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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072829 ID=TCONS_00072829|Name=TCONS_00072829|organism=Clytia hemisphaerica|type=transcript|length=180bp
CGATGATCCTGAACCAACAGAAGAATTTTCTATTGAAAGACTTCTTCACG
ATTTTGCTTCTATCGGTACCTCAGAGGATGGTGAATTGGCCGAATCTTTA
GACAACAAGTATCAAGAtcctttatctttttttgctgatgacaaCGAGGA
TGATGACATCTTTGAAGACTTTTATTGTAA Run BLAST on NCBI transcript from alignment at scaffold_86:105647..106887+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072829 ID=TCONS_00072829|Name=TCONS_00072829|organism=Clytia hemisphaerica|type=transcript|length=1241bp|location=Sequence derived from alignment at scaffold_86:105647..106887+ (Clytia hemisphaerica)
CGATGATCCTGAACCAACAGAAGAATTTTCTATTGAAAGACTTCTTCACG
GTGTGTAATGCAACCCAGttcaatatattttatttttaagaaaaagagtT
TCATTCTGTGCTTTTTTAGTCTCTCCTTCTCAGCCTTTCATAATTTAAGG
TTGTACAcgagctttttttataagcatagtgTACTTTGGCTTAGGGTAAA
CATAatacttatttttctattgttctaaacaatatgCCTGTTTGTTCTAA
CTTCGAAATCTGACCCTGATATTCtaatagaagttattcttataaaataa
gcgTGTGATTTTATACGGCACAGTGGCTGGGTGGGCTGAATCAGAGAGAG
GTTTTTCGTTTCGTGACCCTTTTACACAAGACTAGgaagtttcactttcg
tttttctgactttcaacGATTTCATTTTTAACTGTAAAAATAATGTGCGG
ATTGAGATCTATCATGGATATGTCCAGGAAAAGCCAAAGACTGTATATAG
GAAAGTATAAAAATCTTTTGGGTCTTTTGCCTGGGTACTTTTAAGACTAG
AAGATGAGGAACTATCATTTGCAGATCATTTGGGTTTATCTAGCtatatt
ttataatattttaatttttttacttgggTAGCTACATTTTATCCTGCTGA
ACTCAGAgagtatatttttattatttattatattaGAGTTGGTCTTTAAT
ACTTTGCTTGTGTACCTTTCTGAACTCAAAAGGCTATGTAAAGTTTAGGG
GCGCATCCATACTATTATAGTACTTACGTACACAGTGAATGGGGGGCGTT
GGGGTTTAGCAAAAGTGTACTCTGTCCAGCTCTGTCAACGACCCTTTTCT
GAACATTTCTTGGTCATGATGTTCGGGCTAAAATAGCAAAACACATTTTT
TGCCTAAACATGTGTCAGGTCCAAGCTCAAACAGTGATTTTCGTTAAGTA
GTGAGAATTACACGTTCACccaaaactttgatgaaaagaaaacaaaatcc
tGGATTTCTCTCTTCAAAAACCTGGTCCAACCATGCAGGGACCAGTCCAG
GAATTAGACAAGGTGTGTCAGCATTACATGAAGTTATACGGTATATAAAT
CGACTTTTTAGATTTTGCTTCTATCGGTACCTCAGAGGATGGTGAATTGG
CCGAATCTTTAGACAACAAGTATCAAGAtcctttatctttttttgctgat
gacaaCGAGGATGATGACATCTTTGAAGACTTTTATTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072829-exon-scaffold_86-1491911889:105647..105696 | TCONS_00072829-exon-scaffold_86-1491911889:105647..105696 | Clytia hemisphaerica | exon |
| TCONS_00072829-exon-scaffold_86-1510915933:105647..105696 | TCONS_00072829-exon-scaffold_86-1510915933:105647..105696 | Clytia hemisphaerica | exon |
| TCONS_00072829-exon-scaffold_86-1575043694:105647..105696 | TCONS_00072829-exon-scaffold_86-1575043694:105647..105696 | Clytia hemisphaerica | exon |
| TCONS_00072829-exon-scaffold_86-1491911889:106758..106887 | TCONS_00072829-exon-scaffold_86-1491911889:106758..106887 | Clytia hemisphaerica | exon |
| TCONS_00072829-exon-scaffold_86-1510915933:106758..106887 | TCONS_00072829-exon-scaffold_86-1510915933:106758..106887 | Clytia hemisphaerica | exon |
| TCONS_00072829-exon-scaffold_86-1575043694:106758..106887 | TCONS_00072829-exon-scaffold_86-1575043694:106758..106887 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:105647..106887 + |
Blast
The following BLAST results are available for this feature:
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