TCONS_00072735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072735
Unique NameTCONS_00072735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1627

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072735 ID=TCONS_00072735|Name=TCONS_00072735|organism=Clytia hemisphaerica|type=transcript|length=1627bp
GATTTTTGAATGGTCTGTAAATATTTGATTCTGATGCTGATGAtgaaata
ccAAAAAGTTTAAATGATGAGTATGCTAtttaaaaatacttaaaaatact
CACAATTACATCAATAAAATTATGGAGGTCCAAGATTCTAATGTTGAACG
GAACAATCAATTTGAACACATCAAATTGGAGGAAGAGGAATCTGATGGCA
GTATAGCTGACGTTGACGAGGATGTTCCAGAAGCTACGGTGgtcaagaag
aagaagatgacaaaaaagaagaaaatctacTTTCGAAGTGATTTCACTGG
TGAACTTGAATCTTCCTCTGATGAAGATGATCTTTCAGATCGAGATAAAA
AGCAAGGAATCTGTGCTCTGAATCCTCATGAATTGGGTTGGGGAATGTGG
GTTTGGTACTACGTGGTTGTGGCTTCTACCTCTACTTTTCATGCTGCTGA
ATATTGTGGTGAAAAATTGGCAGATTTCTTTGGTATAACATCACCAAAAT
ATCAATACGTTATTGATGAGTATCATCGGCTTAAACAAgtgGAAGAGGAA
GAAGAGGAGGCAGAGCGACAAGCAGAAGAATACCTTCGTCAACAGCAATT
ACAACGTATGCAACAAATGGAAGGTGGACAAGAAGAGGATGAGCACCAGT
CATGAAGTTTGAAACCTGATAGATAAGGTTGGATCATCTATGGATGTTAA
GAGATGCTGCATATGTTTGGTTGGGAATAGTTCATGGTTATacagaaatc
agaaaatcataaaaaacagATTTGTGCTTTAATCCAGAGTTCGGATGTCA
CTGTCACAGCTTCCACAAAAGTTTGCTGTAACTCTTCCCTAACAAAgata
ggtttgtgtcaatcggAGCCAGGCAgctattttgtcttttttttattgTG
GTGTAAAATAGGTAAGTCGAGGGAATTGTATCGTTTTGATGTTTGACAGC
GTATTTCGATATGAAAAGTATCACGTCTTTTGGGTTAGGAGAAGACTTTA
CAACAGTTACTCATTGTTATAGtatctatttatttattatagTTTATACT
GGTTTATATGAATTTaagttctttatattttttgaagttataatatatat
tttggtATCATTAACATTCATCAATACACACCATTTGCATTGCTATTTTC
AAAGGATTTTTCAAAGTTCTAAAAGAAACTGTTAATCATATTTGTTTAGA
ATCTTACTTTATATTTTAGTATATCGTTTTTTACGAAAGTGCAAGCACCT
TTTACGTTTTAATTGCTTTCCTGTAGGATCTAGTGCGTTGTTAATTTATT
agttatttttcatattttataaatttaggTCGCAAACTCAACTCGAGCAC
CTTCCAATATTGTTTTAGAATTTCAAGGTATATTTAATctcttaaaaaat
gtttttctcttctatctgtgtctttcttttattcttgTTTATAGATtatc
tttctcacaaaatgaatttcgaatgcaattaaaacgttcgatgaaaaaaa
agtgtaagaaaaaaacattagaatcaattttttaaacattggcgcggcat
cgaagagtgtgattaacgattaattgctccctacaggatgcaattaacga
ttaattgctctctttgatagggggggg
Run BLAST on NCBI

protein sequence of TCONS_00072735-protein

>TCONS_00072735-protein ID=TCONS_00072735-protein|Name=TCONS_00072735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MEVQDSNVERNNQFEHIKLEEEESDGSIADVDEDVPEATVVKKKKMTKKK
KIYFRSDFTGELESSSDEDDLSDRDKKQGICALNPHELGWGMWVWYYVVV
ASTSTFHAAEYCGEKLADFFGITSPKYQYVIDEYHRLKQVEEEEEEAERQ
AEEYLRQQQLQRMQQMEGGQEEDEHQS
Run BLAST on NCBI

transcript from alignment at scaffold_82:524670..539666-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072735 ID=TCONS_00072735|Name=TCONS_00072735|organism=Clytia hemisphaerica|type=transcript|length=14997bp|location=Sequence derived from alignment at scaffold_82:524670..539666- (Clytia hemisphaerica)
GATTTTTGAATGGTCTGTAAATATTTGATTCTGATGCTGATGATGGTAAG
GATAATTTTTTTTCAAACTAGCAAGGAAACTTTGGAAACTCCTAGCTAGA
TAGACAGTACTAATTGATAAATTCGATTATTGAAGTAATTGATACCATTT
CCCATCGAAAACAACCAAACACATTGCTACTTCTGAAAGCCGTGAGACCA
AAACAAATTATCTTCCAAGATTATGGCGCCCTTCTGGATCTATTATTGTT
AAGGCCATCTAAAATGGTAGAAAGAGAGTTATGCGGAAAGACAGAGGCGC
CCACTGCTTTGAAGGTAGTCCGGGAGCCAAACCCAAAAAATGGCATTTTG
CTTAACCCAAGATTCTACAGGATAAACTATACATTTTTGGAATCCTCAAC
TATCCTAGTTTTGGAAATGGTCAGTCCCCAAAGCTAACTCCTGGTCAATT
TTTTATACTGGGACCAAGTTTAGGGGGTACTTTTTACCCTTCGTAAGGAT
TTGTTAAGGAAAATGCCATTCCAGGGATGATATAATTTGCTGTATCTAGT
CAATCAGTTGACCAATTGCTTTGAAACTTTACAAAAAGTTTGAAGGTAGG
CTGATGATTATTTTCGGCAAAAAATTTTTGTGAAAAATTATTTTTATAGG
TTTGCCTGGGGAAAAAAGGGGGAAATTTGGGTATTTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGATTGACTAGATACAGCAAATTATA
TCATCCCTGGAATGGCATTTTCCTTAACAAATCCTTACAAAGGGTAAAAA
GTACCCCCTAAACTCGGTCCCAGTATAAAAAATTGACCAGGAGATAGCTT
TGGGGACCGACCATTTCCAAAACTAGGATAGTTGAGGATTCCAAAAATGT
ATAGTTTGTCCTGTAGAATCTTGGGTTAAGCAAAAGTGCTTATTTAAGGA
GATATAGGATTTGGCTCCCGGACTAAGGGTGGTAATACCAAAACGCCAAT
TATGATCTTCCATAACAGAAGGCAAGTTAGTTTCTGCTGCGCGAGTTACG
TCATGCACTCCACCAGACTCCACCGCAGCACACAACGAACGGTGATTTAG
TTATTATTAATAATTATCGACTGCCGGATACAATTTCTTTCATAGTGGTA
CACTAATCTCATTTTGCCTTGGCTCATTACTTTATCTACCATTTACTTTT
GGTTTTTTAAACTAGATTTCCCAGGTGTTTCTCTTTTTTTTTCCCTGAAT
GTCTTTTATCGGGAATTGAATAATCGAGACATGAAAAATGACTACCATGA
GAGGTCCTAAATCCGACACCACTGCCTAGTACCGACCCCCCAAATCTGTT
ATGAAAAAAATTCTATGTTTACAAACATTCCCTCTCCAAGTTGAACGATA
AACTATTGCCAGAACTCTCGAAACAAAACATCTAACAAGATAGCTGTAAT
GTCAAGATGTAAATTAATGTAATTAAAAAGTGTGCGTTGTAAAAATAATT
ACCTTTTATTCTGGATCAGTTGCTCATGTTTAAAACGATAACAGTTTTGT
AATAAAAGTGACTTGTTCGGGAAAAATACGAAACAATATGGGCTGGTTTC
CATCAAGAAACAAACAGACTAAATTGCAAAAATGGTGCGAAGCTCTTAAT
TTGAATAACAAACATCGAATCAATGAGGCGGCAACTATCAACGCCCTCTT
TACCCACCCATAAGTCCGGATGTTTATTTACGGAAGGCCCGCAATCAAGC
CAAGTGCCAGTGTAAAGTAATAAAAACCAGGCTTGATTACGTAACGTTTC
AAAATGAGCACGCTGGTACACAGACCTCTTTTATATTTTTGTGTGCTTTG
GAAAATCAAAACATCTCATTACTTTTTATGATGCTGTTACTACTGTTGTC
ATTTATGAAGTTGTGCATATTGGAATAAAAAAATATGTTTTGTTATAAGA
AGCAATCATTGTTATTNGTTGTGCATTTGCAATAAAAAATATGTTTTGTT
ATAAGAAGCAATTGTTGTTATTTGGTTCAATTGGTTCAGTGTATCAAATC
TCTCAGTTTAGTTGACACTTTGTAATAATTGCTGAAAGTTTGAAAAAGTT
TTTCCGATGTGAAAAAAAAAATTCAGTCAATTAAAAGCACAGTGTGCTTA
TACTTACTTTGTTTGCTACATCGTCTAAGCTAACAAAAGTGAGAAAAGAC
ACGAACACCATTTTCTAATGAGTGTTGTTATAATTTTTTTGATTGCGGTC
GCATACAGGAACTCGCCAAATGTTCATAAGGACATGTTTTTTAATTGTTT
CGTTTTTAGGGGTCTTGGGAAATCATCATTCATTTCTAATATAATGAATG
AACTAAATTTATGCCCTGATGATGGTTGCGTGGAAAAGATGAACTTTAAA
AATTTAAAAGAATTTTTTATAAAGCTTAAATCTGTCATGACTTATGCTTC
AACAAAGTGCGGTCCAAAAATGAGCCAATACTTAGCATTTTAGTAGGAGC
AAATACTTAGCATTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAA
TCACTAAAAATGGTTGTATGGTCCTATTATGAGCATGTTTTTAGCATTGG
GTGTGGCTTTTTTTTAATCCACCAGCACAGTTAAGATAAACACAAAAGAA
CTATGATATTGATATTATGCATACTTGAGGCATTCAAAAAGATAGAAAAA
CCAAATTTGGCCGATACAAAGCATTCCAGGGTCCTTTTACGAGCAGAGAT
TTAGCATTGACTGGACACAGAGTTCTTGAAGGCCATGTCTTTATGCTAAA
ATTTGAAAACCCGAAGGTTATTGTTATTTCATAGCTCATTTAGGCGCTAT
TTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATCAAATAAGTTAT
TATTAATGTTTGATACACAATTGAACAGAACTCCATGAGGTTATTTTATG
TTCCTAGGTCTCAAAATGAGCTGAATTTAGCAAAAATTAGACTAGGTGTA
AAGTTAATTTTAGTAAGAGAAGTAGAATAAATTGCAGTTTTCCAGTGGAA
AATGCTAAATTTAGCTCCAAACGGGCCCTTTAACAGCTCGAATGTTTTAT
TGGTGTTAATAACTTGATTATTAAACTACTTCAAAGGAAGTTATGAAGGT
TTTACACCCACTCCAGCCTTTTAATTAGGTGTTTAGAAAGATATTAGTAA
TTCTGCTGCAGTATTTTTAGTGGAAAAATGCTAAATTTAGCTCCAAACGG
GCCCTTTAACAGCTCAAGTGCTATATTGGTGTTAATAACTTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTATCAACATTGGCCCCGGCAAGCCATTTTGAGTGAGGGGGCCAACATTT
TGGAAAAAAATGTCGGCCACCATGGTTGGGCGACGAAGAAAACTTTTTCA
CTTTTTACACCCTCAAAACACCTTAAAACGATATCTAATAGGGGAAAATA
ATAGTTTTTGTGGTTTGATTTGGTCTCAAACCAGCTTAAAATAGAAACTC
TTAAAAACGTATGACATGATCTACCAAAAAGTGGGGGGGGNGAAAACAAA
AAAAAACTGACCTAAAAACAGAGCACAAAAAGATCCCAAATCATAAAGAT
CCCAAATAAATCCCATAAAGAGCCCCATCACTCACATATCGATTCATCCC
ACGACTAACGTCAAATTGGCGCTAATTTGAAAACCCCCGACCCTCACCTC
TTAACGTCAAAGTTTAAAAATCATCAAAAATCGATGAAACTCTAAATTTT
CTCATTCACTTGTTTTGTCAGCCATCTTTAATTTTGCTACGGCTTGCTCA
GTTTACATTTTAAAAAGAATGGAGATAATTTCAAAACTTTTTTCTGAAAG
TTGCCGGAATTAAAATTATCTCTGTAATCATAATCAACAGAATAGTTGCA
TTTCACAAAAAAAAAAGACCTTCGGCAAAATTCAAGGGCCGCGCGAACCG
TTTAAACAAAAGGAACAGGAGACATAAACATTGGGCCGTTTGTTTTGGTT
AAAATTGTTCTATAAAATAGCGAAGCGAACGAATACTTTGTATATAAAAG
GAGGAAAAGAAATATGGATCAAGTAACATTTGTCACAGAATAAACGTCTG
GTGGTGAAATTTCTTAGCGTCACAGACTCTAACCCCCCTACCCCTTCGCG
TCAATTTGACGTTAGTCGTGGGAAGAATTGATATGTGAGTGACCCCTTAT
TTCCCAGCCTATTTCCCCACCATTTTGTGTGCCTTAACCCTGGGTTTCCT
CAAGTAATTCATACCGCACATTCCGATTGGTCGGAGAAAACAAAAGTAGT
TTTCGCATGTGAATCACGTGTAAAGTAAAGTAAACACAATATTTTTTTTT
TTTCTTTTTTTTCGAAGGGGATTCCCCTGATATCCACATCCGCTCAGTGA
TTTTCCTATAGGGCGTTGTGGCGTCTGTGGGTTTTACGAGGGAGAGACCA
CTCTTTCCATCCGGATAGGCCCCGCTTGTTTAAGATTGGTCCCTCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACAATGCTACTGGAA
ACATATTTGATAAAATAGAAGGCTGGAAAGTACTCAATACAATCGAAGGT
ATAATATACTTACTTTGTGATACTTCGTTTTTGATTTTGTACTTTATGAA
ACTCATCCAATTCGTGGAATCTGATGATTGACCATTACTGATATACTGTT
GGAATCAGCTCTCCTGAAGGTGAAATAATTAGGAAGCAGTGGTTCGTCTG
GCAGTGTATTGAGGAATTGGTCAAGATGTTGTTTAAAAGTTTGTTTGGTA
CATTTTGTAAGGCTTCGAAGGGATTTTGGTAGAGCATTAAAAAGTCTTCA
TCATCATCTTTCGACTTACACCGGAAAATTTGCATAACCTTCCTTCCACA
ATACCCGATCTTGCATGACTGTCTTTATTTCTTCAATCTCGAGACCTGTT
TCCCTCTTCCTTAATCTAACTAGACCCGTTGGTGACCAGAAAAGAAGTCT
GGATATTATTTCTTCTTTTGCTCAGAAACATTGGTCTGCAAACTGAAGTC
TTCTATTGGTGAGTATACGCGAGATGCGTGGTAGATTATTGTATATTTGA
TTGAGGTTTGGATGATTTCCTGTGGAGAGACAATTCCTCCAAATATTCTT
ATGTTTGACATTAACAGCTTTTAAATTAGATTTTCTACCCATCTATCTAT
CTAATATGATCGAAGGTAATCGAAAAGTAATCGAAATGATTGAACAAATC
GAAAACGGTCCAAGAAATACCATAATCTGGAGTCAAGTGAGTATTCGATC
ACCGATAAAATTGATAGGTGGTCACTGACCACCTTCGATTATTGTCGATC
ATTATTGATTACTTCGATCACAATCGAACGTTCGATTTAGTACCGATTAA
GTAGAAAGTAGTTTTTGCGCATGAATCACATGTTTTAATTAGCTGAAGTA
AACTTGGTTTCAGATTATTTTGACACGCTGCTACTGGAAATATATTAAGC
GATAAGCAGATGGGTGTTTAAGATAAAAACGGGAATTATTGTTCTTTTCT
GCAACTCTTGCTGGCACGGTGTAGGCAGACAATTCTTTGGAAAGGCAATT
TTTTGTCTTTTGAATATGGAATAACTTTGGAAATACTTATATATAACCAA
TTTTAATAAATGACCCCTCATTTTTCACACAAAGGTAAGGACTTTCAAAT
AAAATTAGTTTGGTTTTAAAAATTGAGGGGAGAATTTTGCTCTAACTAAT
GGGCCATTCCAGAATTTGTCTGTAACAAGGGGGCAGGCGACACGGAATTT
CTGAGGGCAAAAGTTTTCACCAAAATCTAAAATTTCCAAGGCGAGAGCAG
GGGGGGGCAAGCAGTTAATACACAACACCTATGACACTTAGTACCGTGGT
GGGTCCTTTTCTGAAATTAGCAAATTGCAGTTAATACACCAGTGTATTAA
CTGTCAAAGGGGGTGGTGTTAAGACAATTTTAGAACTCAAAGAGTGTATT
AACTGCAACTAACTGTAAAACTAAAAATTTGCTAGCTCTTTCTCTAGAAC
TCAACATCAACCTGCATCAAGCCAGATCAAACCCAAGTTTTTATGTCTTA
TCTCAGTATCACATTTTGTAAAAATTTGATTCCTTTCAATCAAACATTCG
ATTTAATTCAAACAATGATTAAATTAAAAACGTTCGAAAATGATGTATTA
TTATTCTAATCTCGATCGGGAGAAGAAAAAAAAAGCAAGATTGTAGAAAG
AAAAAATTTGACATGTTTGAGGTCAATAGACCTTTTCATAAATTACGTTC
CCTGGCGAGAGAAGAAAATGATGCATTTTCCGAAACTACATGGATTTTCA
TCTGAACTTTCGACCACCACAGGTCAATAATGTTTTTGGTTTTTATGAAG
GACAAAAAAAGAAAAGGAAGATTTACTGGAGGCGTCCCTAAAGGTGGGAC
TATTTATTTAAAAGATATGGGCAAAAATACAGTTTTTTGGTGATAATTAG
GATTTTTTTACTTATAAATTTTATTGCTGTTACCCTCATCCCATGTCACC
TTAGCATGAGCAAGGGGACTATATTATGTTGGCAAGGTCTCTTGAAAATT
TCAGTTCAAAACAAAAAAGAACCAATTCCTGTAAGTCAATGAAAATTGGA
AAAAGCTGACTTTGACAGTTTCTGATCCTAAAAGTGCTATTTTCTGGTAA
AAGCTATGCAATTCATGTTTGGATTCCTAGAAAGCTTACCCATTCATTGT
CATTCATTGAATAAACACTGGTAAAATACTGTCAAATTCTTTAGGGTTAT
TTTTCTAAATATAATTTGTCAAAATCATTTTTACCCTATGCAACAAGAGC
TGTGTCAGACACACATCGTGAAAATTAATAACTTTGGGATTCTGTAAAAT
ATCTTCTGAGCTGAAAAAAAGCAACCTTGACCAGCTGCAAGTCCCTGTAC
ACAATTTTGCCGAGGGGAACCTCAGGACTGAGAGGTGACATGCATACTCA
ATTTACCACTACAAACGTCAACTTGACGTTCAAGCTTTTGTTTTGACCCT
GACCCCCTTATCCCCTATAGCAGTTAGAAATTTCTGATGAGAAAATGTGT
TGGACTTGTTGATGTTGATGCAGGTTGATGACTTGTTGATGTTGATGACT
TGCTGAAAAAGATGCCTTGGTGATCCTTTCAATAAAAACCACTTAATAAA
TTTGAAGCCCTGCTTTCAATGCCTTTTCTTTCCTTAAGAGATCTAGCAGG
AATAGGAGACCTGGCTATAAGTAATGTATGATTTTTAAAAGTAACAAATC
ACATGATTAAAAGTCAGATTGGTTTTTTTTTTTTTAAATGATATATTTTG
AACTTTCGTTTTCAAAATTAGCTCAAAATTTATTTTGGCCATTCTTTGTT
ACGTTTAGAAACACTTCTTTGTCAATGGGTGAGGGTGCAAGGGATGGGAG
GGAGAATTGATATTTTATTGGTATATATTACCATATCTGTAAATGGCAAT
TCTGGAAGGTTGTAAATATTTCTTCTCAAATACTCTGGGTCTAAAGTAAA
ATCTAACATGTAACAATCTCATACAGTCTCATAAAGGCTAATTCCACATT
GTTTAAGAAAGCATTTTCCAATATATTTTAATTATTTTATTTTAAGAAAT
ACCAAAAAGTTTAAATGATGAGTATGCTATTTAAAAATACTTAAAAATAC
TCACAATTACATCAATAAAATTATGGAGGTCCAAGATTCTAATGTTGAAC
GGAACAATCAATTTGAACACATCAAATTGGAGGAAGAGGAATCTGATGGC
AGTATAGCTGACGTTGACGAGGATGTTCCAGAAGCTACGGTACCTTATCA
TCATTTCTCCTTTATTGTTGCTGTTGTGAATAGTACACAGCATGGTTGTA
TTATTTCTCTTTATTTCAAAGAGTAATCAAAATTGATTCTATGAATACTT
ATTAAATAACCGAGGTGAAATTTTTCTCCATGAATTCTCTTCATAATATG
TCATCATTTCCCTATAGGTGGTCAAGAAGAAGAAGATGACAAAAAAGAAG
AAAATCTACTTTCGAAGTGATTTCACTGGTGAACTTGAATCTTCCTCTGA
TGAAGATGATCTTTCAGATCGAGATAAAAAGCAAGGAATCTGTGCTCTGA
ATCCTGTAAGTTTTCCTTCATAACTCATTATATTCATGATATGCACCACT
GGAGAGTCTTCTGAGAACTTTTAACGTTTTCCACCCAATACGTCACTTAA
ACAATAGAAAAAGTGACGTATTGGGTGGAAAAAAAAACTGAAAAGTTGCA
TAATTTCTTGAAGCCATTGCAGTGGTGCATATCATGATGATGAATACTGA
AAGGGGTAAACATCATTATGTCATTGAAATTCAAATGTTGGCAAGTCTGT
CACCAAATCCATTATGCAAGATTTTTTTACATTTTAATCATTTATTTCTC
TATTCTCTAAGAATTTGGATATTTCATCTGGCTTTCTTTTGATTTTTACA
GCATGAATTGGGTTGGGGAATGTGGGTTTGGTACTACGTGGTTGTGGCTT
CTACCTCTACTTTTCATGGTAAGTATACAAGGTCAAATTTATGCATAACT
ATAAACCCTCGAATGTGACGGAGCCCGATTATCAAAAAAAAAAAATTGGG
GGGCAAATTTGGGCCAAAAAAAGGCTAAAAACGGGTTTTTTGGACTTTGT
GAAAAATTAGGTCGTTAATTTTTTCTGATTTTTTGCATGAAAGTAGGATA
CCATCGTAGGTAAAAGATGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTTAAGCGAATTTTTGCA
AAAAAAATTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTA
TTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTCTTTATG
AGATTGATGTTTTTTTTGCTCAGGAGGGCTTACTTTTAAAGAATATTTGT
GTTTCGACATGAAATTTTGGTTGCTTGGCGTGTTTTTATAGAAAAACTGG
CCAAATTCGATATTTTTTTATAAGCACATTATCAATTACTTAGGTATTAG
CTTTTCTCGAGATTGGCTCTTTCATTCTTTAATATTTTTGGAACAAAGAT
GCATAACTATAAACCCTCGAATGTGACAGAGCTCGATTTTTGGGGAAAAG
ATTTTGGGGTAAATTTCAGCTAAAAAACGGCTAAAAACGGGTTTTTTGGA
ATTGGTATTTTCAGACTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAG
CAGATTTTTGTAAAAAAAGAATTTTTCAGCTCAAAAATGCATATTTATCT
ATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAAGATTACTGAT
TTTTTTTAATGAGATGTTTTTTTGCTCTCGAAGTTTTGAATATGAAAGAA
TATTTCAAGAGCGTGAAATTTTGGTTTCCAAACGTGTTTTTTTTATAAGA
AAAAAAGGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATT
GTTTAATGGCCACGCTTATGTAGATTGTAGATATCAATTATATATGTGTT
AAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTGCTTTTAATT
TTACTATCAGTGTTTTTGGACAACCTAGTTTTTTTTTATTTCACTTATAG
CTGCTGAATATTGTGGTGAAAAATTGGCAGATTTCTTTGGTATAACATCA
CCAAAATATCAATACGTTATTGATGAGTATCATCGGCTTAAACAAGTGGT
ATGAATTTCACTTTCATTTTGAATTCTATTTTACGTGATTGAAAGTTGTC
CTTTGTTCTTTTTTCAAATGTCTGCTCGGTGGTCAGTGTGAAGGCGTGAA
TGAATATTTTTGTAAAGCATATTGAAAAATAATATATAATAAAAAATTTT
TATGGACATGAAAATCTTCCTCGCCTTGGAATTAAATGGTAGTCCTGGAT
TTAGATCAAGTTTTTCGAACTTTCCACAATTTCCAGAGAAATTTTTCAAG
TTGCCTGCAAACTTACTATAGACGAAAATTAAACCTGTGTTCGTTCTTTC
GTTCGTTACTTCATGGTAATTGGTAATACTCAAAATGTGACGAAACCCAA
TTTTCAAAAAAAAAATTCTGCACGCCAGAAAAGCAGAAATGTCAGTTCAG
TTGTCAATGTTCAGTTTTCCTGAATTCTTTCGAGATTTTATCATTAAGTT
TTCCCTGATTTTTTGTACAAAGATGTGTATTAGTACTGCCATCAGTGTTG
AAAACAGTTACAGTTTCCTGGAGAAAAAAATTCCATCTGTAGAACTGTGG
TGGTAGAGCCCAATTTCCGAAAAAAAATTCTTTTTGGTTGCCAGATCTAG
AAATTTACCGAATAAAGTTGTATTTTCGAGATTTTATTTTTTCTGTGTTC
AGTAAGTATTTCTAGACTTTTCATACAAACTGATTATGATGGTGGTGTAC
TTCTCTTGTAGGAAGAGGAAGAAGAGGAGGCAGAGCGACAAGCAGAAGAA
TACCTTCGTCAACAGCAATTACAACGTATGCAACAAATGGAAGGTGGACA
AGAAGAGGATGAGCACCAGTCATGAAGTTTGAAACCTGATAGATAAGGTT
GGATCATCTATGGATGTTAAGAGATGCTGCATATGTTTGGTTGGGAATAG
TTCATGGTTATACAGAAATCAGAAAATCATAAAAAACAGATTTGTGCTTT
AATCCAGAGTTCGGATGTCACTGTCACAGCTTCCACAAAAGTTTGCTGTA
ACTCTTCCCTAACAAAGATAGGTTTGTGTCAATCGGAGCCAGGCAGCTAT
TTTGTCTTTTTTTTATTGTGGTGTAAAATAGGTAAGTCGAGGGAATTGTA
TCGTTTTGATGTTTGACAGCGTATTTCGATATGAAAAGTATCACGTCTTT
TGGGTTAGGAGAAGACTTTACAACAGTTACTCATTGTTATAGTATCTATT
TATTTATTATAGTTTATACTGGTTTATATGAATTTAAGTTCTTTATATTT
TTTGAAGTTATAATATATATTTTGGTATCATTAACATTCATCAATACACA
CCATTTGCATTGCTATTTTCAAAGGATTTTTCAAAGTTCTAAAAGAAACT
GTTAATCATATTTGTTTAGAATCTTACTTTATATTTTAGTATATCGTTTT
TTACGAAAGTGCAAGCACCTTTTACGTTTTAATTGCTTTCCTGTAGGATC
TAGTGCGTTGTTAATTTATTAGTTATTTTTCATATTTTATAAATTTAGGT
CGCAAACTCAACTCGAGCACCTTCCAATATTGTTTTAGAATTTCAAGGTA
TATTTAATCTCTTAAAAAATGTTTTTCTCTTCTATCTGTGTCTTTCTTTT
ATTCTTGTTTATAGATTATCTTTCTCACAAAATGAATTTCGAATGCAATT
AAAACGTTCGATGAAAAAAAAGTGTAAGAAAAAAACATTAGAATCAATTT
TTTAAACATTGGCGCGGCATCGAAGAGTGTGATTAACGATTAATTGCTCC
CTACAGGATGCAATTAACGATTAATTGCTCTCTTTGATAGGGGGGGG

Coding sequence (CDS) from alignment at scaffold_82:524670..539666-

>TCONS_00072735 ID=TCONS_00072735|Name=TCONS_00072735|organism=Clytia hemisphaerica|type=CDS|length=2670bp|location=Sequence derived from alignment at scaffold_82:524670..539666- (Clytia hemisphaerica)
GAAGAGGAAGAAGAGGAGGCAGAGCGACAAGCAGAAGAATACCTTCGTCA
ACAGCAATTACAACGTATGCAACAAATGGAAGGTGGACAAGAAGAGGATG
AGCACCAGTCATGACTGCTGAATATTGTGGTGAAAAATTGGCAGATTTCT
TTGGTATAACATCACCAAAATATCAATACGTTATTGATGAGTATCATCGG
CTTAAACAAGTGCATGAATTGGGTTGGGGAATGTGGGTTTGGTACTACGT
GGTTGTGGCTTCTACCTCTACTTTTCATGGTGGTCAAGAAGAAGAAGATG
ACAAAAAAGAAGAAAATCTACTTTCGAAGTGATTTCACTGGTGAACTTGA
ATCTTCCTCTGATGAAGATGATCTTTCAGATCGAGATAAAAAGCAAGGAA
TCTGTGCTCTGAATCCTATGGAGGTCCAAGATTCTAATGTTGAACGGAAC
AATCAATTTGAACACATCAAATTGGAGGAAGAGGAATCTGATGGCAGTAT
AGCTGACGTTGACGAGGATGTTCCAGAAGCTACGGAAGAGGAAGAAGAGG
AGGCAGAGCGACAAGCAGAAGAATACCTTCGTCAACAGCAATTACAACGT
ATGCAACAAATGGAAGGTGGACAAGAAGAGGATGAGCACCAGTCATGACT
GCTGAATATTGTGGTGAAAAATTGGCAGATTTCTTTGGTATAACATCACC
AAAATATCAATACGTTATTGATGAGTATCATCGGCTTAAACAAGTGCATG
AATTGGGTTGGGGAATGTGGGTTTGGTACTACGTGGTTGTGGCTTCTACC
TCTACTTTTCATGGTGGTCAAGAAGAAGAAGATGACAAAAAAGAAGAAAA
TCTACTTTCGAAGTGATTTCACTGGTGAACTTGAATCTTCCTCTGATGAA
GATGATCTTTCAGATCGAGATAAAAAGCAAGGAATCTGTGCTCTGAATCC
TATGGAGGTCCAAGATTCTAATGTTGAACGGAACAATCAATTTGAACACA
TCAAATTGGAGGAAGAGGAATCTGATGGCAGTATAGCTGACGTTGACGAG
GATGTTCCAGAAGCTACGGAAGAGGAAGAAGAGGAGGCAGAGCGACAAGC
AGAAGAATACCTTCGTCAACAGCAATTACAACGTATGCAACAAATGGAAG
GTGGACAAGAAGAGGATGAGCACCAGTCATGACTGCTGAATATTGTGGTG
AAAAATTGGCAGATTTCTTTGGTATAACATCACCAAAATATCAATACGTT
ATTGATGAGTATCATCGGCTTAAACAAGTGCATGAATTGGGTTGGGGAAT
GTGGGTTTGGTACTACGTGGTTGTGGCTTCTACCTCTACTTTTCATGGTG
GTCAAGAAGAAGAAGATGACAAAAAAGAAGAAAATCTACTTTCGAAGTGA
TTTCACTGGTGAACTTGAATCTTCCTCTGATGAAGATGATCTTTCAGATC
GAGATAAAAAGCAAGGAATCTGTGCTCTGAATCCTATGGAGGTCCAAGAT
TCTAATGTTGAACGGAACAATCAATTTGAACACATCAAATTGGAGGAAGA
GGAATCTGATGGCAGTATAGCTGACGTTGACGAGGATGTTCCAGAAGCTA
CGGAAGAGGAAGAAGAGGAGGCAGAGCGACAAGCAGAAGAATACCTTCGT
CAACAGCAATTACAACGTATGCAACAAATGGAAGGTGGACAAGAAGAGGA
TGAGCACCAGTCATGACTGCTGAATATTGTGGTGAAAAATTGGCAGATTT
CTTTGGTATAACATCACCAAAATATCAATACGTTATTGATGAGTATCATC
GGCTTAAACAAGTGCATGAATTGGGTTGGGGAATGTGGGTTTGGTACTAC
GTGGTTGTGGCTTCTACCTCTACTTTTCATGGTGGTCAAGAAGAAGAAGA
TGACAAAAAAGAAGAAAATCTACTTTCGAAGTGATTTCACTGGTGAACTT
GAATCTTCCTCTGATGAAGATGATCTTTCAGATCGAGATAAAAAGCAAGG
AATCTGTGCTCTGAATCCTATGGAGGTCCAAGATTCTAATGTTGAACGGA
ACAATCAATTTGAACACATCAAATTGGAGGAAGAGGAATCTGATGGCAGT
ATAGCTGACGTTGACGAGGATGTTCCAGAAGCTACGGAAGAGGAAGAAGA
GGAGGCAGAGCGACAAGCAGAAGAATACCTTCGTCAACAGCAATTACAAC
GTATGCAACAAATGGAAGGTGGACAAGAAGAGGATGAGCACCAGTCATGA
CTGCTGAATATTGTGGTGAAAAATTGGCAGATTTCTTTGGTATAACATCA
CCAAAATATCAATACGTTATTGATGAGTATCATCGGCTTAAACAAGTGCA
TGAATTGGGTTGGGGAATGTGGGTTTGGTACTACGTGGTTGTGGCTTCTA
CCTCTACTTTTCATGGTGGTCAAGAAGAAGAAGATGACAAAAAAGAAGAA
AATCTACTTTCGAAGTGATTTCACTGGTGAACTTGAATCTTCCTCTGATG
AAGATGATCTTTCAGATCGAGATAAAAAGCAAGGAATCTGTGCTCTGAAT
CCTATGGAGGTCCAAGATTCTAATGTTGAACGGAACAATCAATTTGAACA
CATCAAATTGGAGGAAGAGGAATCTGATGGCAGTATAGCTGACGTTGACG
AGGATGTTCCAGAAGCTACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045145XLOC_045145Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072735-exon-scaffold_82-1575043694:539622..539666TCONS_00072735-exon-scaffold_82-1575043694:539622..539666Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1575043694:528428..528620TCONS_00072735-exon-scaffold_82-1575043694:528428..528620Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1575043694:528112..528249TCONS_00072735-exon-scaffold_82-1575043694:528112..528249Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1575043694:527699..527765TCONS_00072735-exon-scaffold_82-1575043694:527699..527765Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1575043694:526469..526566TCONS_00072735-exon-scaffold_82-1575043694:526469..526566Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1575043694:524670..525755TCONS_00072735-exon-scaffold_82-1575043694:524670..525755Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:539622..539666TCONS_00072735-exon-scaffold_82-1510915933:539622..539666Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:528428..528620TCONS_00072735-exon-scaffold_82-1510915933:528428..528620Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:528112..528249TCONS_00072735-exon-scaffold_82-1510915933:528112..528249Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:527699..527765TCONS_00072735-exon-scaffold_82-1510915933:527699..527765Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:526469..526566TCONS_00072735-exon-scaffold_82-1510915933:526469..526566Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1510915933:524670..525755TCONS_00072735-exon-scaffold_82-1510915933:524670..525755Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:539622..539666TCONS_00072735-exon-scaffold_82-1491911889:539622..539666Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:528428..528620TCONS_00072735-exon-scaffold_82-1491911889:528428..528620Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:528112..528249TCONS_00072735-exon-scaffold_82-1491911889:528112..528249Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:527699..527765TCONS_00072735-exon-scaffold_82-1491911889:527699..527765Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:526469..526566TCONS_00072735-exon-scaffold_82-1491911889:526469..526566Clytia hemisphaericaexon
TCONS_00072735-exon-scaffold_82-1491911889:524670..525755TCONS_00072735-exon-scaffold_82-1491911889:524670..525755Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072735-proteinTCONS_00072735-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:524670..539666 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.34477	8.24653	12.5135	13.6179	39.3074	28.1284	28.3033	29.4816	27.1429	29.223	24.1568	21.4785	16.5565	14.4423	10.1153	10.7533	22.67	25.4114	16.3568	21.9588	23.7549	22.051	13.6531	15.5909	21.0064	20.8814	18.2855	13.519	12.8894	13.2411
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR028260FAM177
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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