TCONS_00072776 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072776
Unique NameTCONS_00072776
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2636

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072776 ID=TCONS_00072776|Name=TCONS_00072776|organism=Clytia hemisphaerica|type=transcript|length=2636bp
TTTTTTAGAGCTTCCAAAATAAAACGAGTTATGTTGTCTTACAATGCCAG
CGCCAACATTGCTTAGTTTAGTAAAAGGACCTCCACAACAACAACGAGCA
ACAGAAGATACAACAATCCAGCAACAAGATACAACAGACAACAGACAAAC
ATTAGCTGCAGCACCAGAACAAATAGTTCCTCACGCTGAACAAGCAGTTG
CATCTACACCTCAGTCCACATATAACAATAACTCACCACCTCCAAAAGAC
ATCacaaagacttcaaaaatgggcGGCGGAAAATTAAACGTCAAAATTGT
TAATGGAAGGGGACTTCAGAATAAAGATACGTTTAGCAAGAGCGATCCTT
ACTGTATGGTTGAATTAGGCAACAAATCGTTCAGTACGAAACATATGAGT
GACAATTTGGATCCTGATTGGAACGAACAGTTCAGTTTTGACGTAACCGA
AGGACAAGATGTTTTAGCATTATCTGTCTGGGATAAAAACAAGATCTCCA
AAGATGTTTTTATGGGATACagttttgtttcttttgataACTGCAAGAAG
GACCAACCCACAACTAAGAGTGCACAAATGATGGGTGGTTGCAAAGGAAC
AATCAATCTTATCATCACAGCATCATTCGAGACAAGTGCAAGTGCTATTG
ATCGATTAGGTGGACAACTTCAACAAACAGCAGCTGATGCTGATAAATAC
AAGTGTGATTCTGAACGCCTTGGAGCTGAAGTAAACCGTATGTCAGCCGA
AAATGACNACTTCAACAAACAGCAGCTGATGCTGATAAATACAAGTGTGA
TTCTGAACGTCTTGGAGCTGAAGTAAACCTTATGTCAGCCGAAAATGACC
GATTCTCTGCCAATAACAAAAAACTCGAggaagaaaataagaaatttgag
GAAAACAATAACCGTTTAGAAGCATCTGTCAATAAATTGGAAGGAGAGAA
TAAGAAGTTTGAAGAAAATAACAACCGCCTTGAATCCTCTGTCAACAAAT
TAGAAGGCGAAAatcaaaagtttgaagaaaacaaTAAGAAGcttgaagaa
gaaaacaataaatttcAGGAAAACAATGCCAAATTAGAAGCTGAAGTGAA
CCGCCTTGGAACTGAAGTAAACCGAATGACAGAggagaataacaaatttg
ctgaaaacaacaagaaacttGATGAAAATGTCGGACGTCTGGAAGGAGAA
GTTGATAAAATGGGGCAACTCAACAAAGAGTTTGAAGAAAACAATAATca
attgaaagaaaatgtcaacAAACTTGAAGGAGAAGTCAACAAGATGACTG
AAGAAAACAACAAATTCGCTGAAAACAACAAAGCTCTCGAAACACAAGTT
AATGGACTTAAGGATGAGGTTAACAAGATGAGTGAAGAGAACAATAAATT
TTCTGCAAACAACGAAAAATTGAGCCAAGAAGTTTCCAAGATGGGagagg
aaaacaaaaaaatggctgaaaacaatcaaaatttgtcaaatgaGATCAAT
CGATTGaaagctgaaattgatagaatgGCAGcagaaaatgccaaatttgc
tgaaaacaatgaaaatcttAAGAAAGAGGTTGACCGCATCACTGGTGAAA
ACGAGAAATTTGCAGAAAACAACAAAGTCTTGCAAGAACAAAACACGGTC
TTTACTGAGAACAATGCTAAGCTCAGCACCAGTTTGAAGGAGTTGGAGGA
GCAAGCCAGCCgcttcaaagaaatttatcaaaaattgttgaaagAAAATG
AGAAATTGGCCAGAATCAGAGATGGTCTACAAGAACAGCTTGACGGTTTC
TCGAAATTACAAGAGATGATTTTCAAACAATTGAATGAAAAGATGCGAGC
AATGGATCGTTCATTGTTGGAAAAAGTTGCTGCTGATATTGAAATGCTGG
ATCAAGATCAAGGTCTATCGCCAGAAGAATGGGGCAAATTCATGAAACGT
GTTCCAACACATTTGAAAGAGAAATTCGAAggtatcaaaaatgatttttc
aaaattcgacGAAAATAAAGACAATGTGATTGATTCAGATGAATTCGGCA
AAATGTTGGATGTGGTCATGAAGGAGACAGAACCGGTCTCATCTGGTGAT
GAACAACGATAAATATACAACTTGAACCATAGTCCGTATACCAAACCCCT
GCCTGGAAGCTTTTTGTCCTTTCTATTTCCGGTGAAAATGGGTGTATTTA
GGCAAAAATACTAGGTGCTGACGACTGAcgttatttttcgaaaatcgtgt
cTGTAAAAAGTTACTTCTAAGGGTCCAGACTACACATACCCGACATTCTC
AAgttgaaacaataaatttctaGACCAGGGATTTTATACAGACTATGTTT
GAACTTCATGTTTTTGTTGTGAATACATGTGAACTTAATCAATCTTCATC
TTTGTGGAAACATATGTATAAAATAGTATTTTTATCTATCTATTGTGCTT
TTTGTACACGGTACATAATGACAATAGTAAAATCATATTTGTCTATTACA
ATGTATcgataatttttctttaattaaaaaaatacttttgtttaaatctt
taaaaataattatattaggaatttcttttgaaataatatgatgtaaaaat
tttgaattgaaaatagATAAATTCACCATTCGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00072776-protein

>TCONS_00072776-protein ID=TCONS_00072776-protein|Name=TCONS_00072776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MSAENDRFSANNKKLEEENKKFEENNNRLEASVNKLEGENKKFEENNNRL
ESSVNKLEGENQKFEENNKKLEEENNKFQENNAKLEAEVNRLGTEVNRMT
EENNKFAENNKKLDENVGRLEGEVDKMGQLNKEFEENNNQLKENVNKLEG
EVNKMTEENNKFAENNKALETQVNGLKDEVNKMSEENNKFSANNEKLSQE
VSKMGEENKKMAENNQNLSNEINRLKAEIDRMAAENAKFAENNENLKKEV
DRITGENEKFAENNKVLQEQNTVFTENNAKLSTSLKELEEQASRFKEIYQ
KLLKENEKLARIRDGLQEQLDGFSKLQEMIFKQLNEKMRAMDRSLLEKVA
ADIEMLDQDQGLSPEEWGKFMKRVPTHLKEKFEGIKNDFSKFDENKDNVI
DSDEFGKMLDVVMKETEPVSSGDEQR
Run BLAST on NCBI

transcript from alignment at scaffold_84:3533..11790-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072776 ID=TCONS_00072776|Name=TCONS_00072776|organism=Clytia hemisphaerica|type=transcript|length=8258bp|location=Sequence derived from alignment at scaffold_84:3533..11790- (Clytia hemisphaerica)
TTTTTTAGAGCTTCCAAAATAAAACGAGTTATGTTGTCTTACAATGCCAG CGCCAACATTGCTTAGTTTAGTAAAAGGACCTCCACAACAACAACGAGCA ACAGAAGATACAACAATCCAGCAACAAGATACAACAGACAACAGACAAAC ATTAGCTGCAGCACCAGAACAAATAGCTCCTCACACTGAACAAGNCAGAA GATACAACAATCCAGCAACAAGATACAACAGACAACAGACAAACATTAGC TGCAGCACCAGAACAAATAGTTCCTCACGCTGAACAAGCAGTTGCATCTA CAGTAAGTTTTTCTTAGTCACTCTTTGAACCAACAAGCACACCCCTGTCT CAGTAACTGCCGAAGGGATTTCATTTTCTACAAAAATCCAGTTGAGATTA TAAAGATAACGTCTTTTCAAGTACCTTATCGGCTAAAACTTAGTCGGCCC TAATTGACTAAATTTTGGCTTGATGACTAAAATTAGTGCCGACTAAAATT AAGGCCGACTCAAAATTTGGGCCAAATTAAAAGTTTATAAATAAACTTTC CTTATTTTCCAGTATTTTAAGCTTTCTCCTATTTTCCATCTGCTTGTAAA TTTAGAAATGGCCCAAATTTTTAGTCGGTCTTAATTATTAGTCGGCCCTT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNTTCCTTATTTTCCAGTATTTTAAGCT TTCTCCTATTTTCCATCTGCTTGTAAATTTAGAAATGGCCCAAATTTTTA GTCGGTCTTAATTATTAGTCGGCACTTAGTGACTAAATTTTGACAAGGTG ACTAAAATTAGGGCCGACTAATAATTGAGGCCGACTAACTTTTGGCCGAT AAGGTATAGCGATGAAAGCTCGATGTAGTTTTCTAACAGGATTTGTAGCA CTAAGGGTTGAGGATTTGGGCCTACCCTGTCTCTTCACTTCTAACTTTCA CCACTAGTGCTATAGCCCCAAAGCTTACCAAAGAATTCTACCGAAACTGG AGTCAGGAATCATCCCCCGAATTCAACAGAGATGGAGTTTTTATAAGATA CTTTATAATAATCGGTCATTTGAAGTAATAAAAATGACGCGTTCTTTTGA AACAGTAACAAAATTGGTTTATTACTGGTTAACGCCCGACCAAATAAAAA AAGAGCTTGTAAAAACTCCATCTCGTTTCCCGAATTTAATAGAACCAAAG ACTTAAAGTTTTGATATGCTTTTGCGATCGCAAAGATGTTCACTCAGAAG AGAATTTAGCACTTGACAAAGGAAACCGCAATCATGTTTTATTACAAAAT CACCAAAATCAATCAAAAAGTGCATCATGCCACTAATTATGCACATCTCG CCCATTAAAATGAATCCCTTGACAACAAAAACAATTCCAAAAGCCTTGCA TATGAAACGAAAATATCAACAGATAATTCAGTGACTGTTTTAAGAGATCG TACAAGAAAACTATAAACGTAAGTGGGCGAAGTGAATTGTGTATGAAAAT CAATATTGAAAGTTTGACGCAGATTTTGTGGTGATTTGTGGTAGTTTTAA ACTGGAAAACCGTGAAAAAGACGTTTTGATTTTTTGAGTTGAGTTATATA TCACGTTGTTAAGATGGAAGTGGCTCTCGTTGGATGTCTTTATAAAGGGT TAGGTCGTTCTGGTGGTAAGATACAACACACAATTTCACCAACAAAAACA ATGGCACACGAGGATGAAATTTTAACAGAGGAAATTATAAGTGTTGAACA TTCAAATGATTCTTTTAACAGAGGATCACCTGTGAAATTGAATAAGAGGC AAATTGTTGAAGAAGATTTAGTTGAGACTTTGGATGATAATGTTTTGAAT TGCGAATGTCCACCTGTTCCTGATTGGAGCCCAGATGGGGAGAAAGTATG GTGCTTGTTTCATTTCAGATGTCAGATGGAAGATTGAGAAATATTAAGAA ATTTAAGGAAAATAACTTTCACTTTCGAATCGAGTGATTGTTTTCTTTCT GTCAAACAAGGGTGACACATTTTAAGCCATGAGACCAGCTACTCCCATTC CGTAACTTCGTGTAATGCCGACATACCTTGTCTAATTCCGTCATAGCAAC TATCTGGTCTTGAAAATGTTTATAGATAAACCTTCTGAATTTAAGCTGTT TAAAATACCACTCTAATTACTTGTAACTACTTTACAGACCAGATAGTTAC TATGCCGGAATTAGACAAGGCATGTCGACATTACACGAAGCTACAGTACG TGTCAGAGTCAGAACAGTGTTTAAATTTTAAACCAATAACTAGTCGCAGC TAGTTTCCCGGCGAAATTGCTTCAAAAGTTCCACCAGACATGTCCATTTC CAGTAAAATCAAAAAGCGTTAGGTTTGCTCTAGATAGGGTCTGGATTGAA TTTTATACGCTTTTTAATTCCAATCTTGTTACATTTCTTTCAGCCTCAGT CCACATATAACAATAACTCACCACCTCCAAAAGACATCACAAAGACTTCA AAAATGGGCGGCGGAAAATTAAACGTCAAAATTGTTAATGGAAGGGGACT TCAGAATAAAGATACGTTTAGCAAGAGCGATCCTTACTGTATGGTTGAAT TAGGTAAGATATTAGGTTATACATCTAACAGATAGCGCTATTTCTTGAAT CATATGAATGTTTTGTACCACACATGATAGTCTAAATTGCAGATATGTAC TTCCAAAATATAAAAACTCTTCAGAGGATGAGTAAAAACCTACACACATG GTGTTGTATTTTAATTGCTTGAATCAAAGACCCAGCGTCAAATTATTTTA TCGGAGTATTATCGCGTCAAGGGTTAAAGTGGACACCTAGAAGAGCTAAA ATCTTAAGCTAATTTGGGGATTGGACTAGTTATTAAATAACACTCTTCTC GTCTTCGCCACTTTTGGTTGACAGTACAATGGAATCTCCATAACTCGAAA CTCGAATGTCTCCTTAACTTATAACATATACATAACACAAATTTTCATCA CTCGAAAAAATTTGTGTTCCCATGGGATTTCGAGCTAGAGAGACTGTAGT GATACTTTGAAACTACGGTCCGAAAAGATGGCGGGGGAGGTAAGGAAGAA TATGGGAGAGATTCTGCTTGTCATACCTATTTCAACTTATTTTCCACTAC AGGCAACAAATCGTTCAGTACGAAACATATGAGTGACAATTTGGATCCTG ATTGGAACGAACAGTTCAGTTTTGACGTAACCGAAGGACAAGATGTTTTA GCATTATCTGTCTGGGATAAAAACAAGATCTCCAAAGATGTTTTTATGGG ATACAGTTTTGTTTCTTTTGATAACTGCAAGAAGGACCAACCCACAACTA AGGTAAGTCTAAGTCAAAGACGTCCCCAAACACCAGCAAAGAAAAAAAAA CTCCGAGAAAAACTCCGAGAGAAACTCCGAGAAAAACTCCTGAAGAATCC TGGAGAAACATAATGATAAGATCCCTACTTCAAATACCAATTGAGGAATT CCTTAGCTTTAGTGACTACAAAAAGTTAAATCACGCTAAATGCCACTGCA GGCATATTGAACACGATTGCAAAGAATTGACTGAAACTCAGCTGAGTTAA CCCAACCGGAGAAGGCCCATAACTAATACACTCTTAAAAACTCAAATAAT TGTCTTTCGACAACTTTAAAAGTTTAAGCTATTTCAATATCATGGATACC GGAGACGGGGCCATGGGTTTATCAAATCCGAGACTTCTTAACGAACAAAC GAATGACACAATTAATCGAAACGTATATACTAGAATCCTCATTTTCTTTA TCTTAGAGTGCACAAATGATGGGTGGTTGCAAAGGAACAATCAATCTTAT CATCACAGCATCATTCGAGACAAGTGCAAGTGCTATTGATCGATTAGGTG GACAACTTCAACAAACAGCAGCTGATGCTGATAAATACAAGTGTGATTCT GAACGCCTTGGAGCTGAAGTAAACCGTATGTCAGCCGAAAATGACNACTT CAACAAACAGCAGCTGATGCTGATAAATACAAGTGTGATTCTGAACGTCT TGGAGCTGAAGTAAACCTTATGTCAGCCGAAAATGACCGATTCTCTGCCA ATAACAAAAAACTCGAGGAAGAAAATAAGAAATTTGAGGAAAACAATAAC CGTTTAGAAGCATCTGTCAATAAATTGGAAGGAGAGAATAAGAAGTTTGA AGAAAATAACAACCGCCTTGAATCCTCTGTCAACAAATTAGAAGGCGAAA ATCAAAAGTTTGAAGAAAACAATAAGAAGCTTGAAGAAGAAAACAATAAA TTTCAGGAAAACAATGCCAAATTAGAAGCTGAAGTGAACCGCCTTGGAAC TGAAGTAAACCGAATGACAGAGGAGAATAACAAATTTGCTGAAAACAACA AGAAACTTGATGAAAATGTCGGACGTCTGGAAGGAGAAGTTGATAAAATG GGGCAACTCAACAAAGAGTTTGAAGAAAACAATAATCAATTGAAAGAAAA TGTCAACAAACTTGAAGGAGAAGTCAACAAGATGACTGAAGAAAACAACA AATTCGCTGAAAACAACAAAGCTCTCGAAACACAAGTTAATGGACTTAAG GTGAGCTCTGATTTTCGATTTTAAACGCTACAAGCATTTGAGAGACTCCA GCAGAGCTATTTGAGAGTAAGGTGCTGGCCTAAAGCCCCCTCCCTCCTAA AGCCTACGAGCTGGATCCACCAAGGTTCTTATGAAGCTCAAAACAAAGTT AAGGGATAAGGATGCAAGATTAGGATGATCTTAAAGAGGACTTTTTTTCT TATGCTAAATGTAAGCAAATTCTATTGATAAGAGAATACACCCCCTTCTC ACAGACCCGATAGGATTTTTTCAGCAAGTGGGGGTAAACGGACTGAAACT CGATGGGGATTGATATTCCCATATCATTTATGTCTGGGGATTTGAATTCC ATTGTTTTCGTATTAGAAAATTCAGTGGGTCTGTGAGAAGGGGGTGTGAG GATAAAGCGAAGGCCCCGTATGAACAATACCACGTTCAATAACTTTGATC AAAATCTAAATCACACTTAAATTCCAGGATGAGGTTAACAAGATGAGTGA AGAGAACAATAAATTTTCTGCAAACAACGAAAAATTGAGCCAAGAAGTTT CCAAGATGGGAGAGGAAAACAAAAAAATGGCTGAAAACAATCAAAATTTG TCAAATGAGATCAATCGATTGAAAGCTGAAATTGATAGAATGGCAGCAGA AAATGCCAAATTTGCTGAAAACAATGAAAATCTTAAGAAAGAGGTGATAC TCATAAAAAGGGGATCTCCATTTGAAAAGAATATAGTTTCGGATAATCAA CCGTTGACCAGAGAATTTTTTCGTAATTACTTGCAATGCATCTTTTTTTC TCTAAATCTCGAATTAAATTAGCTTACAAACCCAAAATTCTTAAGAATCC AAATCCCTTCTAGGCTAACAGTTTCTCAACTTTTTGTCAAAGGTTGACCG CATCACTGGTGAAAACGAGAAATTTGCAGAAAACAACAAAGTCTTGCAAG AACAAAACACGGTCTTTACTGAGAACAATGCTAAGCTCAGCACCAGTTTG AAGGAGTTGGAGGAGCAAGCCAGCCGCTTCAAAGAAATTTATCAAAAATT GTTGAAAGAAAATGAGAAATTGGCCAGAATCAGAGATGGTCTACAAGAAC AGCTTGACGTAAGTAACAAAAGGCATTATCAAACTACTGTATTCCCAGCT GGCAGACAACGTTGTTTCAACGTCCATCCAACGTTATATGAAGTATTAAC GTTAGAGACGCTAGAGGACGTTGTTTCAACGTTCTTCTAACGTTACATGA AGTTAGAGACGCTAGGTGACGTTGTTTTGACGTTCTGCGCTCCATATAAA GAACATCCCGCTGTCCGCACCTTCCTCGGCGCCCCATTGGAATTTTTTCC CCCAGCTGGGACCAAAATTTCTATCGAAATCCCAAAGGGTATTGAAAATC ACTTGTTTTCAACTCAAATATCCAGTTGGAGTCGTTAAGAGTGCATTTTT CATCGTGGAGAGAAGAATTTGGCCAAATTCGCCATTGGTGGGGTCATTCC TGTTTGGTGTCAATTTTTTTCCTTTTCCTTTTTGCCTTGAATATTATGTA TATTTTCACTTTTTTGGAATCTCAGAATATCCGTTTTTTAAGTTAACGCG TTATTCTTTTTCTTTTTCCTTTCCAGGGTTTCTCGAAATTACAAGAGATG ATTTTCAAACAATTGAATGAAAAGATGCGAGCAATGGATCGTTCATTGTT GGAAAAAGTTGCTGCTGATATTGAAATGCTGGATCAAGATCAAGGTAACA GAAAAGCATAAGCGTAGAAGATTTTTGGCAAGCACAAAACAGCAATCAAA TTCTCATTTAAATTTCATCAAAAGTTATTGTTTTTGTCTCAACTGCAGGT TCTGTTGAGCCGGAACTTAGTCAATATCTTTTTCATACGGAGGGTCATTG CTTATAGCCTGGTTCTTAGGTAATCAAAGTTGATCGATTTGTAAATACAG TAAATTCACTCACTAATTAAAATCTCTATTATTCGACTTTTACTGTGATT CGAACTAAAATACTGGTTCTCTCTGCTGGAAAATGGCTCAAAATATATGT GACGTATATGACAATCGTTCTGTTTGGCTCTTTTTTCCGGACACATTTTC GGACACTTAATCAATAAAAAAACAATTTTGAAATAGTTTCAAATTCTATG AAAGTATAATTTCAAAATCATTTTCAATTCACAGGTCTATCGCCAGAAGA ATGGGGCAAATTCATGAAACGTGTTCCAACACATTTGAAAGAGAAATTCG AAGGTATCAAAAATGATTTTTCAAAATTCGACGAAAATAAAGACAATGTG ATTGATTCAGATGAATTCGGCAAAATGTTGGATGTGGTCATGAAGGAGAC AGAACCGGTCTCATCTGGTGATGAACAACGATAAATATACAACTTGAACC ATAGTCCGTATACCAAACCCCTGCCTGGAAGCTTTTTGTCCTTTCTATTT CCGGTGAAAATGGGTGTATTTAGGCAAAAATACTAGGTGCTGACGACTGA CGTTATTTTTCGAAAATCGTGTCTGTAAAAAGTTACTTCTAAGGGTCCAG ACTACACATACCCGACATTCTCAAGTTGAAACAATAAATTTCTAGACCAG GGATTTTATACAGACTATGTTTGAACTTCATGTTTTTGTTGTGAATACAT GTGAACTTAATCAATCTTCATCTTTGTGGAAACATATGTATAAAATAGTA TTTTTATCTATCTATTGTGCTTTTTGTACACGGTACATAATGACAATAGT AAAATCATATTTGTCTATTACAATGTATCGATAATTTTTCTTTAATTAAA AAAATACTTTTGTTTAAATCTTTAAAAATAATTATATTAGGAATTTCTTT TGAAATAATATGATGTAAAAATTTTGAATTGAAAATAGATAAATTCACCA TTCGAAAT

Coding sequence (CDS) from alignment at scaffold_84:3533..11790-

>TCONS_00072776 ID=TCONS_00072776|Name=TCONS_00072776|organism=Clytia hemisphaerica|type=CDS|length=6405bp|location=Sequence derived from alignment at scaffold_84:3533..11790- (Clytia hemisphaerica)
GTCTATCGCCAGAAGAATGGGGCAAATTCATGAAACGTGTTCCAACACAT
TTGAAAGAGAAATTCGAAGGTATCAAAAATGATTTTTCAAAATTCGACGA
AAATAAAGACAATGTGATTGATTCAGATGAATTCGGCAAAATGTTGGATG
TGGTCATGAAGGAGACAGAACCGGTCTCATCTGGTGATGAACAACGATAA
GGTTTCTCGAAATTACAAGAGATGATTTTCAAACAATTGAATGAAAAGAT
GCGAGCAATGGATCGTTCATTGTTGGAAAAAGTTGCTGCTGATATTGAAA
TGCTGGATCAAGATCAAGGTTGACCGCATCACTGGTGAAAACGAGAAATT
TGCAGAAAACAACAAAGTCTTGCAAGAACAAAACACGGTCTTTACTGAGA
ACAATGCTAAGCTCAGCACCAGTTTGAAGGAGTTGGAGGAGCAAGCCAGC
CGCTTCAAAGAAATTTATCAAAAATTGTTGAAAGAAAATGAGAAATTGGC
CAGAATCAGAGATGGTCTACAAGAACAGCTTGACGATGAGGTTAACAAGA
TGAGTGAAGAGAACAATAAATTTTCTGCAAACAACGAAAAATTGAGCCAA
GAAGTTTCCAAGATGGGAGAGGAAAACAAAAAAATGGCTGAAAACAATCA
AAATTTGTCAAATGAGATCAATCGATTGAAAGCTGAAATTGATAGAATGG
CAGCAGAAAATGCCAAATTTGCTGAAAACAATGAAAATCTTAAGAAAGAG
ATGTCAGCCGAAAATGACCGATTCTCTGCCAATAACAAAAAACTCGAGGA
AGAAAATAAGAAATTTGAGGAAAACAATAACCGTTTAGAAGCATCTGTCA
ATAAATTGGAAGGAGAGAATAAGAAGTTTGAAGAAAATAACAACCGCCTT
GAATCCTCTGTCAACAAATTAGAAGGCGAAAATCAAAAGTTTGAAGAAAA
CAATAAGAAGCTTGAAGAAGAAAACAATAAATTTCAGGAAAACAATGCCA
AATTAGAAGCTGAAGTGAACCGCCTTGGAACTGAAGTAAACCGAATGACA
GAGGAGAATAACAAATTTGCTGAAAACAACAAGAAACTTGATGAAAATGT
CGGACGTCTGGAAGGAGAAGTTGATAAAATGGGGCAACTCAACAAAGAGT
TTGAAGAAAACAATAATCAATTGAAAGAAAATGTCAACAAACTTGAAGGA
GAAGTCAACAAGATGACTGAAGAAAACAACAAATTCGCTGAAAACAACAA
AGCTCTCGAAACACAAGTTAATGGACTTAAGGTCTATCGCCAGAAGAATG
GGGCAAATTCATGAAACGTGTTCCAACACATTTGAAAGAGAAATTCGAAG
GTATCAAAAATGATTTTTCAAAATTCGACGAAAATAAAGACAATGTGATT
GATTCAGATGAATTCGGCAAAATGTTGGATGTGGTCATGAAGGAGACAGA
ACCGGTCTCATCTGGTGATGAACAACGATAAGGTTTCTCGAAATTACAAG
AGATGATTTTCAAACAATTGAATGAAAAGATGCGAGCAATGGATCGTTCA
TTGTTGGAAAAAGTTGCTGCTGATATTGAAATGCTGGATCAAGATCAAGG
TTGACCGCATCACTGGTGAAAACGAGAAATTTGCAGAAAACAACAAAGTC
TTGCAAGAACAAAACACGGTCTTTACTGAGAACAATGCTAAGCTCAGCAC
CAGTTTGAAGGAGTTGGAGGAGCAAGCCAGCCGCTTCAAAGAAATTTATC
AAAAATTGTTGAAAGAAAATGAGAAATTGGCCAGAATCAGAGATGGTCTA
CAAGAACAGCTTGACGATGAGGTTAACAAGATGAGTGAAGAGAACAATAA
ATTTTCTGCAAACAACGAAAAATTGAGCCAAGAAGTTTCCAAGATGGGAG
AGGAAAACAAAAAAATGGCTGAAAACAATCAAAATTTGTCAAATGAGATC
AATCGATTGAAAGCTGAAATTGATAGAATGGCAGCAGAAAATGCCAAATT
TGCTGAAAACAATGAAAATCTTAAGAAAGAGATGTCAGCCGAAAATGACC
GATTCTCTGCCAATAACAAAAAACTCGAGGAAGAAAATAAGAAATTTGAG
GAAAACAATAACCGTTTAGAAGCATCTGTCAATAAATTGGAAGGAGAGAA
TAAGAAGTTTGAAGAAAATAACAACCGCCTTGAATCCTCTGTCAACAAAT
TAGAAGGCGAAAATCAAAAGTTTGAAGAAAACAATAAGAAGCTTGAAGAA
GAAAACAATAAATTTCAGGAAAACAATGCCAAATTAGAAGCTGAAGTGAA
CCGCCTTGGAACTGAAGTAAACCGAATGACAGAGGAGAATAACAAATTTG
CTGAAAACAACAAGAAACTTGATGAAAATGTCGGACGTCTGGAAGGAGAA
GTTGATAAAATGGGGCAACTCAACAAAGAGTTTGAAGAAAACAATAATCA
ATTGAAAGAAAATGTCAACAAACTTGAAGGAGAAGTCAACAAGATGACTG
AAGAAAACAACAAATTCGCTGAAAACAACAAAGCTCTCGAAACACAAGTT
AATGGACTTAAGGTCTATCGCCAGAAGAATGGGGCAAATTCATGAAACGT
GTTCCAACACATTTGAAAGAGAAATTCGAAGGTATCAAAAATGATTTTTC
AAAATTCGACGAAAATAAAGACAATGTGATTGATTCAGATGAATTCGGCA
AAATGTTGGATGTGGTCATGAAGGAGACAGAACCGGTCTCATCTGGTGAT
GAACAACGATAAGGTTTCTCGAAATTACAAGAGATGATTTTCAAACAATT
GAATGAAAAGATGCGAGCAATGGATCGTTCATTGTTGGAAAAAGTTGCTG
CTGATATTGAAATGCTGGATCAAGATCAAGGTTGACCGCATCACTGGTGA
AAACGAGAAATTTGCAGAAAACAACAAAGTCTTGCAAGAACAAAACACGG
TCTTTACTGAGAACAATGCTAAGCTCAGCACCAGTTTGAAGGAGTTGGAG
GAGCAAGCCAGCCGCTTCAAAGAAATTTATCAAAAATTGTTGAAAGAAAA
TGAGAAATTGGCCAGAATCAGAGATGGTCTACAAGAACAGCTTGACGATG
AGGTTAACAAGATGAGTGAAGAGAACAATAAATTTTCTGCAAACAACGAA
AAATTGAGCCAAGAAGTTTCCAAGATGGGAGAGGAAAACAAAAAAATGGC
TGAAAACAATCAAAATTTGTCAAATGAGATCAATCGATTGAAAGCTGAAA
TTGATAGAATGGCAGCAGAAAATGCCAAATTTGCTGAAAACAATGAAAAT
CTTAAGAAAGAGATGTCAGCCGAAAATGACCGATTCTCTGCCAATAACAA
AAAACTCGAGGAAGAAAATAAGAAATTTGAGGAAAACAATAACCGTTTAG
AAGCATCTGTCAATAAATTGGAAGGAGAGAATAAGAAGTTTGAAGAAAAT
AACAACCGCCTTGAATCCTCTGTCAACAAATTAGAAGGCGAAAATCAAAA
GTTTGAAGAAAACAATAAGAAGCTTGAAGAAGAAAACAATAAATTTCAGG
AAAACAATGCCAAATTAGAAGCTGAAGTGAACCGCCTTGGAACTGAAGTA
AACCGAATGACAGAGGAGAATAACAAATTTGCTGAAAACAACAAGAAACT
TGATGAAAATGTCGGACGTCTGGAAGGAGAAGTTGATAAAATGGGGCAAC
TCAACAAAGAGTTTGAAGAAAACAATAATCAATTGAAAGAAAATGTCAAC
AAACTTGAAGGAGAAGTCAACAAGATGACTGAAGAAAACAACAAATTCGC
TGAAAACAACAAAGCTCTCGAAACACAAGTTAATGGACTTAAGGTCTATC
GCCAGAAGAATGGGGCAAATTCATGAAACGTGTTCCAACACATTTGAAAG
AGAAATTCGAAGGTATCAAAAATGATTTTTCAAAATTCGACGAAAATAAA
GACAATGTGATTGATTCAGATGAATTCGGCAAAATGTTGGATGTGGTCAT
GAAGGAGACAGAACCGGTCTCATCTGGTGATGAACAACGATAAGGTTTCT
CGAAATTACAAGAGATGATTTTCAAACAATTGAATGAAAAGATGCGAGCA
ATGGATCGTTCATTGTTGGAAAAAGTTGCTGCTGATATTGAAATGCTGGA
TCAAGATCAAGGTTGACCGCATCACTGGTGAAAACGAGAAATTTGCAGAA
AACAACAAAGTCTTGCAAGAACAAAACACGGTCTTTACTGAGAACAATGC
TAAGCTCAGCACCAGTTTGAAGGAGTTGGAGGAGCAAGCCAGCCGCTTCA
AAGAAATTTATCAAAAATTGTTGAAAGAAAATGAGAAATTGGCCAGAATC
AGAGATGGTCTACAAGAACAGCTTGACGATGAGGTTAACAAGATGAGTGA
AGAGAACAATAAATTTTCTGCAAACAACGAAAAATTGAGCCAAGAAGTTT
CCAAGATGGGAGAGGAAAACAAAAAAATGGCTGAAAACAATCAAAATTTG
TCAAATGAGATCAATCGATTGAAAGCTGAAATTGATAGAATGGCAGCAGA
AAATGCCAAATTTGCTGAAAACAATGAAAATCTTAAGAAAGAGATGTCAG
CCGAAAATGACCGATTCTCTGCCAATAACAAAAAACTCGAGGAAGAAAAT
AAGAAATTTGAGGAAAACAATAACCGTTTAGAAGCATCTGTCAATAAATT
GGAAGGAGAGAATAAGAAGTTTGAAGAAAATAACAACCGCCTTGAATCCT
CTGTCAACAAATTAGAAGGCGAAAATCAAAAGTTTGAAGAAAACAATAAG
AAGCTTGAAGAAGAAAACAATAAATTTCAGGAAAACAATGCCAAATTAGA
AGCTGAAGTGAACCGCCTTGGAACTGAAGTAAACCGAATGACAGAGGAGA
ATAACAAATTTGCTGAAAACAACAAGAAACTTGATGAAAATGTCGGACGT
CTGGAAGGAGAAGTTGATAAAATGGGGCAACTCAACAAAGAGTTTGAAGA
AAACAATAATCAATTGAAAGAAAATGTCAACAAACTTGAAGGAGAAGTCA
ACAAGATGACTGAAGAAAACAACAAATTCGCTGAAAACAACAAAGCTCTC
GAAACACAAGTTAATGGACTTAAGGTCTATCGCCAGAAGAATGGGGCAAA
TTCATGAAACGTGTTCCAACACATTTGAAAGAGAAATTCGAAGGTATCAA
AAATGATTTTTCAAAATTCGACGAAAATAAAGACAATGTGATTGATTCAG
ATGAATTCGGCAAAATGTTGGATGTGGTCATGAAGGAGACAGAACCGGTC
TCATCTGGTGATGAACAACGATAAGGTTTCTCGAAATTACAAGAGATGAT
TTTCAAACAATTGAATGAAAAGATGCGAGCAATGGATCGTTCATTGTTGG
AAAAAGTTGCTGCTGATATTGAAATGCTGGATCAAGATCAAGGTTGACCG
CATCACTGGTGAAAACGAGAAATTTGCAGAAAACAACAAAGTCTTGCAAG
AACAAAACACGGTCTTTACTGAGAACAATGCTAAGCTCAGCACCAGTTTG
AAGGAGTTGGAGGAGCAAGCCAGCCGCTTCAAAGAAATTTATCAAAAATT
GTTGAAAGAAAATGAGAAATTGGCCAGAATCAGAGATGGTCTACAAGAAC
AGCTTGACGATGAGGTTAACAAGATGAGTGAAGAGAACAATAAATTTTCT
GCAAACAACGAAAAATTGAGCCAAGAAGTTTCCAAGATGGGAGAGGAAAA
CAAAAAAATGGCTGAAAACAATCAAAATTTGTCAAATGAGATCAATCGAT
TGAAAGCTGAAATTGATAGAATGGCAGCAGAAAATGCCAAATTTGCTGAA
AACAATGAAAATCTTAAGAAAGAGATGTCAGCCGAAAATGACCGATTCTC
TGCCAATAACAAAAAACTCGAGGAAGAAAATAAGAAATTTGAGGAAAACA
ATAACCGTTTAGAAGCATCTGTCAATAAATTGGAAGGAGAGAATAAGAAG
TTTGAAGAAAATAACAACCGCCTTGAATCCTCTGTCAACAAATTAGAAGG
CGAAAATCAAAAGTTTGAAGAAAACAATAAGAAGCTTGAAGAAGAAAACA
ATAAATTTCAGGAAAACAATGCCAAATTAGAAGCTGAAGTGAACCGCCTT
GGAACTGAAGTAAACCGAATGACAGAGGAGAATAACAAATTTGCTGAAAA
CAACAAGAAACTTGATGAAAATGTCGGACGTCTGGAAGGAGAAGTTGATA
AAATGGGGCAACTCAACAAAGAGTTTGAAGAAAACAATAATCAATTGAAA
GAAAATGTCAACAAACTTGAAGGAGAAGTCAACAAGATGACTGAAGAAAA
CAACAAATTCGCTGAAAACAACAAAGCTCTCGAAACACAAGTTAATGGAC
TTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045178XLOC_045178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072776-exon-scaffold_84-1575043694:11641..11790TCONS_00072776-exon-scaffold_84-1575043694:11641..11790Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:11489..11546TCONS_00072776-exon-scaffold_84-1575043694:11489..11546Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:8438..8597TCONS_00072776-exon-scaffold_84-1575043694:8438..8597Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:7689..7888TCONS_00072776-exon-scaffold_84-1575043694:7689..7888Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:6441..7234TCONS_00072776-exon-scaffold_84-1575043694:6441..7234Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:5748..5963TCONS_00072776-exon-scaffold_84-1575043694:5748..5963Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:5333..5548TCONS_00072776-exon-scaffold_84-1575043694:5333..5548Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:4697..4814TCONS_00072776-exon-scaffold_84-1575043694:4697..4814Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1575043694:3533..4256TCONS_00072776-exon-scaffold_84-1575043694:3533..4256Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:11641..11790TCONS_00072776-exon-scaffold_84-1510915933:11641..11790Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:11489..11546TCONS_00072776-exon-scaffold_84-1510915933:11489..11546Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:8438..8597TCONS_00072776-exon-scaffold_84-1510915933:8438..8597Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:7689..7888TCONS_00072776-exon-scaffold_84-1510915933:7689..7888Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:6441..7234TCONS_00072776-exon-scaffold_84-1510915933:6441..7234Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:5748..5963TCONS_00072776-exon-scaffold_84-1510915933:5748..5963Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:5333..5548TCONS_00072776-exon-scaffold_84-1510915933:5333..5548Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:4697..4814TCONS_00072776-exon-scaffold_84-1510915933:4697..4814Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1510915933:3533..4256TCONS_00072776-exon-scaffold_84-1510915933:3533..4256Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:11641..11790TCONS_00072776-exon-scaffold_84-1491911889:11641..11790Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:11489..11546TCONS_00072776-exon-scaffold_84-1491911889:11489..11546Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:8438..8597TCONS_00072776-exon-scaffold_84-1491911889:8438..8597Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:7689..7888TCONS_00072776-exon-scaffold_84-1491911889:7689..7888Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:6441..7234TCONS_00072776-exon-scaffold_84-1491911889:6441..7234Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:5748..5963TCONS_00072776-exon-scaffold_84-1491911889:5748..5963Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:5333..5548TCONS_00072776-exon-scaffold_84-1491911889:5333..5548Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:4697..4814TCONS_00072776-exon-scaffold_84-1491911889:4697..4814Clytia hemisphaericaexon
TCONS_00072776-exon-scaffold_84-1491911889:3533..4256TCONS_00072776-exon-scaffold_84-1491911889:3533..4256Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072776-proteinTCONS_00072776-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:3533..11790 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
116.938 108.303 182.409 179.783 4.24059 3.42853 35.8277 38.5948 44.8646 43.5304 53.145 21.1388 40.2284 34.8181 35.2318 41.9696 56.2373 62.6018 50.2976 59.8011 47.281 49.2224 57.7162 53.615 44.5007 51.4557 67.111 52.5179 50.3755 51.4252
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072776 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top