACGGTCTTTTTAGA
AGTATGACTGGTGTAGGAGGACGACCAGAAATAATTATTGAAGGAACAAA
TGACTTTCGAAATGGCCCATGGAAGgaaTACAATTTCAAATATAAACCAG
GCAATTTGAAAACACCTCTCCCAGTAGTTGCACCTCATCAACCGCGGTTA
GACTGGCAGATGTGGTTTGCGGCACTTGGATCATACCAGCATAATCCTTG
GTTTATTCATCTCATTTACAAACTACTTGAAGGTGAAAAAGATGTTTTAG
ACTTGGTTGGAGAAAACCCTTTCCCAGATAAACCTCCTATTTATATCAGA
AGCCGTCTGTATACATACCATTACACAacattatcaaaacaaactacTGG
TATCATTGATGGTGTCCTAAGATCAAGGAGGATAGGGTCATGGTGGAACA
GAGATTCACCCAAAGAGTACACTCCACCTCTCTCTGTCAATGACGAGTCA
CTCATCAACTACATCAAAAGTTTGGGCTGGCACAAACAGaaactGAAGAA
GGAAAAACCGAATGGGAAACTCTATCTTTTCTTAAAGGCTGTTAGAAAGC
TGCTGAAGAACTTGGACCCaacttttttcatgtttcaaaTAATCCTATTC
TCtctcattttcaaatatttttaccatttataaatactttattcagattt
tatagaaaaactattttagattttggaatttaaacaatattttgtagatt
ttttaggATTTTCAGGGAAAAACTACTTATTAGGCTTGCAACTTTTTAAT
AATAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:319727..331231+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072862 ID=TCONS_00072862|Name=TCONS_00072862|organism=Clytia hemisphaerica|type=transcript|length=11505bp|location=Sequence derived from alignment at scaffold_86:319727..331231+ (Clytia hemisphaerica)
TGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCCA AAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTAT GGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCAG GTAAGCAAAGGTTCTTctccttttttcaaaattttgtccatACGTTTTTA AGATAACTTAATTGGATCAGCTCTTGTCATCTCTCGTTAGAACATTTTGa caatttgaaaaatcatttattcaagatttttttcaaaccaTTTTATCAAA CcattataaaaatttgaaatttttgttgttgctgGTATGACATGAATAAA AGTGTTGATAAAAAGTAGTCAGAAAATGTGATGTAATTTCTCCTGCCTCA ACTTTAGGGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAACT CAAAGGGCAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAGG TTGGAGAgtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGTC AGCTGTAAAGTATGTGAAAAAGGTGAAAGCTCTTGcgtacctatcgattc tatttTGACTCAATTTTCCCAAGGTTGAAAGAAGATTTAGTTAATATATA ATGACTCCAAATGATTTCAACCATCAAACCATGATTTTATGTTTGGTACA ATGATAGTTTTACTAAACCAATCCATCATTCTTTTTAGCTGGTGAATTAT CTATAactcaaaaattgagtaaaaagaaaactttgttGTGGTTTTCTCCA GCCCTTGGTCTTGATGTTTCCTCTGGAATGGAATTAATTTGTCTCTATGG AATGGCTTTATCTATTGCTGCTATGATATCAAgtggttttcaaaacaaat ttgtcttCATTACCCTATGGCTATTATATTTTTCAGTTTATCAGGTAAAT GTTTGAAAACTTGGTTTCTTTTAATATAATAATGCCAGATAAATCAGGCA AGCAAATACCACTGCACAGTGATGTTTTTTGTAGAAAATCAAGCAGGGTT AAGAATGAAAGTGTCATGGAACGATGGTCTGATTTGAcataatttttcca ttttttgttaTTTATCAAAGGTTGGCCAAACATTCCTTTGGTTCCAGTGG TAAGTTTGGTTTTAAAGTTTCCTATCTATTCACTTGTTGCCAGCACACAT CTAAAAGTGTGGCCAGTCATATGCTCGTAAAGAAAGacaactttttggaa aatttttgaaattcagtcTTGAATGCATTACTTAATTATCCCATGAGAAA CTCTTaatattcttttatataatCCTTTCAGGGATATCTTGCTTTTGGAA ACTGGATTCTTGACAATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGG TATGAATGGGTAATTAATAATAGAATTTTATGaaacaaaatcatttgaat ATTTAATCATTAGATTCAGCACATCTTTTGTGCACCTTTTTTACCTCCCT TTCCCAATATGATCTTTCTCCCAAAGTAAAAAGGCATCCCTTCACCATTA TAATCAGTTGTTGCNTTCTATTTGtgctacaaacctcaaattaggcttaa aatgttccttgggaaaAAGTAGGAATCGAATGTAGCAATTACATACCTCT ACCAcatatataaaattcaaaagtcaGCTATTTAGGCCAAAATGGACCGA CACCAGGAAGACACTTGTTTTTGCctggaaataaaacctaaaatctgcGC TGTTGGtgctacaaacctcaaattaggcttaaaatgttccttggaaaaaa gcagGATAAGAATGTAGCAATTATGTACCTCTTACCatgtatataaaatt aaaaaaattaggtttGTAGGCCAAAATGGACGGAAACCGGTAAAACCCAG TGTCTTCCCGGTTTCCGTCCATTTTGACctgaaaacctaatttttttaat tttatatacatGGTTAGAAGTACATAATTGCTACATTCTTATCttgcttt tttccaaggaacattttaagcctaatttgaggtttgtagcaCGAACAGCg cagattttaggttttatttccagGCAAAAACAAGTGTCTTCCTGGTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG ATTCCTACTTtttcccaaggaacattttaagcctaatttgaggtttgtag cacaaatagaacagattttaggttttatttccagGCAAAGCCTAGTTTCT TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTAAGCATAATTTGAGG TTCATAGCAccaacagaacagattttagatttttttcccaggcaaaccct tttttccccagtttcggtcaattttggccGAATATCcaaatcttttgaag tttacatATATGGTAgaagtatataattgttacattctaatcctactttt ttccaacgaaTATTTTGACCCTAATTTGAGGCTTGTAGCACAAACAAAAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNcaaacagaacagattttagatttttttccaggcaaaac cctgttttttcgcaattttggtcaattttggccgaaaaacctaatttttt aagtttatatatatggtagaggtatataattgttacattctaatNNNNNN NNNNCAAGGATCATTTTGAGCCTAATTTGATGgttgtagcaccaacacag caggttttagattttttttccaagcaaaatggcccgaaaatggcccattt tgggTATAAAAAAGGGCGGAGAACCGCCAANCTTGAATAAGGTGATAAGT TCTGGAATCATCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGAT CCTGGtggcaaaataaaaataatttttttaaaaattaagtaGGCATAAAT GGAATTAAAATATCTACACTATTCTAAAACAATATGATTGTGATAGTTGT CAATTTTACAATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTAT TAAACCTATTTTTCCTCACTTATCAACCTCCCTATAAGGANTCTTAGATT TATGTTATTTGGGTCccaaccaaccaaaaaaaattatgcaaacttaattt tgaaaaaaaaggtctctATAGCCCACTGCTAGTGGTAAGTTTGGTTTTAA AGTTTCCTATCTATTCACTTGTTGCCAGCACACATCCAAAAGTGTGGCCA GTCATATGCTCGTAAAGAAAGacaactttttggaaaatttttgaaattcg gTCTTGAATGCATTACTTAATTATCCCATGAGAAACTCTTaatattcttt tatataatCCTTTCAGGGATATCTTGCTTTTGGAAACTGGATTCTTGACA ATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGGTATGAATGGGTAATT AATAATAGAATTTTATGaaacaaaatcatttgaatATTTAATCATTAGAT TCAGCACATCTTTTGTGCACCTTTTTTACCTCCCTTTCCCAATATGATCT TTCTCCCAAAGTAAAAAGGCATCCCTTCACCATTATAATCAGTTGTTGCT TCAAAGTAAAAGACGCTGCACCTTGAATAAGGTGATAAGTTCTGGAATCA TCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGATCCTGGtggca aaataaaaataatttttttaaaaattaagtaGGCATAAATGGAATTAAAA TATCTACACTATTCTAAAACAATATGATTGTGATAGTTGTCAATTTTACA ATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTATTAAACCTATT TTTCCTCACTTATCAACCTCCCTATAAGGATTATCTAGATTTGGTTCTAG CAATTCTGTCTAACTGAGCTAAATCGTAAGTCTTCTTCTTACTTATACAA TAACCCTCCTTTTCTTGGGCTAAAACACGcaataaaaacttctttttaGA GGACACACAGCCATGGCTTTTTGGTTGGTGAAATGGCTCTTATTTCGCTT GATGTTTCAGTCAGGAGTTGTCAAATTACAATCAGACTGCCCTACTTGGT GGGGTTTAACTGCCCTCAATTGGCATTATGAGTCACAAGTATGAATAAAA ATAACCCAACTCTTTATGCCAGGGTCTACTCTACAGCTTTGCAGGTTTCA ACATCAAGTGCCCTTTTGTTCAGCGAAAAATTCTGCATTCTATAATAATG GGAATAACTCTCAAAAATGTTAGGCAGAATTTTACATTTAGTTCTATGAT TTTTCAAGTCTTGATTTGCTAAGTTTAACACTCACTatccttttctttct ttttgcctTACGTCNTTGCTAAGTTTAAAGGATAACTCTCACTATCCTTT ACTTTCTGTTAGCCTTACATGATCATTTTCTTTAACTGTTTATAGTGTAT CCCAGCACCATTAGCCTGGTATGCCCATCAACTCCCAGAATGGTTTCAAA AATTGAGTGTAGTTGCTACGTAAGTTTTGTAAATATTTGTAAACACAACC CCAAAAGTTAATCCTAGCAAAGTTGATATATTTTTGTATTCCAATGAGTC ATTAGACACAACAAACACAAAAGATTTGGGCCTTCTTTTGAATGTCTTTT TAAAtcatacacccccttctcacagacccagtaggattttttcagccaca GACTGAAACTCAATGAGGATTGATATactcatttttttatgaatgaaaTT GGACcagcaattttattttattttaaacaatataTTTCGAATACTTGTGA TTCATCTTCAGgttctaaaatataaaatagtaaaacagttaaaaccattt agtaaaaatataaatttcccATAACACGCATACATACAACCTACTCTGAT CAAAGAACTAATGtaactaaaaaatcaaaatcaaaattcactAAATCAAA AGTGAATTCcacttttttatggctggggatttcaattcttttgtttccaa attaaaaaattcagtggggatgggataAATAGCAAGAAATTTTCTATTGA AGATTGgttcatttgattattttcagtgggggacaaaaattggaggataa ttttccaccagggatgatattttggccaatttttttaGTGGGaccccagt gggtctgtgagaaagagGTGTAATCATGCTTTcacaaattcaaaaatctt ttttcgtggGAAACTTGTGAAATCTTGATAAGCTGGGCCATATCTGGACC TCTGAATACCCCTGAATATGGAAAATATTGACTATATataatcaggctat ttagagcataATTAAAGGGAATCTTTAAagcagctgaaaatattttccaa caGGAGAGTTCTGGTAAGATCCCAATGTTATTTAGTTTGACATTTGCAGa tggcattttcattttcttgtcTTGTCTTATTTCAGATATGTCATTGAAAT TGCTCTGCCATTCCTTTTCTTTCTCCCAATAAGAAGTTTGAGGATATGGG GTTTCTTCTCACAGGTAAGATATTGGgtatatatttttacaaaatgtcGT TATGTTGTTCCAAGAAATCTATAAAGGTACTTGCATCGTTTCTATGATGT CCACAGCCATTAAAGTAGCAATTTCTGAGTTCAATGGAAATTGGAAAGAT GTGTTTAGGGCACTGTTAATTAcaattttgaactttaaacaaaataataa taattctaTTCTCCTATCTCAATGGAATAGGAGAAAattatttgatttat ttattatcttttttGGCAGATATTACTCCAAGTGTTAATCATCATGACAG GCAATTACACTTTCTTCAATCTTCTTACCATGACCTTATGTTTGTCATTA ATTGATGATAGATTTCTCTTCGAATATACACCTTCATTTGTTGGGAAATG TAAGTTTCAGCAGTTTTTTTCTGCACAACACGTAAATTATTATAAAGCTT TTTTCTTTCCTTATGTTAATGGATAATgccttttcttttatttgatttta atgaTTGTCTTTTGGCTATGCAAATGAACAACCTCTCAATTTATCTCTTC TAAAGATAGTCAAAGCTAGCCAAAACTAACTACCTAAAATCTACTTTTAC ACACATTGAACTTAATTTCGTGATGCAAAATCTTTTCTAGATTTCCAGTT ACCAAAAGTAACGTACGAAAAGAGAAGTATTTTCAGAAGATTGTCAGTGT TTTTACTAAAGACTGCTGTCACTACAACACTTATTTACTGGATTGTGAAG TACTTCAATATTAGATTTGCTGCAGACTCATCACAAATTCTTTCTGATAT AGGTAATTATTTAGTATTTATTTTATTacttgaattttgttttttttact caAGAAAAAGCACATAAAGAAAACCAGAGAAAACTAAAAAGACCTTGATG AATATCAAGTGACAACTATCAGTTTTGTCTGATTTCTTTTATCTGAGAAT TTTAGACATTTATGATGCAAAAATGTTACACTTCTTCTATAGAGTGCCAT CCTGGCTAAAAGTGCCGCATGCTAAACCCTGCAACGTAATAATTGGAATA TTGAAAGCTTACACACCAGAATCAGAAAGTCTTTTGTACTAAGTACCAAA cttcaaatttccaaattcaGTTATTAAGTTGAAGTGTGTTAAAATATAGT TTTGATTCAAGGTGACAGACAAGGCATCATGGgcccggcgagccattttg agtgagagggccaacatttttttcatgctcaaaacaccttaaaacgatat ccatttggggagaataatagtttttgtggtttgatttggtctcaaaccag cttgAAATAGTAACTCTTTAAAACGTATGATatggtctaccaaaaagtgg ggggggggcatggaTCCCCCAGCCCCCCCTGTTGATGGGGCCCATGGaca tcaaaaatttgaatgaattttcacattttgatttttccgtCTTCCAGCTT TCAGCAAGGAGGAGTTCAAAAGTGCTGTTACGAAATTGACAAGATTTTCA ATCTATATGGGTATCTTATCACATCTGGTGCATTTGGTCAGATATCTAGG AGAGTAAGTtcaatcaaagaaaaattcTGATTTCTTGATTCTAATGTTTC AGAGGATATTATTTAACCTGAAGCTCTTGAAAATAACCTTAATTGCATCC CTCCATCAGCCAGCTTGGATTCTAGTCTTTCTCACTCACAATTTTTGCAA ACAAGTAACCATATAAAGCAAGAATTAAGTTCTCATTTTTATCAGAAGTT TGGTTTCTTCTAAAATACTTTCATGAAACTCAACTATAAAGTTAATTTTC CATTTGCAATCATGTTTACAGTCAAtggtgttttttattttcattgtgaT TTTCATCTTTTCAGTGCAGCAGCTGATGATAGAAAATTGAAGACATTAAT CAGAACATTTTTTGCTGCTATCTTTGCAACAGTTGCTGGTTGGATTTTCT GTATAAGTCTAGTAAGTGTACAATTCCTGGGATGTGTTAAACAGTTAGTT ATACTTTTAGAATTTGGGATTTATCttctaatctacctgcaccaagttCA GATTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTAATCAATTAAGAAAGTTATTAAGATCT TTTTCTTAGTTTTAGTAGACTGAAATTCTTTATCGAGTCATTGCTCATCA ACTAATTTTCTAACaacttttcttcaattttcaggtaCCCTTCACTCAGA TTGATAGAAGTGTTCAAAATGACATTTGGCCAGTTGTAAAGGAGTGGAAC AATGTTGTTGATTCTTATGAACTTGTTCATAGCTACGGTCTTTTTAGAAG GTATGAATTACAAAATAATTCTTCAACAGTTTTTTAAGTAAAACCATATA GTAACCAGTGTTGCAAATAAGGAATTTCAAGTTGGCCGGTGATTACTCAA TCAGAAAGCTCACTAATAATGAAACTATCAAAATTTCATGGGAAAAAAAC ACACATATTAGCTTAAAAATGacaccggccgttatttgcagcactggtAA CTACTCCATTCGTTTACTATAGCCACTTGTACCAAAGTAGTATATTATTA ATTCAATTTAGTATGAAAAGGATGACTAATAAAAAATTGGATTTGTTTTC ATCCTTTCAGTATGACTGGTGTAGGAGGACGACCAGAAATAATTATTGAA GGAACAAATGACTTTCGAAATGGCCCATGGAAGGTTAGAAGCTTGTTGAT TTAcagaagttttttttcttcaaaatgatgATAAGAAACACTATCTCTTT ATATTAACTCAGGTATTTGAAGTTCCAAGTACTTGTGAATTGCTCTAGTA AGAggttctgatatgaaatattggaagaaaaattaagaatcaaaatcttt ttaattttaggaaTACAATTTCAAATATAAACCAGGCAATTTGAAAACAC CTCTCCCAGTAGTTGGTAAGTTATGTGTTGTACTGCTACTGAACCCAAAT ACTAACTTCAGTGTAAACTGCTGCTTTACACTGGGAATTTATAAAATCGC CATATTGACTCATAGACAAAAGAAACGAGATGGGATGAGATGGCACATCT CCTtgcaataaattttcaaaagtgctAAAAGATAAATACTGACCAGACAT CCCCTTCAATGAACTTGATATCCCTTGAAAAACATAcatgaaaattttgt aaatgcaaggctcgaaataacgatttcgAGTGGGTCGGACAAAAGGTCCA ATCaaggttgctttagcttgaaaattatatgaTTATTCGGTCAgacatga agctatttgggttGGACAATGTCAGATGTCAGATAGTAATTTTAAACCTT GTAAATGTTATCTTTTCTCATAGCACCTCATCAACCGCGGTTAGACTGGC AGATGTGGTTTGCGGCACTTGGATCATACCAGCATAATCCTTGGTTTATT CATCTCATTTACAAACTACTTGAAGGTGAAAAAGATGTTTTAGACTTGGT TGGAGAAAACCCTTTCCCAGATAAACCTCCTATTTATATCAGAAGCCGTC TGTATACATACCATTACACAacattatcaaaacaaactacTGGTATCATT GATGGTGTCCTAAGATCAAGGTAAGGACATTGTACTCAACAAAATGCCTT CTAACTCTTTGTTCATTAACTTGGGTTTGAGAAAATTACTATTTTTTAGT AATAACTCACTCATCTAGATAACAAACAGTAGCTCTTTTAGCAGTATATT TCACAGCGGCCAAATTTAACAATCGTCGATATCATTTGAAGTAGCATTAT ATTTTGTATTCCCTGATTGAATTTACCTTCGCAAATGTTCACCATTATTA TTTTGCTTTGATATTATTTTCCACCAAGGCGAAccctaaaaaatttttca tttccgGTCCACCAAAGCTTTTTGTAATTAATAGCATTTCTTTCAGTGAA AAAGAGAACAAATATAAAGACAGAATGTGGGGTAACACTAAAAGCCAGAG agctgatttttttcttccaaacttttttattagaaatcatGAAAAGGTGG ACCGGAAACGAAAAAAATTTTAGGGTCGGCCCAGACTCTCGGATTAAAAG CCTTGAAagaatctttgatttttttatttgttgataGGAGGATAGGGTCA TGGTGGAACAGAGATTCACCCAAAGAGTACACTCCACCTCTCTCTGTCAA TGACGAGTCACTCATCAACTACATCAAAAGTTTGGGCTGGCACAAACAGG TATGCCTACAATAACCTTTAAGAGttcctttgaaaaaagttttttcagca CTGATTGGAGcaggtttttttgaaaaaaaagtgtgaaaattgttgaaaat caGAGTCAGTTTATATACAAAAgctatatttgaaaaacataaaatttatt GGATACAACTTTTGATACCCGTACTACTGTCTAACCCTGTCAAATTTATG CTTAGTTTCCAGAGAGGTTTCAATCCTTTTAAAAGCTGAAACCCCTCTTT TCAATTGGAAAAAGTTTTATTCCCTCTATATCCcttcttgaaaaatttag atCCTTCCTTAAAAAAGGAGGCGggacagcaaaaaaaattactgaGGCAG TGGGTCTTTCAAATGCTGTTAATACAGTCAGGGACCCTTATTCTGTTTAC ACAACATCTTGtttctttcttgattttttataaaaaaattagaaacgTGC AATTATTATTCGGACTTTATTGCTTATTATACTTCTCTGTTAGTGTTTAA AAGAGTATTGTCtagtcaattttattttttctttcagaaactGAAGAAGG AAAAACCGAATGGGAAACTCTATCTTTTCTTAAAGGCTGTTAGAAAGCTG CTGAAGAACTTGGACCCaacttttttcatgtttcaaaTAATCCTATTCTC tctcattttcaaatatttttaccatttataaatactttattcagatttta tagaaaaactattttagattttggaatttaaacaatattttgtagatttt ttaggATTTTCAGGGAAAAACTACTTATTAGGCTTGCAACTTTTTAATAA TAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045219XLOC_045219Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072862-exon-scaffold_86-1491911889:319727..319876TCONS_00072862-exon-scaffold_86-1491911889:319727..319876Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:319727..319876TCONS_00072862-exon-scaffold_86-1510915933:319727..319876Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:319727..319876TCONS_00072862-exon-scaffold_86-1575043694:319727..319876Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:320134..320298TCONS_00072862-exon-scaffold_86-1491911889:320134..320298Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:320134..320298TCONS_00072862-exon-scaffold_86-1510915933:320134..320298Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:320134..320298TCONS_00072862-exon-scaffold_86-1575043694:320134..320298Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:320465..320670TCONS_00072862-exon-scaffold_86-1491911889:320465..320670Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:320465..320670TCONS_00072862-exon-scaffold_86-1510915933:320465..320670Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:320465..320670TCONS_00072862-exon-scaffold_86-1575043694:320465..320670Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:321058..321135TCONS_00072862-exon-scaffold_86-1491911889:321058..321135Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:321058..321135TCONS_00072862-exon-scaffold_86-1510915933:321058..321135Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:321058..321135TCONS_00072862-exon-scaffold_86-1575043694:321058..321135Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:324226..324364TCONS_00072862-exon-scaffold_86-1491911889:324226..324364Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:324226..324364TCONS_00072862-exon-scaffold_86-1510915933:324226..324364Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:324226..324364TCONS_00072862-exon-scaffold_86-1575043694:324226..324364Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:324672..324745TCONS_00072862-exon-scaffold_86-1491911889:324672..324745Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:324672..324745TCONS_00072862-exon-scaffold_86-1510915933:324672..324745Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:324672..324745TCONS_00072862-exon-scaffold_86-1575043694:324672..324745Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:325662..325740TCONS_00072862-exon-scaffold_86-1491911889:325662..325740Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:325662..325740TCONS_00072862-exon-scaffold_86-1510915933:325662..325740Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:325662..325740TCONS_00072862-exon-scaffold_86-1575043694:325662..325740Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:325996..326125TCONS_00072862-exon-scaffold_86-1491911889:325996..326125Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:325996..326125TCONS_00072862-exon-scaffold_86-1510915933:325996..326125Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:325996..326125TCONS_00072862-exon-scaffold_86-1575043694:325996..326125Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:326367..326528TCONS_00072862-exon-scaffold_86-1491911889:326367..326528Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:326367..326528TCONS_00072862-exon-scaffold_86-1510915933:326367..326528Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:326367..326528TCONS_00072862-exon-scaffold_86-1575043694:326367..326528Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:327174..327279TCONS_00072862-exon-scaffold_86-1491911889:327174..327279Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:327174..327279TCONS_00072862-exon-scaffold_86-1510915933:327174..327279Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:327174..327279TCONS_00072862-exon-scaffold_86-1575043694:327174..327279Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:327591..327687TCONS_00072862-exon-scaffold_86-1491911889:327591..327687Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:327591..327687TCONS_00072862-exon-scaffold_86-1510915933:327591..327687Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:327591..327687TCONS_00072862-exon-scaffold_86-1575043694:327591..327687Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:328411..328526TCONS_00072862-exon-scaffold_86-1491911889:328411..328526Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:328411..328526TCONS_00072862-exon-scaffold_86-1510915933:328411..328526Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:328411..328526TCONS_00072862-exon-scaffold_86-1575043694:328411..328526Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:328837..328909TCONS_00072862-exon-scaffold_86-1491911889:328837..328909Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:328837..328909TCONS_00072862-exon-scaffold_86-1510915933:328837..328909Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:328837..328909TCONS_00072862-exon-scaffold_86-1575043694:328837..328909Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:329087..329141TCONS_00072862-exon-scaffold_86-1491911889:329087..329141Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:329087..329141TCONS_00072862-exon-scaffold_86-1510915933:329087..329141Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:329087..329141TCONS_00072862-exon-scaffold_86-1575043694:329087..329141Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:329550..329796TCONS_00072862-exon-scaffold_86-1491911889:329550..329796Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:329550..329796TCONS_00072862-exon-scaffold_86-1510915933:329550..329796Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:329550..329796TCONS_00072862-exon-scaffold_86-1575043694:329550..329796Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:330314..330425TCONS_00072862-exon-scaffold_86-1491911889:330314..330425Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:330314..330425TCONS_00072862-exon-scaffold_86-1510915933:330314..330425Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:330314..330425TCONS_00072862-exon-scaffold_86-1575043694:330314..330425Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1491911889:330964..331231TCONS_00072862-exon-scaffold_86-1491911889:330964..331231Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1510915933:330964..331231TCONS_00072862-exon-scaffold_86-1510915933:330964..331231Clytia hemisphaericaexon
TCONS_00072862-exon-scaffold_86-1575043694:330964..331231TCONS_00072862-exon-scaffold_86-1575043694:330964..331231Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:319727..331231 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.149284 0.339945 0 0 1.15621 6.13227e-07 0.212708 0.000554829 0.38863 0.0118177 0.71067 1.73339e-07 1.05036 0 1.36215e-08 0 0 0 2.64771e-10 0.323401 0 0 0 0 1.7722 0.550883 0.48549 1.42906e-09 2.41416e-08 0.784875
Blast
BLAST of TCONS_00072862 vs. Swiss-Prot (Human)
Match: LMF2 (Lipase maturation factor 2 OS=Homo sapiens GN=LMF2 PE=1 SV=2)

HSP 1 Score: 369.007 bits (946), Expect = 9.665e-116
Identity = 226/565 (40.00%), Postives = 311/565 (55.04%), Query Frame = 1
Query:  460 VVFKTNLSSLPYGYYIFQFIRDILLLETGFLTIFVAQLF------NSKSGMNGG---HTAMAFWLVKWLLFRLMFQSGVVKLQSDCPTWWGLTALNWHYESQCIPAPLAWYAHQLPEWFQKLSVVATYVIEIALPFLFFLPIRSLRIWGFFSQILLQVLIIMTGNYTFFNLLTMTLCLSLIDDRFLFEYTPSFVGKYFQL--PKVTYEKRSIFRRLSVFLLKTAVTTTLIYWIVKYFNIRFAADSSQILSDIAFSKEEFKSAVTKLTRFSIYMGILSHLVHLVRYL---GDAAADDRKLKTLIRTFFAAIFATVAGWIFCISLVPFTQIDRSVQNDIWPVVKEWNNVVDSYELVHSYGLFRSMTGVGGRPEIIIEGTNDFRNGPWKEYNFKYKPGNLKTPLPVVAPHQPRLDWQMWFAALGSYQHNPWFIHLIYKLLEGEKDVLDLVGEN----PFPDKPPIYIRSRLYTYHYTTLSKQTTGIIDGVLRSRRIGSWWNRDSPKEYTPPLSVNDESLINYIKSLGWH-KQKLKKEKPNGKLYLFLKAVRKLLKNLDPTFFMFQIIL 2097
            +++   LS+   G     F  D LLLETGFL + VA L        +  G   G   H  + FWLV+WLLFRLMF SGVVKL S CP WWGLTAL +HYE+QC+P P AW+AH LP W  KLSVVAT++IEIA+P LFF PIR LR+  F+SQ+LLQVLII+TGNY FFNL+T+ L  +L+DD+ L         K      PK      S+   L+V+ L       L Y  V YF +        I S   F+  +F   +  LT  ++++G+ S +  L+  L          RKL  +++       ATVA  +F ISLVP++ ++      +W         V+  +L +SYGLFR MTG+GGRPE+++EG+ D  +  W E  F YKPGNL  P PVV PHQPRLDWQMWFAALG + H+PWF  L+ +LL+G++ V+ LV       PF  +PP Y+R++ Y Y ++   +Q              G WW R   +E+ P +S+ D +L   ++  G   K   +    N  L   L   R  L  L+    ++ +++
Sbjct:  106 LLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYGL-------LAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGT-ATVA--LFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH--WTEIEFMYKPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYWFSQPGEQ--------------GQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLM 644          
The following BLAST results are available for this feature:
BLAST of TCONS_00072862 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMF29.665e-11640.00Lipase maturation factor 2 OS=Homo sapiens GN=LMF2... [more]
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