TCONS_00072859 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072859
Unique NameTCONS_00072859
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072859 ID=TCONS_00072859|Name=TCONS_00072859|organism=Clytia hemisphaerica|type=transcript|length=2287bp
GTGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCC
AAAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTA
TGGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCA
GGGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAACTCAAAGG
GCAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAGGTTGGAG
AgtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGTCAGCTGT
AAAGTATGTGAAAAAGCTGGTGAATTATCTATAactcaaaaattgagtaa
aaagaaaactttgttGTGGTTTTCTCCAGCCCTTGGTCTTGATGTTTCCT
CTGGAATGGAATTAATTTGTCTCTATGGAATGGCTTTATCTATTGCTGCT
ATGATATCAAgtggttttcaaaacaaatttgtcttCATTACCCTATGGCT
ATTATATTTTTCAGTTTATCAGGTTGGCCAAACATTCCTTTGGTTCCAGT
GGGATATCTTGCTTTTGGAAACTGGATTCTTGACAATTTTTGTGGCTCAA
TTATTTAATTCAAAAAGTGGTATGAATGGAGGACACACAGCCATGGCTTT
TTGGTTGGTGAAATGGCTCTTATTTCGCTTGATGTTTCAGTCAGGAGTTG
TCAAATTACAATCAGACTGCCCTACTTGGTGGGGTTTAACTGCCCTCAAT
TGGCATTATGAGTCACAATGTATCCCAGCACCATTAGCCTGGTATGCCCA
TCAACTCCCAGAATGGTTTCAAAAATTGAGTGTAGTTGCTACATATGTCA
TTGAAATTGCTCTGCCATTCCTTTTCTTTCTCCCAATAAGAAGTTTGAGG
ATATGGGGTTTCTTCTCACAGATATTACTCCAAGTGTTAATCATCATGAC
AGGCAATTACACTTTCTTCAATCTTCTTACCATGACCTTATGTTTGTCAT
TAATTGATGATAGATTTCTCTTCGAATATACACCTTCATTTGTTGGGAAA
TATTTCCAGTTACCAAAAGTAACGTACGAAAAGAGAAGTATTTTCAGAAG
ATTGTCAGTGTTTTTACTAAAGACTGCTGTCACTACAACACTTATTTACT
GGATTGTGAAGTACTTCAATATTAGATTTGCTGCAGACTCATCACAAATT
CTTTCTGATATAGCTTTCAGCAAGGAGGAGTTCAAAAGTGCTGTTACGAA
ATTGACAAGATTTTCAATCTATATGGGTATCTTATCACATCTGGTGCATT
TGGTCAGATATCTAGGAGATGCAGCAGCTGATGATAGAAAATTGAAGACA
TTAATCAGAACATTTTTTGCTGCTATCTTTGCAACAGTTGCTGGTTGGAT
TTTCTGTATAAGTCTAgtaCCCTTCACTCAGATTGATAGAAGTGTTCAAA
ATGACATTTGGCCAGTTGTAAAGGAGTGGAACAATGTTGTTGATTCTTAT
GAACTTGTTCATAGCTACGGTCTTTTTAGAAGTATGACTGGTGTAGGAGG
ACGACCAGAAATAATTATTGAAGGAACAAATGACTTTCGAAATGGCCCAT
GGAAGgaaTACAATTTCAAATATAAACCAGGCAATTTGAAAACACCTCTC
CCAGTAGTTGCACCTCATCAACCGCGGTTAGACTGGCAGATGTGGTTTGC
GGCACTTGGATCATACCAGCATAATCCTTGGTTTATTCATCTCATTTACA
AACTACTTGAAGGTGAAAAAGATGTTTTAGACTTGGTTGGAGAAAACCCT
TTCCCAGATAAACCTCCTATTTATATCAGAAGCCGTCTGTATACATACCA
TTACACAacattatcaaaacaaactacTGGTATCATTGATGGTGTCCTAA
GATCAAGGAGGATAGGGTCATGGTGGAACAGAGATTCACCCAAAGAGTAC
ACTCCACCTCTCTCTGTCAATGACGAGTCACTCATCAACTACATCAAAAG
TTTGGGCTGGCACAAACAGaaactGAAGAAGGAAAAACCGAATGGGAAAC
TCTATCTTTTCTTAAAGGCTGTTAGAAAGCTGCTGAAGAACTTGGACCCa
acttttttcatgtttcaaaTAATCCTATTCTCtctcattttcaaatattt
ttaccatttataaatactttattcagattttatagaaaaactattttaga
ttttggaatttaaacaatattttgtagattttttaggATTTTCAGGGAAA
AACTACTTATTAGGCTTGCAACTTTTTAATAATAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:319726..331231+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072859 ID=TCONS_00072859|Name=TCONS_00072859|organism=Clytia hemisphaerica|type=transcript|length=11506bp|location=Sequence derived from alignment at scaffold_86:319726..331231+ (Clytia hemisphaerica)
GTGATAagtcaaaaaacaatgaaaataatgaTAAGTAGATGAATCAATCC AAAAATGTCTGAAGGAAATATCCATGTTCAAAGCCTTTTCATTTGGTGTA TGGCAGCCATTTACTTTTTTGCCTTCTCCTCACTTTACTTCCAAATCCCA GGTAAGCAAAGGTTCTTctccttttttcaaaattttgtccatACGTTTTT AAGATAACTTAATTGGATCAGCTCTTGTCATCTCTCGTTAGAACATTTTG acaatttgaaaaatcatttattcaagatttttttcaaaccaTTTTATCAA ACcattataaaaatttgaaatttttgttgttgctgGTATGACATGAATAA AAGTGTTGATAAAAAGTAGTCAGAAAATGTGATGTAATTTCTCCTGCCTC AACTTTAGGGTTGTATGGCAGAAAAGGGTTGATGCCAGCAGTAAAGGAAC TCAAAGGGCAATGTTTTGATTCTGATGAAAGATGTACAAACTGGGCTGAG GTTGGAGAgtgtaaaaataatcaaaattggATGGAAAGAAACTGTATGGT CAGCTGTAAAGTATGTGAAAAAGGTGAAAGCTCTTGcgtacctatcgatt ctatttTGACTCAATTTTCCCAAGGTTGAAAGAAGATTTAGTTAATATAT AATGACTCCAAATGATTTCAACCATCAAACCATGATTTTATGTTTGGTAC AATGATAGTTTTACTAAACCAATCCATCATTCTTTTTAGCTGGTGAATTA TCTATAactcaaaaattgagtaaaaagaaaactttgttGTGGTTTTCTCC AGCCCTTGGTCTTGATGTTTCCTCTGGAATGGAATTAATTTGTCTCTATG GAATGGCTTTATCTATTGCTGCTATGATATCAAgtggttttcaaaacaaa tttgtcttCATTACCCTATGGCTATTATATTTTTCAGTTTATCAGGTAAA TGTTTGAAAACTTGGTTTCTTTTAATATAATAATGCCAGATAAATCAGGC AAGCAAATACCACTGCACAGTGATGTTTTTTGTAGAAAATCAAGCAGGGT TAAGAATGAAAGTGTCATGGAACGATGGTCTGATTTGAcataatttttcc attttttgttaTTTATCAAAGGTTGGCCAAACATTCCTTTGGTTCCAGTG GTAAGTTTGGTTTTAAAGTTTCCTATCTATTCACTTGTTGCCAGCACACA TCTAAAAGTGTGGCCAGTCATATGCTCGTAAAGAAAGacaactttttgga aaatttttgaaattcagtcTTGAATGCATTACTTAATTATCCCATGAGAA ACTCTTaatattcttttatataatCCTTTCAGGGATATCTTGCTTTTGGA AACTGGATTCTTGACAATTTTTGTGGCTCAATTATTTAATTCAAAAAGTG GTATGAATGGGTAATTAATAATAGAATTTTATGaaacaaaatcatttgaa tATTTAATCATTAGATTCAGCACATCTTTTGTGCACCTTTTTTACCTCCC TTTCCCAATATGATCTTTCTCCCAAAGTAAAAAGGCATCCCTTCACCATT ATAATCAGTTGTTGCNTTCTATTTGtgctacaaacctcaaattaggctta aaatgttccttgggaaaAAGTAGGAATCGAATGTAGCAATTACATACCTC TACCAcatatataaaattcaaaagtcaGCTATTTAGGCCAAAATGGACCG ACACCAGGAAGACACTTGTTTTTGCctggaaataaaacctaaaatctgcG CTGTTGGtgctacaaacctcaaattaggcttaaaatgttccttggaaaaa agcagGATAAGAATGTAGCAATTATGTACCTCTTACCatgtatataaaat taaaaaaattaggtttGTAGGCCAAAATGGACGGAAACCGGTAAAACCCA GTGTCTTCCCGGTTTCCGTCCATTTTGACctgaaaacctaatttttttaa ttttatatacatGGTTAGAAGTACATAATTGCTACATTCTTATCttgctt ttttccaaggaacattttaagcctaatttgaggtttgtagcaCGAACAGC gcagattttaggttttatttccagGCAAAAACAAGTGTCTTCCTGGTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC GATTCCTACTTtttcccaaggaacattttaagcctaatttgaggtttgta gcacaaatagaacagattttaggttttatttccagGCAAAGCCTAGTTTC TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTAAGCATAATTTGAG GTTCATAGCAccaacagaacagattttagatttttttcccaggcaaaccc ttttttccccagtttcggtcaattttggccGAATATCcaaatcttttgaa gtttacatATATGGTAgaagtatataattgttacattctaatcctacttt tttccaacgaaTATTTTGACCCTAATTTGAGGCTTGTAGCACAAACAAAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNcaaacagaacagattttagatttttttccaggcaaaa ccctgttttttcgcaattttggtcaattttggccgaaaaacctaattttt taagtttatatatatggtagaggtatataattgttacattctaatNNNNN NNNNNCAAGGATCATTTTGAGCCTAATTTGATGgttgtagcaccaacaca gcaggttttagattttttttccaagcaaaatggcccgaaaatggcccatt ttgggTATAAAAAAGGGCGGAGAACCGCCAANCTTGAATAAGGTGATAAG TTCTGGAATCATCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGA TCCTGGtggcaaaataaaaataatttttttaaaaattaagtaGGCATAAA TGGAATTAAAATATCTACACTATTCTAAAACAATATGATTGTGATAGTTG TCAATTTTACAATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTA TTAAACCTATTTTTCCTCACTTATCAACCTCCCTATAAGGANTCTTAGAT TTATGTTATTTGGGTCccaaccaaccaaaaaaaattatgcaaacttaatt ttgaaaaaaaaggtctctATAGCCCACTGCTAGTGGTAAGTTTGGTTTTA AAGTTTCCTATCTATTCACTTGTTGCCAGCACACATCCAAAAGTGTGGCC AGTCATATGCTCGTAAAGAAAGacaactttttggaaaatttttgaaattc ggTCTTGAATGCATTACTTAATTATCCCATGAGAAACTCTTaatattctt ttatataatCCTTTCAGGGATATCTTGCTTTTGGAAACTGGATTCTTGAC AATTTTTGTGGCTCAATTATTTAATTCAAAAAGTGGTATGAATGGGTAAT TAATAATAGAATTTTATGaaacaaaatcatttgaatATTTAATCATTAGA TTCAGCACATCTTTTGTGCACCTTTTTTACCTCCCTTTCCCAATATGATC TTTCTCCCAAAGTAAAAAGGCATCCCTTCACCATTATAATCAGTTGTTGC TTCAAAGTAAAAGACGCTGCACCTTGAATAAGGTGATAAGTTCTGGAATC ATCAAGGAATTTTCAAATCATCCAAAACTTTTTCTCAAGATCCTGGtggc aaaataaaaataatttttttaaaaattaagtaGGCATAAATGGAATTAAA ATATCTACACTATTCTAAAACAATATGATTGTGATAGTTGTCAATTTTAC AATCATAAGTTCAATGGAGACTTCAACCACCCTTATTTTATTAAACCTAT TTTTCCTCACTTATCAACCTCCCTATAAGGATTATCTAGATTTGGTTCTA GCAATTCTGTCTAACTGAGCTAAATCGTAAGTCTTCTTCTTACTTATACA ATAACCCTCCTTTTCTTGGGCTAAAACACGcaataaaaacttctttttaG AGGACACACAGCCATGGCTTTTTGGTTGGTGAAATGGCTCTTATTTCGCT TGATGTTTCAGTCAGGAGTTGTCAAATTACAATCAGACTGCCCTACTTGG TGGGGTTTAACTGCCCTCAATTGGCATTATGAGTCACAAGTATGAATAAA AATAACCCAACTCTTTATGCCAGGGTCTACTCTACAGCTTTGCAGGTTTC AACATCAAGTGCCCTTTTGTTCAGCGAAAAATTCTGCATTCTATAATAAT GGGAATAACTCTCAAAAATGTTAGGCAGAATTTTACATTTAGTTCTATGA TTTTTCAAGTCTTGATTTGCTAAGTTTAACACTCACTatccttttctttc tttttgcctTACGTCNTTGCTAAGTTTAAAGGATAACTCTCACTATCCTT TACTTTCTGTTAGCCTTACATGATCATTTTCTTTAACTGTTTATAGTGTA TCCCAGCACCATTAGCCTGGTATGCCCATCAACTCCCAGAATGGTTTCAA AAATTGAGTGTAGTTGCTACGTAAGTTTTGTAAATATTTGTAAACACAAC CCCAAAAGTTAATCCTAGCAAAGTTGATATATTTTTGTATTCCAATGAGT CATTAGACACAACAAACACAAAAGATTTGGGCCTTCTTTTGAATGTCTTT TTAAAtcatacacccccttctcacagacccagtaggattttttcagccac aGACTGAAACTCAATGAGGATTGATATactcatttttttatgaatgaaaT TGGACcagcaattttattttattttaaacaatataTTTCGAATACTTGTG ATTCATCTTCAGgttctaaaatataaaatagtaaaacagttaaaaccatt tagtaaaaatataaatttcccATAACACGCATACATACAACCTACTCTGA TCAAAGAACTAATGtaactaaaaaatcaaaatcaaaattcactAAATCAA AAGTGAATTCcacttttttatggctggggatttcaattcttttgtttcca aattaaaaaattcagtggggatgggataAATAGCAAGAAATTTTCTATTG AAGATTGgttcatttgattattttcagtgggggacaaaaattggaggata attttccaccagggatgatattttggccaatttttttaGTGGGaccccag tgggtctgtgagaaagagGTGTAATCATGCTTTcacaaattcaaaaatct tttttcgtggGAAACTTGTGAAATCTTGATAAGCTGGGCCATATCTGGAC CTCTGAATACCCCTGAATATGGAAAATATTGACTATATataatcaggcta tttagagcataATTAAAGGGAATCTTTAAagcagctgaaaatattttcca acaGGAGAGTTCTGGTAAGATCCCAATGTTATTTAGTTTGACATTTGCAG atggcattttcattttcttgtcTTGTCTTATTTCAGATATGTCATTGAAA TTGCTCTGCCATTCCTTTTCTTTCTCCCAATAAGAAGTTTGAGGATATGG GGTTTCTTCTCACAGGTAAGATATTGGgtatatatttttacaaaatgtcG TTATGTTGTTCCAAGAAATCTATAAAGGTACTTGCATCGTTTCTATGATG TCCACAGCCATTAAAGTAGCAATTTCTGAGTTCAATGGAAATTGGAAAGA TGTGTTTAGGGCACTGTTAATTAcaattttgaactttaaacaaaataata ataattctaTTCTCCTATCTCAATGGAATAGGAGAAAattatttgattta tttattatcttttttGGCAGATATTACTCCAAGTGTTAATCATCATGACA GGCAATTACACTTTCTTCAATCTTCTTACCATGACCTTATGTTTGTCATT AATTGATGATAGATTTCTCTTCGAATATACACCTTCATTTGTTGGGAAAT GTAAGTTTCAGCAGTTTTTTTCTGCACAACACGTAAATTATTATAAAGCT TTTTTCTTTCCTTATGTTAATGGATAATgccttttcttttatttgatttt aatgaTTGTCTTTTGGCTATGCAAATGAACAACCTCTCAATTTATCTCTT CTAAAGATAGTCAAAGCTAGCCAAAACTAACTACCTAAAATCTACTTTTA CACACATTGAACTTAATTTCGTGATGCAAAATCTTTTCTAGATTTCCAGT TACCAAAAGTAACGTACGAAAAGAGAAGTATTTTCAGAAGATTGTCAGTG TTTTTACTAAAGACTGCTGTCACTACAACACTTATTTACTGGATTGTGAA GTACTTCAATATTAGATTTGCTGCAGACTCATCACAAATTCTTTCTGATA TAGGTAATTATTTAGTATTTATTTTATTacttgaattttgttttttttac tcaAGAAAAAGCACATAAAGAAAACCAGAGAAAACTAAAAAGACCTTGAT GAATATCAAGTGACAACTATCAGTTTTGTCTGATTTCTTTTATCTGAGAA TTTTAGACATTTATGATGCAAAAATGTTACACTTCTTCTATAGAGTGCCA TCCTGGCTAAAAGTGCCGCATGCTAAACCCTGCAACGTAATAATTGGAAT ATTGAAAGCTTACACACCAGAATCAGAAAGTCTTTTGTACTAAGTACCAA ActtcaaatttccaaattcaGTTATTAAGTTGAAGTGTGTTAAAATATAG TTTTGATTCAAGGTGACAGACAAGGCATCATGGgcccggcgagccatttt gagtgagagggccaacatttttttcatgctcaaaacaccttaaaacgata tccatttggggagaataatagtttttgtggtttgatttggtctcaaacca gcttgAAATAGTAACTCTTTAAAACGTATGATatggtctaccaaaaagtg gggggggggcatggaTCCCCCAGCCCCCCCTGTTGATGGGGCCCATGGac atcaaaaatttgaatgaattttcacattttgatttttccgtCTTCCAGCT TTCAGCAAGGAGGAGTTCAAAAGTGCTGTTACGAAATTGACAAGATTTTC AATCTATATGGGTATCTTATCACATCTGGTGCATTTGGTCAGATATCTAG GAGAGTAAGTtcaatcaaagaaaaattcTGATTTCTTGATTCTAATGTTT CAGAGGATATTATTTAACCTGAAGCTCTTGAAAATAACCTTAATTGCATC CCTCCATCAGCCAGCTTGGATTCTAGTCTTTCTCACTCACAATTTTTGCA AACAAGTAACCATATAAAGCAAGAATTAAGTTCTCATTTTTATCAGAAGT TTGGTTTCTTCTAAAATACTTTCATGAAACTCAACTATAAAGTTAATTTT CCATTTGCAATCATGTTTACAGTCAAtggtgttttttattttcattgtga TTTTCATCTTTTCAGTGCAGCAGCTGATGATAGAAAATTGAAGACATTAA TCAGAACATTTTTTGCTGCTATCTTTGCAACAGTTGCTGGTTGGATTTTC TGTATAAGTCTAGTAAGTGTACAATTCCTGGGATGTGTTAAACAGTTAGT TATACTTTTAGAATTTGGGATTTATCttctaatctacctgcaccaagttC AGATTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTTAATCAATTAAGAAAGTTATTAAGATC TTTTTCTTAGTTTTAGTAGACTGAAATTCTTTATCGAGTCATTGCTCATC AACTAATTTTCTAACaacttttcttcaattttcaggtaCCCTTCACTCAG ATTGATAGAAGTGTTCAAAATGACATTTGGCCAGTTGTAAAGGAGTGGAA CAATGTTGTTGATTCTTATGAACTTGTTCATAGCTACGGTCTTTTTAGAA GGTATGAATTACAAAATAATTCTTCAACAGTTTTTTAAGTAAAACCATAT AGTAACCAGTGTTGCAAATAAGGAATTTCAAGTTGGCCGGTGATTACTCA ATCAGAAAGCTCACTAATAATGAAACTATCAAAATTTCATGGGAAAAAAA CACACATATTAGCTTAAAAATGacaccggccgttatttgcagcactggtA ACTACTCCATTCGTTTACTATAGCCACTTGTACCAAAGTAGTATATTATT AATTCAATTTAGTATGAAAAGGATGACTAATAAAAAATTGGATTTGTTTT CATCCTTTCAGTATGACTGGTGTAGGAGGACGACCAGAAATAATTATTGA AGGAACAAATGACTTTCGAAATGGCCCATGGAAGGTTAGAAGCTTGTTGA TTTAcagaagttttttttcttcaaaatgatgATAAGAAACACTATCTCTT TATATTAACTCAGGTATTTGAAGTTCCAAGTACTTGTGAATTGCTCTAGT AAGAggttctgatatgaaatattggaagaaaaattaagaatcaaaatctt tttaattttaggaaTACAATTTCAAATATAAACCAGGCAATTTGAAAACA CCTCTCCCAGTAGTTGGTAAGTTATGTGTTGTACTGCTACTGAACCCAAA TACTAACTTCAGTGTAAACTGCTGCTTTACACTGGGAATTTATAAAATCG CCATATTGACTCATAGACAAAAGAAACGAGATGGGATGAGATGGCACATC TCCTtgcaataaattttcaaaagtgctAAAAGATAAATACTGACCAGACA TCCCCTTCAATGAACTTGATATCCCTTGAAAAACATAcatgaaaattttg taaatgcaaggctcgaaataacgatttcgAGTGGGTCGGACAAAAGGTCC AATCaaggttgctttagcttgaaaattatatgaTTATTCGGTCAgacatg aagctatttgggttGGACAATGTCAGATGTCAGATAGTAATTTTAAACCT TGTAAATGTTATCTTTTCTCATAGCACCTCATCAACCGCGGTTAGACTGG CAGATGTGGTTTGCGGCACTTGGATCATACCAGCATAATCCTTGGTTTAT TCATCTCATTTACAAACTACTTGAAGGTGAAAAAGATGTTTTAGACTTGG TTGGAGAAAACCCTTTCCCAGATAAACCTCCTATTTATATCAGAAGCCGT CTGTATACATACCATTACACAacattatcaaaacaaactacTGGTATCAT TGATGGTGTCCTAAGATCAAGGTAAGGACATTGTACTCAACAAAATGCCT TCTAACTCTTTGTTCATTAACTTGGGTTTGAGAAAATTACTATTTTTTAG TAATAACTCACTCATCTAGATAACAAACAGTAGCTCTTTTAGCAGTATAT TTCACAGCGGCCAAATTTAACAATCGTCGATATCATTTGAAGTAGCATTA TATTTTGTATTCCCTGATTGAATTTACCTTCGCAAATGTTCACCATTATT ATTTTGCTTTGATATTATTTTCCACCAAGGCGAAccctaaaaaatttttc atttccgGTCCACCAAAGCTTTTTGTAATTAATAGCATTTCTTTCAGTGA AAAAGAGAACAAATATAAAGACAGAATGTGGGGTAACACTAAAAGCCAGA GagctgatttttttcttccaaacttttttattagaaatcatGAAAAGGTG GACCGGAAACGAAAAAAATTTTAGGGTCGGCCCAGACTCTCGGATTAAAA GCCTTGAAagaatctttgatttttttatttgttgataGGAGGATAGGGTC ATGGTGGAACAGAGATTCACCCAAAGAGTACACTCCACCTCTCTCTGTCA ATGACGAGTCACTCATCAACTACATCAAAAGTTTGGGCTGGCACAAACAG GTATGCCTACAATAACCTTTAAGAGttcctttgaaaaaagttttttcagc aCTGATTGGAGcaggtttttttgaaaaaaaagtgtgaaaattgttgaaaa tcaGAGTCAGTTTATATACAAAAgctatatttgaaaaacataaaatttat tGGATACAACTTTTGATACCCGTACTACTGTCTAACCCTGTCAAATTTAT GCTTAGTTTCCAGAGAGGTTTCAATCCTTTTAAAAGCTGAAACCCCTCTT TTCAATTGGAAAAAGTTTTATTCCCTCTATATCCcttcttgaaaaattta gatCCTTCCTTAAAAAAGGAGGCGggacagcaaaaaaaattactgaGGCA GTGGGTCTTTCAAATGCTGTTAATACAGTCAGGGACCCTTATTCTGTTTA CACAACATCTTGtttctttcttgattttttataaaaaaattagaaacgTG CAATTATTATTCGGACTTTATTGCTTATTATACTTCTCTGTTAGTGTTTA AAAGAGTATTGTCtagtcaattttattttttctttcagaaactGAAGAAG GAAAAACCGAATGGGAAACTCTATCTTTTCTTAAAGGCTGTTAGAAAGCT GCTGAAGAACTTGGACCCaacttttttcatgtttcaaaTAATCCTATTCT Ctctcattttcaaatatttttaccatttataaatactttattcagatttt atagaaaaactattttagattttggaatttaaacaatattttgtagattt tttaggATTTTCAGGGAAAAACTACTTATTAGGCTTGCAACTTTTTAATA ATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045219XLOC_045219Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072859-exon-scaffold_86-1491911889:319726..319876TCONS_00072859-exon-scaffold_86-1491911889:319726..319876Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:319726..319876TCONS_00072859-exon-scaffold_86-1510915933:319726..319876Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:319726..319876TCONS_00072859-exon-scaffold_86-1575043694:319726..319876Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:320134..320298TCONS_00072859-exon-scaffold_86-1491911889:320134..320298Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:320134..320298TCONS_00072859-exon-scaffold_86-1510915933:320134..320298Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:320134..320298TCONS_00072859-exon-scaffold_86-1575043694:320134..320298Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:320465..320670TCONS_00072859-exon-scaffold_86-1491911889:320465..320670Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:320465..320670TCONS_00072859-exon-scaffold_86-1510915933:320465..320670Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:320465..320670TCONS_00072859-exon-scaffold_86-1575043694:320465..320670Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:320847..320875TCONS_00072859-exon-scaffold_86-1491911889:320847..320875Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:320847..320875TCONS_00072859-exon-scaffold_86-1510915933:320847..320875Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:320847..320875TCONS_00072859-exon-scaffold_86-1575043694:320847..320875Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:321058..321135TCONS_00072859-exon-scaffold_86-1491911889:321058..321135Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:321058..321135TCONS_00072859-exon-scaffold_86-1510915933:321058..321135Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:321058..321135TCONS_00072859-exon-scaffold_86-1575043694:321058..321135Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:324226..324364TCONS_00072859-exon-scaffold_86-1491911889:324226..324364Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:324226..324364TCONS_00072859-exon-scaffold_86-1510915933:324226..324364Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:324226..324364TCONS_00072859-exon-scaffold_86-1575043694:324226..324364Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:324672..324745TCONS_00072859-exon-scaffold_86-1491911889:324672..324745Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:324672..324745TCONS_00072859-exon-scaffold_86-1510915933:324672..324745Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:324672..324745TCONS_00072859-exon-scaffold_86-1575043694:324672..324745Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:325662..325740TCONS_00072859-exon-scaffold_86-1491911889:325662..325740Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:325662..325740TCONS_00072859-exon-scaffold_86-1510915933:325662..325740Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:325662..325740TCONS_00072859-exon-scaffold_86-1575043694:325662..325740Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:325996..326125TCONS_00072859-exon-scaffold_86-1491911889:325996..326125Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:325996..326125TCONS_00072859-exon-scaffold_86-1510915933:325996..326125Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:325996..326125TCONS_00072859-exon-scaffold_86-1575043694:325996..326125Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:326367..326528TCONS_00072859-exon-scaffold_86-1491911889:326367..326528Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:326367..326528TCONS_00072859-exon-scaffold_86-1510915933:326367..326528Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:326367..326528TCONS_00072859-exon-scaffold_86-1575043694:326367..326528Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:327174..327279TCONS_00072859-exon-scaffold_86-1491911889:327174..327279Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:327174..327279TCONS_00072859-exon-scaffold_86-1510915933:327174..327279Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:327174..327279TCONS_00072859-exon-scaffold_86-1575043694:327174..327279Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:327591..327687TCONS_00072859-exon-scaffold_86-1491911889:327591..327687Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:327591..327687TCONS_00072859-exon-scaffold_86-1510915933:327591..327687Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:327591..327687TCONS_00072859-exon-scaffold_86-1575043694:327591..327687Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:328411..328526TCONS_00072859-exon-scaffold_86-1491911889:328411..328526Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:328411..328526TCONS_00072859-exon-scaffold_86-1510915933:328411..328526Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:328411..328526TCONS_00072859-exon-scaffold_86-1575043694:328411..328526Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:328837..328909TCONS_00072859-exon-scaffold_86-1491911889:328837..328909Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:328837..328909TCONS_00072859-exon-scaffold_86-1510915933:328837..328909Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:328837..328909TCONS_00072859-exon-scaffold_86-1575043694:328837..328909Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:329087..329141TCONS_00072859-exon-scaffold_86-1491911889:329087..329141Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:329087..329141TCONS_00072859-exon-scaffold_86-1510915933:329087..329141Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:329087..329141TCONS_00072859-exon-scaffold_86-1575043694:329087..329141Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:329550..329796TCONS_00072859-exon-scaffold_86-1491911889:329550..329796Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:329550..329796TCONS_00072859-exon-scaffold_86-1510915933:329550..329796Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:329550..329796TCONS_00072859-exon-scaffold_86-1575043694:329550..329796Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:330314..330425TCONS_00072859-exon-scaffold_86-1491911889:330314..330425Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:330314..330425TCONS_00072859-exon-scaffold_86-1510915933:330314..330425Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:330314..330425TCONS_00072859-exon-scaffold_86-1575043694:330314..330425Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1491911889:330964..331231TCONS_00072859-exon-scaffold_86-1491911889:330964..331231Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1510915933:330964..331231TCONS_00072859-exon-scaffold_86-1510915933:330964..331231Clytia hemisphaericaexon
TCONS_00072859-exon-scaffold_86-1575043694:330964..331231TCONS_00072859-exon-scaffold_86-1575043694:330964..331231Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:319726..331231 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.03075 7.18872 1.65419 1.55113 4.75784 4.33225 3.56705 4.34549 3.70378 3.46731 3.8126 2.50626 4.48276 4.95195 3.30957 5.49467 6.99678 5.42849 2.52745 4.23162 3.79177 6.1093 8.87776 7.23574 2.23766 4.47611 6.34308 7.09648 8.01774 9.89151
Blast
BLAST of TCONS_00072859 vs. Swiss-Prot (Human)
Match: LMF2 (Lipase maturation factor 2 OS=Homo sapiens GN=LMF2 PE=1 SV=2)

HSP 1 Score: 442.58 bits (1137), Expect = 1.048e-143
Identity = 277/707 (39.18%), Postives = 388/707 (54.88%), Query Frame = 1
Query:   64 GNIHVQSLFIWCMAAIYFFAFSSLYFQIPGLYGRKGLMPAVKELKGQCFDSDERCTNWAEVGECKNNQNWMERNCMVSCKVCEKAGELSITQKLSKKKTLLWFSPALGLDVSSGMELICLYGMALSIAAMISSGFQNKFVFITLWLLYFSVYQVGQTFLWFQWDILLLETGFLTIFVAQLF------NSKSGMNGG---HTAMAFWLVKWLLFRLMFQSGVVKLQSDCPTWWGLTALNWHYESQCIPAPLAWYAHQLPEWFQKLSVVATYVIEIALPFLFFLPIRSLRIWGFFSQILLQVLIIMTGNYTFFNLLTMTLCLSLIDDRFLFEYTPSFVGKYFQL--PKVTYEKRSIFRRLSVFLLKTAVTTTLIYWIVKYFNIRFAADSSQILSDIAFSKEEFKSAVTKLTRFSIYMGILSHLVHLVRYL---GDAAADDRKLKTLIRTFFAAIFATVAGWIFCISLVPFTQIDRSVQNDIWPVVKEWNNVVDSYELVHSYGLFRSMTGVGGRPEIIIEGTNDFRNGPWKEYNFKYKPGNLKTPLPVVAPHQPRLDWQMWFAALGSYQHNPWFIHLIYKLLEGEKDVLDLVGEN----PFPDKPPIYIRSRLYTYHYTTLSKQTTGIIDGVLRSRRIGSWWNRDSPKEYTPPLSVNDESLINYIKSLGWH-KQKLKKEKPNGKLYLFLKAVRKLLKNLDPTFFMFQIIL 2127
            G+   + LF+  +AA++ FAF+SLY QIPGLYG +G++PA + L+ Q              G+ +  Q W                         +  TLLW +P LGLD + G+EL+ L G  +++ A++ S  ++  +++ LW  Y S  QVGQ FL+FQWD LLLETGFL + VA L        +  G   G   H  + FWLV+WLLFRLMF SGVVKL S CP WWGLTAL +HYE+QC+P P AW+AH LP W  KLSVVAT++IEIA+P LFF PIR LR+  F+SQ+LLQVLII+TGNY FFNL+T+ L  +L+DD+ L         K      PK      S+   L+V+ L       L Y  V YF +        I S   F+  +F   +  LT  ++++G+ S +  L+  L          RKL  +++       ATVA  +F ISLVP++ ++      +W         V+  +L +SYGLFR MTG+GGRPE+++EG+ D  +  W E  F YKPGNL  P PVV PHQPRLDWQMWFAALG + H+PWF  L+ +LL+G++ V+ LV       PF  +PP Y+R++ Y Y ++   +Q              G WW R   +E+ P +S+ D +L   ++  G   K   +    N  L   L   R  L  L+    ++ +++
Sbjct:    3 GSRLPRQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLRPQ--------------GKGRWQQLW-------------------------ETPTLLWEAPRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYGL-------LAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGT-ATVA--LFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHH--WTEIEFMYKPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYWFSQPGEQ--------------GQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLM 644          
The following BLAST results are available for this feature:
BLAST of TCONS_00072859 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LMF21.048e-14339.18Lipase maturation factor 2 OS=Homo sapiens GN=LMF2... [more]
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