TCONS_00072750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072750
Unique NameTCONS_00072750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5457

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072750 ID=TCONS_00072750|Name=TCONS_00072750|organism=Clytia hemisphaerica|type=transcript|length=5457bp
TGATATTACTATAAAAATGTCATTTGAGAATTCGTACATAATTACTTAAA
ATTAGAGACAAAAGATAATGATAAATACTAATTAATACGggaaacaaaaa
ctgaaaagagaATGCACAAGAGACACTGAACAAAAGAAACGGAGGACGCA
CAAGGGAGACAAGACACTGCAGAACAAAGGAAAACGCTGGCAAAACAAAG
ACGCTGACGAACAAAATGACACTGAAAGAGAAatctaaataaatattttt
gtttattttttaacataatATGATAAAATCTTGATCACTTTACACTCCCC
CAATAAACAAATGCATTTATTTTCGAGCCAGGTCTACATTAATAGCCATT
TCACCAAGCTCGGTTAGCATATCACACTCATCAATACCATGAATAACAAC
TAATGATCGTACAGAACGAAAGGTTTCACGAAATACACTTTCATTCTCAT
TCTTATATCGAACTAACGCTTTTCGTGGCTTATCATCTTTGCCATATTCA
AGCTCCTTGATAATTCCATACGTATACGACTTCGAGAGCACAGAATCATT
TTTCGTAAACAATACTATATCTCCCACATTGATTTGATCGGTTTGAAACC
ACTTTTGTTGCTTCATTAATTTGGGGACGTGCACTAACAACCATATTTCA
AACCATGAATCGAAAATCTCCTCATTCTGTTGGAGGATGCTCGTAGGATT
ATCACAATACACAACTCCATCAGGACAACGATCATTATTTCGTCCCAATA
GTAGCCGATTTGGTGTTATTAAATCGAGACATTCAAGATCACCAACGACA
TCTCCGATAGCGATGGGCAGGTTGTTGATTTGGTTCGACATTGACGATCC
AAGTGTCTCCCATTGAATCATTGAGAGACGATGATTTGATGCGGCTTTTT
CAATAGAAAGGTTGATTTCACGGATTTTGCGTTCCACTTTGCCGTGCATG
CTATGACCCTGTACAGGACATAGCTCAAACTCGACACGATTTTTGGTCAT
CAGTTGTGATTTGATGTCGATGAAATTCAATCTCATCTCCTTGCATGCTT
TTACTAATTGACTTCCCTCGTCACACAGAAGCCTTTTTGGATATCCATGA
TTACACGAGAATCTTGTGAATGCCATTATAAAGGAAGATGTGGAGTAGCT
GTCCATCACTTTGATGCTAGTAGCCGATGTCGAACAACAACAGAATACAA
CCAACCAGATCTTGACCGTTGCACGTTTGTTGTGTGTTGAGTACGAGAGA
TAAGGTCCAGATAAATCGACTTGTGTGAAATAGAAGGCTGGAGCGATGGT
CATGTTGTATTGAGAGATTGGTCCCATTGCAATGTCGACTGTACGTTTTA
ATAGATATCGACAGCGTTGACAGGATCTTCTGATTGTCTTTACGAGTTTT
CGCCCTTCAATAATGTGAGCGATTGTTTCGACGTGACGCAGGGTAGTTTC
TACTCCAGAATGATTTACAGTTGGGTGATTCCAGTGGACATCAAGTGCGA
TTGAATATGCAATTGGCGATTTCCTGTCTAAGACAGGAACACAGAATGAT
GTCGACGATAGATCTTTGATATTACGAGTAAAGTTGCCAACTATTGATAT
GCTATCTTCTGGTAGGATTCGTCCTGCGTATAGTAGGATACCTCCAATCT
CCTTCGTGATAGTTTGATATTTCGATTTATGGACGAATTGTCTGACTTCT
TCCGATCCTCTTTTGAAGTAGTAGTTTTCTGCTACAACAATCTCTTCATT
GGTGAGTATTGGTCGAGCATTCGCTGGTATGTTTCTATCCAGTTTGATAC
CATCAAATATGGTTTTGACGAATTTCAGAACATAGGCGAGGATCCTGACG
GCCTTGGAAAAGCTGTGACGATTTGGGTCCACTAGATATTTGGAGAATTT
ATAGCGTTCTCCCATTTCTGATACGAGAGTTGAGATGTGAACTTCGACGA
GATTCTGTTCCTTTTTGACTTCCATCATGTTCTTTTCGGATATCTTCAAA
TCTTGGACTGATTGTGTTGGAAATGACGACTCTGGTTGATGCATCCATTC
AAGTCCAttgatccaatcagaattctGGTCTACGTCCTTGAAGATTGCTC
CTCTCCTTGTTCCGATGTCAGCAATCATTTGATTCGTTGGGATGTAAAAC
CATTCGTTCTTTGAGGTAAAACGTTGGACTTCAAGTACTCGATTCCTCAC
CCAATGCTTCAAGGGTTTTTGGTCATTACTGATCCAGTGCAATGTTATTT
GGCTGTCAGTGAAATGAATTGAAGACTTGAAATGACTCTTGAATGATCGT
TTTACGATTTCTCCTGTGTGGACATTTGTGACTGCAGCAAAGAGCTCGGC
TCTTGGTAGGGTGAGATTTGCAGGAACAATCTTTGTTCTAGCAAACACGA
GTTGTGATGAGTATTCGTTATTCTTTCGATGAAAACGAGCGTAGATTGCT
GCACAAATGAGGCTTTGACTCGCATCCCCAAAGTTGAGTGTGGTGATGTC
CAAATTTGTAGCATCTTGAGGTACAATAGCACGTTTGAATCGAATATCCT
TGATGTGCCCCATTGTCTCGAAGTGGTCTATCCAGATTGGTCTCAATTCA
TCTGGGATTGTGTCGTCCCAAGATAGTTGACGAGTTGATAGATCATGTAG
GTCGAGCTTCATGCTGGCAACGACTGGTGCAATCTTGCCAGTGAGGTCGA
AGATTTCGGCAACCTTTGAAGCACAATGTCGTTTGGTCAACTTCTCAGGA
ATGATATTTGCAGCTTCCGGTGATTTCTTTCCTCGACGTTTCTTGGAGAA
GTTTAGTTCACCGATATTGATTGACAATTCATCTGATTTTGGGTGCCAGA
TCATTCCTCCAACCATGATTGATACTCCGTCATCGGTCAGACTTTCAGGA
GGATCCGATCCAGAAAACGTGACGCCTTTCAGGTGGAAGTCTCCATGCTT
GATCACAAGTTCTAATTCGTCGGCTCGTTGGTGTGCAAGATTGATGTTCG
ATCATCAATGAATGGCAGCTTGGCTATGATTTGTTTTATGCCAAGGTCGA
GAGTGATTGACGAGTCAATTAAATCTTGCTCAGTCTCCTCCTTGATACTG
ATCTCCTCCCGGTGAGACGAGTTCTTACAATCTTTGCAGGTACGACATTT
GATACATCTGTAAGTGATAGATGAACCTGCATTCTCCATGTCATCAAATT
CTTTGATGCGATTTGTGATGCGAGATGAGAACATTTTTACGTCAGGGTTT
ACTTGGATGCCCATTCTGTACAATTGGTATTGTTGACTGAAGAAACCAAG
GTAAGATGATTGGTTGAAGAAGGTTGAGTGGATCTGCGTGAATATTGAAT
GAGGTCCTCCAATGACCCCACGTGAACCGTCTTGGTTGTTGAATACTGAT
TCATATATAGTTAAACCAGATGGAAGTTGATGGATGAATTTGGGGTAATA
TCTCAGGTACTTGATCCCAAGCATAAAGTGGATGTCTCCTCCAACAGTCT
GTGCTGGTATTGGTAGCTGAGCTGGATCTCTCCCAGTTGATTCAAAATGA
TTGCTGATGTCTTGATATACAGCACCCCGCAACGGATATTGTGGAAATGT
GGTGGTGATTGAGTCAAGAGCTATGCCAGTCAATGATGCAACTTGACCAT
CGTGTTGTGGAATTTTGATGTTGAAGGTACCAAACGTTTGTAGTGATGTC
TGGCCAACTCCTCCGATCTCAGTAACATCTGATGTTATCTGTGATGCGTT
GTTGCCGAGTGATTTGATTGCTGAGCGTTTGATGATAAAATCACTGCAGC
CGCTGTCGTAGAAGATTGTATATGGGATATCATCAATGGTGACAGTTTGA
AGCATGTAAATGCCTCTTTCATCATCAGAAGTCAACTTGCTCTGTGGTTT
TGTGTTTGTCTTGTAACTTTCGTATACGTGGAATGATAAACTGATGtcac
gagcaaaagttggtagATCTGGGGATTTGACGAAGCGTTGTTTGAACTTC
TCGAGGATCTCTATGTTGGATTCGTTGTCTTTATGTTTGTCGCAAACAAG
TACGTGCTTCCTTGTCTGGTACTTCTGATGATACTGGTGTTGGCAAGTGT
AATCACGCTGACAACGCCCCTCCTTGTGTTTGAGTGATCTAGCATCAGCA
CCTGGGAATAAACATTGAAAGCAGTATCCTTTGTCTTTCAATAAAGTGAG
CCTATCTGAAGGGGTAAGCTCGGCAAACTTTTTGCATGAGAAGTATTGGA
TCATCCTGGTGCCTCCAGGGCCTGGTGTTGCCACATGATTATCAGTGCCT
TCTTTGGCGTTGCAGATGTAGCAGACAGGGTCAGAGGGTATGGTATTAAA
TGACGAATTAAAACCATACCTCTGATTCCTGGAATTCTTTGAGTCTTGAT
TGAAGCCAGTTGGGCGTTTGGGTTGTTGCCTGGTCTTAGATTCTGGATCC
TGGCTGCCTTGGTTCATAACGATGGACTTCTGCTGTTGTAGCCTCAATTC
GTCCTCGAGAAATTTCGTAAGCTTGATCCAAGTTTCTTCTGGAGGAATGG
TATCGTTTGCTTGATTAAGCCATCTTGAAAGTCGAGCATCGCCGAGAAGT
CGTAGGATGTCGTGCTTTGCTCCTCCATAGTAAAGATGGTTTTCAATATT
GTGAGCCTTTACGAGCGAAGTCAGCTCCTTGACGAGGTTGATGATTTTGT
GAAGGGCGTTGATGGTTGAATCGACGTCCTTTGAACGATACAGTGGACTC
ATTGATGACAGTTGACTGGTTTTTCCTTGAAGCATTATCATGACATCACC
ATAGGCGAACTTGAGCTTCGACCAAACTTCGTCAATATCATCGATAGCTT
TGACGGCGCTGAGGGCTGGATCTTTGAGATAGTTGTTCTTTAGAAGTTCA
GCCAACAGGTGTTTGGGTGTGGTCCTGAGGTGAATCTTCTCAAATTTGGA
TTTAAAGGTGTAAAAGTCGAGTGAATCGTGATAGCCTGAAAACTTGTCGA
GCTTGATGTTGAGGTTTGATTCAGAGAAAAGTTTCTGTTTATACACTTGA
CGATCCTTGATTTCAGCGTTCAAGTTTGTCGTATATATTGATTTGAGTGT
AATTAGAGCAGTATAGTTGAATCGAAGTGTAGTGATACCTTTCGTGATTG
TTTCGTTTGACGTTTCTTTATTGATGACACTTTCAATTCTCTTTGAGATT
TCATTGAGTTGCGTGAAGTTTGATGGTAGACTGTTCTTCAGCTGGATGAT
TTCTTCATCACTCAGGTCTTTGGGTGTACGAGAAAACTCGGATTTGAGTT
CGGTGAGACAACGCTCTATGTCTGCAACGGTAAACAGGATCGACTCGTCT
GATGATGTTGATGATTTGATTTCAGTAGGATGCTTTGTTTCAGGTTGAGT
AGGGCTGATTTCGCAAACTTTGTGGATGTAATCTCTGATTGCTTGAACAG
CTTGAGC
Run BLAST on NCBI

protein sequence of TCONS_00072750-protein

>TCONS_00072750-protein ID=TCONS_00072750-protein|Name=TCONS_00072750-protein|organism=Clytia hemisphaerica|type=polypeptide|length=849bp
MVGGMIWHPKSDELSINIGELNFSKKRRGKKSPEAANIIPEKLTKRHCAS
KVAEIFDLTGKIAPVVASMKLDLHDLSTRQLSWDDTIPDELRPIWIDHFE
TMGHIKDIRFKRAIVPQDATNLDITTLNFGDASQSLICAAIYARFHRKNN
EYSSQLVFARTKIVPANLTLPRAELFAAVTNVHTGEIVKRSFKSHFKSSI
HFTDSQITLHWISNDQKPLKHWVRNRVLEVQRFTSKNEWFYIPTNQMIAD
IGTRRGAIFKDVDQNSDWINGLEWMHQPESSFPTQSVQDLKISEKNMMEV
KKEQNLVEVHISTLVSEMGERYKFSKYLVDPNRHSFSKAVRILAYVLKFV
KTIFDGIKLDRNIPANARPILTNEEIVVAENYYFKRGSEEVRQFVHKSKY
QTITKEIGGILLYAGRILPEDSISIVGNFTRNIKDLSSTSFCVPVLDRKS
PIAYSIALDVHWNHPTVNHSGVETTLRHVETIAHIIEGRKLVKTIRRSCQ
RCRYLLKRTVDIAMGPISQYNMTIAPAFYFTQVDLSGPYLSYSTHNKRAT
VKIWLVVFCCCSTSATSIKVMDSYSTSSFIMAFTRFSCNHGYPKRLLCDE
GSQLVKACKEMRLNFIDIKSQLMTKNRVEFELCPVQGHSMHGKVERKIRE
INLSIEKAASNHRLSMIQWETLGSSMSNQINNLPIAIGDVVGDLECLDLI
TPNRLLLGRNNDRCPDGVVYCDNPTSILQQNEEIFDSWFEIWLLVHVPKL
MKQQKWFQTDQINVGDIVLFTKNDSVLSKSYTYGIIKELEYGKDDKPRKA
LVRYKNENESVFRETFRSVRSLVVIHGIDECDMLTELGEMAINVDLARK
Run BLAST on NCBI

transcript from alignment at scaffold_82:302302..307758

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072750 ID=TCONS_00072750|Name=TCONS_00072750|organism=Clytia hemisphaerica|type=transcript|length=5457bp|location=Sequence derived from alignment at scaffold_82:302302..307758 (Clytia hemisphaerica)
GCTCAAGCTGTTCAAGCAATCAGAGATTACATCCACAAAGTTTGCGAAAT CAGCCCTACTCAACCTGAAACAAAGCATCCTACTGAAATCAAATCATCAA CATCATCAGACGAGTCGATCCTGTTTACCGTTGCAGACATAGAGCGTTGT CTCACCGAACTCAAATCCGAGTTTTCTCGTACACCCAAAGACCTGAGTGA TGAAGAAATCATCCAGCTGAAGAACAGTCTACCATCAAACTTCACGCAAC TCAATGAAATCTCAAAGAGAATTGAAAGTGTCATCAATAAAGAAACGTCA AACGAAACAATCACGAAAGGTATCACTACACTTCGATTCAACTATACTGC TCTAATTACACTCAAATCAATATATACGACAAACTTGAACGCTGAAATCA AGGATCGTCAAGTGTATAAACAGAAACTTTTCTCTGAATCAAACCTCAAC ATCAAGCTCGACAAGTTTTCAGGCTATCACGATTCACTCGACTTTTACAC CTTTAAATCCAAATTTGAGAAGATTCACCTCAGGACCACACCCAAACACC TGTTGGCTGAACTTCTAAAGAACAACTATCTCAAAGATCCAGCCCTCAGC GCCGTCAAAGCTATCGATGATATTGACGAAGTTTGGTCGAAGCTCAAGTT CGCCTATGGTGATGTCATGATAATGCTTCAAGGAAAAACCAGTCAACTGT CATCAATGAGTCCACTGTATCGTTCAAAGGACGTCGATTCAACCATCAAC GCCCTTCACAAAATCATCAACCTCGTCAAGGAGCTGACTTCGCTCGTAAA GGCTCACAATATTGAAAACCATCTTTACTATGGAGGAGCAAAGCACGACA TCCTACGACTTCTCGGCGATGCTCGACTTTCAAGATGGCTTAATCAAGCA AACGATACCATTCCTCCAGAAGAAACTTGGATCAAGCTTACGAAATTTCT CGAGGACGAATTGAGGCTACAACAGCAGAAGTCCATCGTTATGAACCAAG GCAGCCAGGATCCAGAATCTAAGACCAGGCAACAACCCAAACGCCCAACT GGCTTCAATCAAGACTCAAAGAATTCCAGGAATCAGAGGTATGGTTTTAA TTCGTCATTTAATACCATACCCTCTGACCCTGTCTGCTACATCTGCAACG CCAAAGAAGGCACTGATAATCATGTGGCAACACCAGGCCCTGGAGGCACC AGGATGATCCAATACTTCTCATGCAAAAAGTTTGCCGAGCTTACCCCTTC AGATAGGCTCACTTTATTGAAAGACAAAGGATACTGCTTTCAATGTTTAT TCCCAGGTGCTGATGCTAGATCACTCAAACACAAGGAGGGGCGTTGTCAG CGTGATTACACTTGCCAACACCAGTATCATCAGAAGTACCAGACAAGGAA GCACGTACTTGTTTGCGACAAACATAAAGACAACGAATCCAACATAGAGA TCCTCGAGAAGTTCAAACAACGCTTCGTCAAATCCCCAGATctaccaact tttgctcgtgaCATCAGTTTATCATTCCACGTATACGAAAGTTACAAGAC AAACACAAAACCACAGAGCAAGTTGACTTCTGATGATGAAAGAGGCATTT ACATGCTTCAAACTGTCACCATTGATGATATCCCATATACAATCTTCTAC GACAGCGGCTGCAGTGATTTTATCATCAAACGCTCAGCAATCAAATCACT CGGCAACAACGCATCACAGATAACATCAGATGTTACTGAGATCGGAGGAG TTGGCCAGACATCACTACAAACGTTTGGTACCTTCAACATCAAAATTCCA CAACACGATGGTCAAGTTGCATCATTGACTGGCATAGCTCTTGACTCAAT CACCACCACATTTCCACAATATCCGTTGCGGGGTGCTGTATATCAAGACA TCAGCAATCATTTTGAATCAACTGGGAGAGATCCAGCTCAGCTACCAATA CCAGCACAGACTGTTGGAGGAGACATCCACTTTATGCTTGGGATCAAGTA CCTGAGATATTACCCCAAATTCATCCATCAACTTCCATCTGGTTTAACTA TATATGAATCAGTATTCAACAACCAAGACGGTTCACGTGGGGTCATTGGA GGACCTCATTCAATATTCACGCAGATCCACTCAACCTTCTTCAACCAATC ATCTTACCTTGGTTTCTTCAGTCAACAATACCAATTGTACAGAATGGGCA TCCAAGTAAACCCTGACGTAAAAATGTTCTCATCTCGCATCACAAATCGC ATCAAAGAATTTGATGACATGGAGAATGCAGGTTCATCTATCACTTACAG ATGTATCAAATGTCGTACCTGCAAAGATTGTAAGAACTCGTCTCACCGGG AGGAGATCAGTATCAAGGAGGAGACTGAGCAAGATTTAATTGACTCGTCA ATCACTCTCGACCTTGGCATAAAACAAATCATAGCCAAGCTGCCATTCAT TGATGATCGAACATCAATCTTGCACACCAACGAGCCGACGAATTAGAACT TGTGATCAAGCATGGAGACTTCCACCTGAAAGGCGTCACGTTTTCTGGAT CGGATCCTCCTGAAAGTCTGACCGATGACGGAGTATCAATCATGGTTGGA GGAATGATCTGGCACCCAAAATCAGATGAATTGTCAATCAATATCGGTGA ACTAAACTTCTCCAAGAAACGTCGAGGAAAGAAATCACCGGAAGCTGCAA ATATCATTCCTGAGAAGTTGACCAAACGACATTGTGCTTCAAAGGTTGCC GAAATCTTCGACCTCACTGGCAAGATTGCACCAGTCGTTGCCAGCATGAA GCTCGACCTACATGATCTATCAACTCGTCAACTATCTTGGGACGACACAA TCCCAGATGAATTGAGACCAATCTGGATAGACCACTTCGAGACAATGGGG CACATCAAGGATATTCGATTCAAACGTGCTATTGTACCTCAAGATGCTAC AAATTTGGACATCACCACACTCAACTTTGGGGATGCGAGTCAAAGCCTCA TTTGTGCAGCAATCTACGCTCGTTTTCATCGAAAGAATAACGAATACTCA TCACAACTCGTGTTTGCTAGAACAAAGATTGTTCCTGCAAATCTCACCCT ACCAAGAGCCGAGCTCTTTGCTGCAGTCACAAATGTCCACACAGGAGAAA TCGTAAAACGATCATTCAAGAGTCATTTCAAGTCTTCAATTCATTTCACT GACAGCCAAATAACATTGCACTGGATCAGTAATGACCAAAAACCCTTGAA GCATTGGGTGAGGAATCGAGTACTTGAAGTCCAACGTTTTACCTCAAAGA ACGAATGGTTTTACATCCCAACGAATCAAATGATTGCTGACATCGGAACA AGGAGAGGAGCAATCTTCAAGGACGTAGACCagaattctgattggatcaa TGGACTTGAATGGATGCATCAACCAGAGTCGTCATTTCCAACACAATCAG TCCAAGATTTGAAGATATCCGAAAAGAACATGATGGAAGTCAAAAAGGAA CAGAATCTCGTCGAAGTTCACATCTCAACTCTCGTATCAGAAATGGGAGA ACGCTATAAATTCTCCAAATATCTAGTGGACCCAAATCGTCACAGCTTTT CCAAGGCCGTCAGGATCCTCGCCTATGTTCTGAAATTCGTCAAAACCATA TTTGATGGTATCAAACTGGATAGAAACATACCAGCGAATGCTCGACCAAT ACTCACCAATGAAGAGATTGTTGTAGCAGAAAACTACTACTTCAAAAGAG GATCGGAAGAAGTCAGACAATTCGTCCATAAATCGAAATATCAAACTATC ACGAAGGAGATTGGAGGTATCCTACTATACGCAGGACGAATCCTACCAGA AGATAGCATATCAATAGTTGGCAACTTTACTCGTAATATCAAAGATCTAT CGTCGACATCATTCTGTGTTCCTGTCTTAGACAGGAAATCGCCAATTGCA TATTCAATCGCACTTGATGTCCACTGGAATCACCCAACTGTAAATCATTC TGGAGTAGAAACTACCCTGCGTCACGTCGAAACAATCGCTCACATTATTG AAGGGCGAAAACTCGTAAAGACAATCAGAAGATCCTGTCAACGCTGTCGA TATCTATTAAAACGTACAGTCGACATTGCAATGGGACCAATCTCTCAATA CAACATGACCATCGCTCCAGCCTTCTATTTCACACAAGTCGATTTATCTG GACCTTATCTCTCGTACTCAACACACAACAAACGTGCAACGGTCAAGATC TGGTTGGTTGTATTCTGTTGTTGTTCGACATCGGCTACTAGCATCAAAGT GATGGACAGCTACTCCACATCTTCCTTTATAATGGCATTCACAAGATTCT CGTGTAATCATGGATATCCAAAAAGGCTTCTGTGTGACGAGGGAAGTCAA TTAGTAAAAGCATGCAAGGAGATGAGATTGAATTTCATCGACATCAAATC ACAACTGATGACCAAAAATCGTGTCGAGTTTGAGCTATGTCCTGTACAGG GTCATAGCATGCACGGCAAAGTGGAACGCAAAATCCGTGAAATCAACCTT TCTATTGAAAAAGCCGCATCAAATCATCGTCTCTCAATGATTCAATGGGA GACACTTGGATCGTCAATGTCGAACCAAATCAACAACCTGCCCATCGCTA TCGGAGATGTCGTTGGTGATCTTGAATGTCTCGATTTAATAACACCAAAT CGGCTACTATTGGGACGAAATAATGATCGTTGTCCTGATGGAGTTGTGTA TTGTGATAATCCTACGAGCATCCTCCAACAGAATGAGGAGATTTTCGATT CATGGTTTGAAATATGGTTGTTAGTGCACGTCCCCAAATTAATGAAGCAA CAAAAGTGGTTTCAAACCGATCAAATCAATGTGGGAGATATAGTATTGTT TACGAAAAATGATTCTGTGCTCTCGAAGTCGTATACGTATGGAATTATCA AGGAGCTTGAATATGGCAAAGATGATAAGCCACGAAAAGCGTTAGTTCGA TATAAGAATGAGAATGAAAGTGTATTTCGTGAAACCTTTCGTTCTGTACG ATCATTAGTTGTTATTCATGGTATTGATGAGTGTGATATGCTAACCGAGC TTGGTGAAATGGCTATTAATGTAGACCTGGCTCGAAAATAAATGCATTTG TTTATTGGGGGAGTGTAAAGTGATCAAGATTTTATCATattatgttaaaa aataaacaaaaatatttatttagatTTCTCTTTCAGTGTCATTTTGTTCG TCAGCGTCTTTGTTTTGCCAGCGTTTTCCTTTGTTCTGCAGTGTCTTGTC TCCCTTGTGCGTCCTCCGTTTCTTTTGTTCAGTGTCTCTTGTGCATtctc ttttcagtttttgtttccCGTATTAATTAGTATTTATCATTATCTTTTGT CTCTAATTTTAAGTAATTATGTACGAATTCTCAAATGACATTTTTATAGT AATATCA

Coding sequence (CDS) from alignment at scaffold_82:302302..307758

>TCONS_00072750 ID=TCONS_00072750|Name=TCONS_00072750|organism=Clytia hemisphaerica|type=CDS|length=2550bp|location=Sequence derived from alignment at scaffold_82:302302..307758 (Clytia hemisphaerica)
ATGGTTGGAGGAATGATCTGGCACCCAAAATCAGATGAATTGTCAATCAA
TATCGGTGAACTAAACTTCTCCAAGAAACGTCGAGGAAAGAAATCACCGG
AAGCTGCAAATATCATTCCTGAGAAGTTGACCAAACGACATTGTGCTTCA
AAGGTTGCCGAAATCTTCGACCTCACTGGCAAGATTGCACCAGTCGTTGC
CAGCATGAAGCTCGACCTACATGATCTATCAACTCGTCAACTATCTTGGG
ACGACACAATCCCAGATGAATTGAGACCAATCTGGATAGACCACTTCGAG
ACAATGGGGCACATCAAGGATATTCGATTCAAACGTGCTATTGTACCTCA
AGATGCTACAAATTTGGACATCACCACACTCAACTTTGGGGATGCGAGTC
AAAGCCTCATTTGTGCAGCAATCTACGCTCGTTTTCATCGAAAGAATAAC
GAATACTCATCACAACTCGTGTTTGCTAGAACAAAGATTGTTCCTGCAAA
TCTCACCCTACCAAGAGCCGAGCTCTTTGCTGCAGTCACAAATGTCCACA
CAGGAGAAATCGTAAAACGATCATTCAAGAGTCATTTCAAGTCTTCAATT
CATTTCACTGACAGCCAAATAACATTGCACTGGATCAGTAATGACCAAAA
ACCCTTGAAGCATTGGGTGAGGAATCGAGTACTTGAAGTCCAACGTTTTA
CCTCAAAGAACGAATGGTTTTACATCCCAACGAATCAAATGATTGCTGAC
ATCGGAACAAGGAGAGGAGCAATCTTCAAGGACGTAGACCagaattctga
ttggatcaaTGGACTTGAATGGATGCATCAACCAGAGTCGTCATTTCCAA
CACAATCAGTCCAAGATTTGAAGATATCCGAAAAGAACATGATGGAAGTC
AAAAAGGAACAGAATCTCGTCGAAGTTCACATCTCAACTCTCGTATCAGA
AATGGGAGAACGCTATAAATTCTCCAAATATCTAGTGGACCCAAATCGTC
ACAGCTTTTCCAAGGCCGTCAGGATCCTCGCCTATGTTCTGAAATTCGTC
AAAACCATATTTGATGGTATCAAACTGGATAGAAACATACCAGCGAATGC
TCGACCAATACTCACCAATGAAGAGATTGTTGTAGCAGAAAACTACTACT
TCAAAAGAGGATCGGAAGAAGTCAGACAATTCGTCCATAAATCGAAATAT
CAAACTATCACGAAGGAGATTGGAGGTATCCTACTATACGCAGGACGAAT
CCTACCAGAAGATAGCATATCAATAGTTGGCAACTTTACTCGTAATATCA
AAGATCTATCGTCGACATCATTCTGTGTTCCTGTCTTAGACAGGAAATCG
CCAATTGCATATTCAATCGCACTTGATGTCCACTGGAATCACCCAACTGT
AAATCATTCTGGAGTAGAAACTACCCTGCGTCACGTCGAAACAATCGCTC
ACATTATTGAAGGGCGAAAACTCGTAAAGACAATCAGAAGATCCTGTCAA
CGCTGTCGATATCTATTAAAACGTACAGTCGACATTGCAATGGGACCAAT
CTCTCAATACAACATGACCATCGCTCCAGCCTTCTATTTCACACAAGTCG
ATTTATCTGGACCTTATCTCTCGTACTCAACACACAACAAACGTGCAACG
GTCAAGATCTGGTTGGTTGTATTCTGTTGTTGTTCGACATCGGCTACTAG
CATCAAAGTGATGGACAGCTACTCCACATCTTCCTTTATAATGGCATTCA
CAAGATTCTCGTGTAATCATGGATATCCAAAAAGGCTTCTGTGTGACGAG
GGAAGTCAATTAGTAAAAGCATGCAAGGAGATGAGATTGAATTTCATCGA
CATCAAATCACAACTGATGACCAAAAATCGTGTCGAGTTTGAGCTATGTC
CTGTACAGGGTCATAGCATGCACGGCAAAGTGGAACGCAAAATCCGTGAA
ATCAACCTTTCTATTGAAAAAGCCGCATCAAATCATCGTCTCTCAATGAT
TCAATGGGAGACACTTGGATCGTCAATGTCGAACCAAATCAACAACCTGC
CCATCGCTATCGGAGATGTCGTTGGTGATCTTGAATGTCTCGATTTAATA
ACACCAAATCGGCTACTATTGGGACGAAATAATGATCGTTGTCCTGATGG
AGTTGTGTATTGTGATAATCCTACGAGCATCCTCCAACAGAATGAGGAGA
TTTTCGATTCATGGTTTGAAATATGGTTGTTAGTGCACGTCCCCAAATTA
ATGAAGCAACAAAAGTGGTTTCAAACCGATCAAATCAATGTGGGAGATAT
AGTATTGTTTACGAAAAATGATTCTGTGCTCTCGAAGTCGTATACGTATG
GAATTATCAAGGAGCTTGAATATGGCAAAGATGATAAGCCACGAAAAGCG
TTAGTTCGATATAAGAATGAGAATGAAAGTGTATTTCGTGAAACCTTTCG
TTCTGTACGATCATTAGTTGTTATTCATGGTATTGATGAGTGTGATATGC
TAACCGAGCTTGGTGAAATGGCTATTAATGTAGACCTGGCTCGAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045160XLOC_045160Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072750-proteinTCONS_00072750-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072750-exon-scaffold_82-1491911889:302302..307758TCONS_00072750-exon-scaffold_82-1491911889:302302..307758Clytia hemisphaericaexon
TCONS_00072750-exon-scaffold_82-1510915933:302302..307758TCONS_00072750-exon-scaffold_82-1510915933:302302..307758Clytia hemisphaericaexon
TCONS_00072750-exon-scaffold_82-1575043694:302302..307758TCONS_00072750-exon-scaffold_82-1575043694:302302..307758Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:302302..307758 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0699206 0.0995464 0.0471752 0.0302218 0.0820491 0.0504282 0.0956049 0.113914 0.0341803 0.127014 0.065042 0.063032 0.0764324 0.084045 0.0422256 0.0343905 0.0253744 0.0104032 0.0215589 0.0300797 0.0326809 0.0191287 0 0.0211408 0.23952 0.252632 0.0278089 0.0106738 0.0535858 0.0155111
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR008042Retrotrans_Pao
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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