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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072748 ID=TCONS_00072748|Name=TCONS_00072748|organism=Clytia hemisphaerica|type=transcript|length=1211bp
aatttattcgacaatcgtcattcaacatactctactcccaacaagaatgc
ttaaagatcctgtgttatggtacttcgacagtaagtacaaatattttttt
ctatgttCTTTTATGTTTAAActgtgttcttgttgatacttaccaggcac
tattttggaaattattatcaaagattgaaagaaacttttgtgagctattt
ttgaggaaatttcagtacactcaccatatatcatctaatttcatgtttct
tattttccctttaagctttttatgaatgaggattcattaccttgacaacg
caatattgTCTCGTTACTGCTACTACCACGTTACGTCATCATTTTCCATC
CTTATACACGAtattgtaaacaattttgtccatgagatcGATGAGATCCC
TTTTCATCCCGGTCATCCCGCCGGAGAAAGTcctgaatacacgctttttc
ttttataagaatacactttataaggatgtccatgatgaaaatggtgTCAT
GGTGGATTTATGATCTTCCATTTTATAACTATTGCTATAGTAACCAACAT
TATAGCCATCTTATTCGGAATTTAATTATATGCTTAGTGAATGAATTTGA
AAACACTTCTATGTTTGGACTGGCAGGGTGAAGAGCTTGCGAAGCTTAAC
GATCATTTTGAGGAAGAATGTAGACGTATTGGTTTTGTACGGGAACGAGG
AACGTTGCCCATGAGTCGATTGGAAGATGGCCTTTGTATTGAGCTACGAG
GAAGCTACAGGCATCTCTCGACATCAGTCGATCGATTGTTCAATGATCTC
GATGGCAGAAACATTGTATTTGAATACATTTTCAATCGCTTATCGTTATG
TTCTAATTACTGAAGAAGTCAACAGCGGATTTGTCGCTAACTTCATCTAG
TGTCAGTTTATGCTTGTGCCCTGAATTCTACAATGCCCAAAAGGCTCTCC
CCTTCTTCCAGCTTTGGGTTCCAGATTCGATCCCGAATACAAATTCATTG
TTATTCAAGAGACAATCCCCGTTCTCCCCGTGAcaatggccaaaaaaatt
aagaataatgctaagaatatcagcATCatgaattttgctactcaagctaa
gaatgccaattttagagcattttcgattATAACTTGTCAACTGCCCCAAG
ACGCCAATAGGAAGTTTAACTATTCACCaagcattttaggcaaaatgaaa
aaaaataaaaa Run BLAST on NCBI transcript from alignment at scaffold_82:238903..240113 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072748 ID=TCONS_00072748|Name=TCONS_00072748|organism=Clytia hemisphaerica|type=transcript|length=1211bp|location=Sequence derived from alignment at scaffold_82:238903..240113 (Clytia hemisphaerica)
tttttattttttttcattttgcctaaaatgcttGGTGAATAGTTAAACTT
CCTATTGGCGTCTTGGGGCAGTTGACAAGTTATaatcgaaaatgctctaa
aattggcattcttagcttgagtagcaaaattcatGATgctgatattctta
gcattattcttaatttttttggccattgTCACGGGGAGAACGGGGATTGT
CTCTTGAATAACAATGAATTTGTATTCGGGATCGAATCTGGAACCCAAAG
CTGGAAGAAGGGGAGAGCCTTTTGGGCATTGTAGAATTCAGGGCACAAGC
ATAAACTGACACTAGATGAAGTTAGCGACAAATCCGCTGTTGACTTCTTC
AGTAATTAGAACATAACGATAAGCGATTGAAAATGTATTCAAATACAATG
TTTCTGCCATCGAGATCATTGAACAATCGATCGACTGATGTCGAGAGATG
CCTGTAGCTTCCTCGTAGCTCAATACAAAGGCCATCTTCCAATCGACTCA
TGGGCAACGTTCCTCGTTCCCGTACAAAACCAATACGTCTACATTCTTCC
TCAAAATGATCGTTAAGCTTCGCAAGCTCTTCACCCTGCCAGTCCAAACA
TAGAAGTGTTTTCAAATTCATTCACTAAGCATATAATTAAATTCCGAATA
AGATGGCTATAATGTTGGTTACTATAGCAATAGTTATAAAATGGAAGATC
ATAAATCCACCATGAcaccattttcatcatggacatccttataaagtgta
ttcttataaaagaaaaagcgtgtattcaggACTTTCTCCGGCGGGATGAC
CGGGATGAAAAGGGATCTCATCgatctcatggacaaaattgtttacaata
TCGTGTATAAGGATGGAAAATGATGACGTAACGTGGTAGTAGCAGTAACG
AGAcaatattgcgttgtcaaggtaatgaatcctcattcataaaaagctta
aagggaaaataagaaacatgaaattagatgatatatggtgagtgtactga
aatttcctcaaaaatagctcacaaaagtttctttcaatctttgataataa
tttccaaaatagtgcctggtaagtatcaacaagaacacagTTTAAACATA
AAAGaacatagaaaaaaatatttgtacttactgtcgaagtaccataacac
aggatctttaagcattcttgttgggagtagagtatgttgaatgacgattg
tcgaataaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072748-exon-scaffold_82-1491911889:238903..240113 | TCONS_00072748-exon-scaffold_82-1491911889:238903..240113 | Clytia hemisphaerica | exon |
| TCONS_00072748-exon-scaffold_82-1510915933:238903..240113 | TCONS_00072748-exon-scaffold_82-1510915933:238903..240113 | Clytia hemisphaerica | exon |
| TCONS_00072748-exon-scaffold_82-1575043694:238903..240113 | TCONS_00072748-exon-scaffold_82-1575043694:238903..240113 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_82 | supercontig | scaffold_82:238903..240113 . |
Blast
The following BLAST results are available for this feature:
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