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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072810 ID=TCONS_00072810|Name=TCONS_00072810|organism=Clytia hemisphaerica|type=transcript|length=512bp CACGGGACTTTCTATTTTGTTGTTTACTTTCATAAAATTATCCTCGCCGT AACACCAAGCGCTATTTTTATCAGTCTTTTTCAGAGATATATTATAAAAA GTGGATTGATACTTAAAGAATGATACTATATTTAGTTGGGATTTACAATT TGGGATCAGGATGAAAAGATTTCAAATGCTTGTTTCCAGAAGAGTTTCGT GGCGAATTCATAGAAGTCAGTCCACATTGACAGCAAATCAGCAGAAGCTA ATGGCAAGAGGACTTCCAAAGAAGCAGCCTATTCAAGGGGTTCAAAACAT TGTTGTGGTGGCCTCAGGAAAAGGAGGAGTTGGGAAATCAACAACTACAG taaATCTCGCAATGGCAATGATGGCAAGTCAAAAGGTATTATGGTTTTTA TTCTCAGCAAAGGTAGCATGTTTTTCTATGCTAGGATTTTGAAAATCATG TATACAGTAGACTCTTGGTTATTCAAAGCACCAAATGGGGTAAGAATTTG CCTCGAATAACT Run BLAST on NCBI transcript from alignment at scaffold_84:314664..316145- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072810 ID=TCONS_00072810|Name=TCONS_00072810|organism=Clytia hemisphaerica|type=transcript|length=1482bp|location=Sequence derived from alignment at scaffold_84:314664..316145- (Clytia hemisphaerica) CACGGGACTTTCTATTTTGTTGTTTACTTTCATAAAATTATCCTCGCCGT
AACACCAAGCGCTATTTTTATCAGTCTTTTTCAGAGATATATTATAAAAA
GTGGATTGATACTTAAAGAATGATACTATATTTAGGTAAGCTGTAGATTT
ACTTTACCGAACAAGACCAAAAAAGCTATGTAAAACCATAAGAGATGTTT
TTCAAATCCACATGGCATCCATATGGTCGTCGATAGAATCAAAACAAATC
ATCGACGACTTCTTGCCTTTTGTTGATATCTTTTTCAGTTGGGATTTACA
ATTTGGGATCAGGATGAAAAGATTTCAAATGCTTGTTTCCAGAAGAGTTT
CGTGGCGAATTCATAGAAGTCAGGTATAAGTGTTGAAGTTTTCATTTCAC
TTGAAAGTCGTTTGTATCATCGATGTAATCTTGAAATATTTTATAAAAAT
CATAAATTTTACATGCATTTGGTCGTAAAATTAAAGGGACAACAAAAATA
TGTTCATAGTTTCTCCCGCTATTACCACTGCCCACTGTACCAATTTTTAT
AAAACCTCTTTTTTCCTCTACATTTGAGAGAAATTTTAGATTTGATCAAC
TTTTTTTTGGGGGGGGGGCCACATATATATATATTATAGACCTTTTTTTA
AAGAGGCAGCCATGTTGAATAATTATGTACTCCAGCATAAAAGCAATGAT
ACAGCCATGCATAATTTTTAAAATATGCACGATACAGTAATTAGATTACT
ATAGAGATTTTTTTTTAATTTATCACACGTTTTGTCATAATGACAATTTG
CAGCCCCTTATGTTTTTGCATCTTCCTGCGCAAAATTTCAATAAATTAAT
GAAATAATGATAAATTATATTCTCATACTTACTAGTCCACATTGACAGCA
AATCAGCAGAAGCTAATGGCAAGAGGACTTCCAAAGAAGCAGCCTATTCA
AGGGGTTCAAAACATTGTTGTGGTGGCCTCAGGAAAAGGAGGAGTTGGGA
AATCAACAACTACAGGCAGGTCAAAATATTCTACTGACAGGCCATATTTT
AGAAAGGCAAGGCAGCGTCCGTTGGTAACCAAAAAGGGCACTTTTTCCTG
TGTTTTTTCACTAAAAAGGCTGTTTTTACCAATATTTTTGTAGTTTCAAG
AGGGGCAGCGTCCGATAACCGGACGCTTAAAGGGCATGAAAAATGGCCTG
ACTGATGTTGTATTTTTAAATACACTTTTATAGCAGACTACCAAAACTAT
TCACCATATAGAATAGAAAACAGGAGATGGTATTGTATGGTAAAATTGTA
ATTTATTTTTTTCATTTTAGTAAATCTCGCAATGGCAATGATGGCAAGTC
AAAAGGTATTATGGTTTTTATTCTCAGCAAAGGTAGCATGTTTTTCTATG
CTAGGATTTTGAAAATCATGTATACAGTAGACTCTTGGTTATTCAAAGCA
CCAAATGGGGTAAGAATTTGCCTCGAATAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00072810-exon-scaffold_84-1575043694:316011..316145 | TCONS_00072810-exon-scaffold_84-1575043694:316011..316145 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1575043694:315773..315857 | TCONS_00072810-exon-scaffold_84-1575043694:315773..315857 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1575043694:315131..315260 | TCONS_00072810-exon-scaffold_84-1575043694:315131..315260 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1575043694:314664..314825 | TCONS_00072810-exon-scaffold_84-1575043694:314664..314825 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1510915933:316011..316145 | TCONS_00072810-exon-scaffold_84-1510915933:316011..316145 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1510915933:315773..315857 | TCONS_00072810-exon-scaffold_84-1510915933:315773..315857 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1510915933:315131..315260 | TCONS_00072810-exon-scaffold_84-1510915933:315131..315260 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1510915933:314664..314825 | TCONS_00072810-exon-scaffold_84-1510915933:314664..314825 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1491911889:316011..316145 | TCONS_00072810-exon-scaffold_84-1491911889:316011..316145 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1491911889:315773..315857 | TCONS_00072810-exon-scaffold_84-1491911889:315773..315857 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1491911889:315131..315260 | TCONS_00072810-exon-scaffold_84-1491911889:315131..315260 | Clytia hemisphaerica | exon |
TCONS_00072810-exon-scaffold_84-1491911889:314664..314825 | TCONS_00072810-exon-scaffold_84-1491911889:314664..314825 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_84 | supercontig | scaffold_84:314664..316145 - |
Blast
The following BLAST results are available for this feature:
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