TCONS_00072714 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072714
Unique NameTCONS_00072714
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1725

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072714 ID=TCONS_00072714|Name=TCONS_00072714|organism=Clytia hemisphaerica|type=transcript|length=1725bp
GCATATATAAAGTGTACTCGTCTTCGTATTCATTTTCTCATTCTACTAAG
TTCTTACACAAACAGTTGTATGAAGGGAACCTCCAGGGAAGACAATGCTT
GAAGTGATTGCAAAGACAAGTTCAAGTATACTGAACAACAATTCAATCGT
TGGTATTGATAACAAGAAGATGATTGCACATCAACGTTTACCAGTTCACG
TAGAATATTTACAGCCGCACATCACGACAACGGAATCCAAAGCATCGCCA
CTAGCATTGCTAGCAGCAACTTGTAGCAGCATCGGAAAGACAGACGCCGA
AAAGAAAGACTTGAAAACAACAACGACCACACCAACCATTTTGAGCAAAT
TATCGCCATCACAAGACAATACGAAGAAGTCATCCTTTAAACCGTACAAA
CTAGACGATAAACGTACACCACCGCCCTCTACAATGCGTTCATCACCGCC
CGTTCTCGTCTCAAATGCAAACATAGTCTCTACAAAAGCGTCCTTACCAA
ATAGCCCAGTACGTATCACACCAATAAGAGGACCAGCTGAAAAAACATCC
ATTATTACACCACCTAGCTCTAAAGACATTGATGAATACGCTAAATATCA
AGAGAAAATGAACAGAGACTTGAAATGTCATTCGGTGTCTCCACCGTTAC
CGCATTTCCCTCCGAGGGTTCACATGTTACCACACCACGGACCAAACCAT
AACCATGCTGATTGTCTACAATGTAAAACAGTAGGTCGACCACCACACAG
CATACACAGCGATCTTCATCCACCACCCGTCCGCCATGGTGCCGCTCCAC
CACCCTGCGCATGCGCTATGTGTCGCAATGGGGACAGCAAATGTCACATC
GGACACTCACCACTACCTGGCATGTACCACCCTCCGCCACACAAAGGAGC
TCCACTTCCACCATCCCCCGGTATGCCATGCCGTGATCCAGCATGTACCA
ACTGTACTAAACTTCCACCGAAAACCTTACAAAACTTCGTTCATCCCGCT
CTCGTACATCAATGTACGCACAGTTCACCAGCTGGTCCGCATAAGGGACC
CTACCCGCCACCTCCACCAAGCGTAGCCGCTTACGATTCTTACTTTCTTA
AAAATAGACTTTCACCACACACCAAACCAAAACAACACATCTGTAACTGG
GTATTCGAAGGGAAACAGTGCGGGAGCAGTTTTGTAACACCCGAAGAACT
CTATCAACACTTACGTACGCACACATCTCTTCAACAACAACGTAACAACG
AGAATGAATCACGTGCGTCAACGGCACTGTCTCCCTTACCACAAACACAC
GGACCCATCCCATCACCTCACAACCAACCGGGTGTTTGTAACATCCACGG
GTGCCCGTGTGGTGGAAACCCACGAAAAACACCACCACGTTCAATTATGC
CCGGCTACCCTTACGGCTCTTCCGCACCTTCTGGACTTCGGTATACGCCT
TACGGGCGACCAGTATCGGCTGGCGGTAATAGCCTACCAGGGCATTTCGG
TTCACACGGAATGTATCATTATTAACGGGAGATAAACATTAAATTTATTC
GGTTTATAAAAGTGTAAAATATTTGTTCATGTCAGGATGTtgtaaaaagg
aaatttttgttcATAATGTTGTatcatatataaaaatattgtattAGATT
CACCCATACTTtagtatttttgttttaaaaagaaatttttagagaaagaa
aaaattcaaggaGAAAATAAATTAA
Run BLAST on NCBI

protein sequence of TCONS_00072714-protein

>TCONS_00072714-protein ID=TCONS_00072714-protein|Name=TCONS_00072714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
MLEVIAKTSSSILNNNSIVGIDNKKMIAHQRLPVHVEYLQPHITTTESKA
SPLALLAATCSSIGKTDAEKKDLKTTTTTPTILSKLSPSQDNTKKSSFKP
YKLDDKRTPPPSTMRSSPPVLVSNANIVSTKASLPNSPVRITPIRGPAEK
TSIITPPSSKDIDEYAKYQEKMNRDLKCHSVSPPLPHFPPRVHMLPHHGP
NHNHADCLQCKTVGRPPHSIHSDLHPPPVRHGAAPPPCACAMCRNGDSKC
HIGHSPLPGMYHPPPHKGAPLPPSPGMPCRDPACTNCTKLPPKTLQNFVH
PALVHQCTHSSPAGPHKGPYPPPPPSVAAYDSYFLKNRLSPHTKPKQHIC
NWVFEGKQCGSSFVTPEELYQHLRTHTSLQQQRNNENESRASTALSPLPQ
THGPIPSPHNQPGVCNIHGCPCGGNPRKTPPRSIMPGYPYGSSAPSGLRY
TPYGRPVSAGGNSLPGHFGSHGMYHY
Run BLAST on NCBI

transcript from alignment at scaffold_82:557395..565925+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072714 ID=TCONS_00072714|Name=TCONS_00072714|organism=Clytia hemisphaerica|type=transcript|length=8531bp|location=Sequence derived from alignment at scaffold_82:557395..565925+ (Clytia hemisphaerica)
GCATATATAAAGTGTACTCGTCTTCGTATTCATTTTCTCATTCTACTAAG TTCTTACACAAACAGTTGTATGAAGGGAACCTCCAGGGAAGACAATGCTT GAAGTGATGTAAGTgaactttaaattttatattAAGGAAGGATCATATCC ATGATTCAACTACAATCTCAGACTAAAATCAAGTTAAGAGGCCAGAACTC CAATATTTTTCCTGCGACCTTAAATAACAGTCATATTGGCATAAATATTC CTTGGTTTTTCTCGTTTAGCAACACTAAATCTCATTAGATTAAATTTCCC TTTTCACAAATTGTCGTTTAGTCCTCCAGTCAAGAAATTAAATCAACTGA AAAACTAACTTAAATGAAAAGCTTTTGGGAAATCGTTTATTCTAGTTTTT GAAGATTGACTTTCAAAAGCAAGATGATAAAATTTCCATATTCCACAAAT GCATTTGCACTAACACACAAACTGGTTTTCCTTTGAAAGACACgaaatga tttttctttaaaaatacaagaaaggattttccttaaaaaatacgcATAAT AGTCCTCTCTCAACAATACACAAGATGATTTTCCATCGAAAAGACACAGA ATAAtggttttccttcaaaaatacacaaaatgattttcttccaaacacac aaaattattattttggaaGTTAATAGACGAGATTGAAATGAACCAGTGAG AACTGTTTAGCTATTTAATATTAATGAGTTACATTTTACGCTCTCTagtt cgattttcaaggggaattggattttcatcgaataagtgTATCGTCtttta taagagtttctatTTGACGGTGACTTTTAATATATCATCGAATAATGAAG CACATCGAAAGAGCGTAGCACGTCGAAACGAGAGCGTCAAATATAAAAAT TCCAATAAGTATGGGAAACCTCTTGCTCTTATGTGAGACACttaaaaaat tcagttggaatGGTGATTTTAActcggaatttaatttttcccaGTGGAAA AAGAGATTTAACTGAAACTTTGATaagctttttttcaaaagcagctaaca tgattttccttcaaaaatactcaaaatgaTATATCTTCAAAATAGATAAA TAAGATGTCCTTTAAATTTGGATAACATgtttttccttcgaaaatacaCC AAATGACGCTCcttaaaaaatgtacaaaattattgctaaaaaaaaaataa tggaagATCAATGTTTGTCAGATATATTACCTTTGAAAGAATATCATTCT GAAAGAATATCATTCTGAAAGAATATCATTCTGAAAGAATATCATTCttt gtattcttgaaggaaaaccATTTCATCCTACTTTATTTGGGAGTCTACGT GGATTTAgtttcttttcataaatttcaagTGTAACAAACACACTGAGACA GTTGGATAAAGTACTCTTATTTTAGCCTTTTTGGataatttatttgaaaa tttttaaggaACTTTCAGTATATTTAATTAGTATATCCATACAACTAACC TTTGAAGTGATCAGCACTGACCTTCAAGTTCACGACCTAACATCATCAGT TTTAATAGGCCGTAATAGGCTTATTAATATAAGGATAAAGATAAAAGTTA AAGCAAAATTTCAGATTGACGTGTTCAAGACTGTAATCAACATAAAATTC GTTACAGGGAAAGGAAAAGGGAGTAGTTTCCCTGTTAAAGTCTAAGGGCG GACCAGGTTTAAACGCAAAATCCTTATATCCTTAGACAGTGAAAAACTTT AGggtattgagaaaaaaagaacaacaactGCGCTATAATGAGGCGTCAAT GATTAATTTTTCATAGTTTCATGTGCAGGTCATTCACATGTCTTAGGGTT AATGTAAGAATTCAATAATGCTATAGTTCTTCaagttcttcaaaaaaaat tccttctgttaCAAATAAGCATCAGCCTTCAACAACAGGCGATTCCGACA GCTTGACCGCAAgggaataaaattatttttacgcCATTACATCAATACCA TAGAATATCAGCACCATCAACAACTATTATGGTTTCAAAATAGGTCCCAC ACAATGTAAGCAGGCGTGAAGTGGCGGTAAGGGTCCACAAGAGGATAGTG ACGAATTTCAATAATCAAATAGAAATTGCCTTAGGAAAATGGTATTTGTC ActtattaaaagtaaaaaaaacaaaattattcgAGGACTATTACGTGTTT TACGTATGGAAACACTCATACACTTCACACCGGTGAAGTCCTTTTGGCAT TAATAATGATGGAGATTAGCAAAGCATAAACAAAGCTAAAAGAGCGTTAG GTCAGTAAATTGTTGAAGGTGAACATTAGTGCACACGAGGAACGCATCCT TACCTCCAAGTATACGTCCTTTGGCAATAGTCCAAATCCTCAAGAGAATG GTCTCTTGAAAGGTTTACTACCCTTTTTTAAGTATGGGTTGTATTGGAGG GAATAATACAGGGGTTTTCAAACATGTCAGAGGCAACAGATTTGCCTTAC ATTCGTGCCTTATCAACAAGCGAAAAACTTTATACCTTGAAATCGAAATA GATATTTAGAGACTACACGCAGTTTAATGGTAAGAAAGGAAATGGCAACT CACAATACAAATTATTTGCAGAGATACAAATTTAGGGATACACAACCGTT GAAGATAGTAATATTTAGTGTAACAGTGATGTAGTTGCTTTCTACCGGAT CGATGACTCAAAGTAGAACCACAGAAGTGTAAGCGCAAAAATACCTTGGC GTCTGTCAATTATCATCAGCTAAAGTGCGGAAGGGTTTGTTTTATTAAAA GGTgacaaaaacagcaaaatttagAGCAAGAGATATTTAAgatgaaagaa aatttaagtAGGTTATAGATGACGGCGAAAATCAACAGTTGATAGTACTA CGGCGAATATTTGTCTTTTCTTGAACTTTTTTCTTATATtaattcttaaa ttgttttgagaagaaaaAGTGACAGTCAATCTGTGTCTAGCTCTTAAGTG ACTGATATTGACAACAGACAAGTAATATGTctgttttaatgaaaaaaaga aagtgacccctttttgttttaaaggtgatttaaaaaaacggacaaaagat cTCCGTCATGACCTCTTCAATCAAATTCATTGTTCTGTTTTCTATTTCTT TGACAATATGGTCCGAGTTGTAAAGCCTATGTTGAAACATAATATCTATA ATGAGCCGATAGACTCTTAAAATGATTGACAACTGCAGTAAATTTCCact atttttggaattttatgaTGAAAATGAATATGTTATGTGCTTGAAAGttc gaaagaatttttttcgagGAGGTGCCTTTCGAGTGGGGCAATGTTGAATA AGCTTCTGAAAGAAGAGCAAATAAGGCTAAAACCGTTGTCCAACTGATGT CTAAGCAcgtttcaaaagataaaaacacccctgtctcgcagccccggtgg aacattttcttcagcggggataaaaattcttattgaaaTCCCATTGGTAG AAATTGTATTGTactaaggttaaaaaatccagtggggacgGTTTTGGaga acaatttttaaacattaaatttcaaatggggatgggAACAATTACAATTT ACAGGCTAAAATAAAGTTCCAAAGATGAGAAGAGCTGAGGCTCAACAAAA AGTTTActggttcttacaaaaaaaacaagagtGTACATGGACCCTTTTTT AACATGGAAGAGGAAATTTGATCTAAAAAGAAAGATAGACTGTTTGTTGC CAAGACACAGTTCTTTGAGATCACCGACATTGAAAATACGACTAAATATT TAACTTCTTTTTGGCCACGATTTTATGTTTAGGTCACAGATTTCACGTTG GTCAGTTTTAAAGAGGGTTGATATGTGAAAGTCTTGCTNCACAGATTTCA CGTTGCTCAGTTTTAAAGAGGGTTGACATGTTAAAGTCTTagaaaaaaga agatgaaaaaatctCAACTGGGTGATTTGATTGAAGTTTGAAATGGTATG AGAAAAAATTGTTGTGTTAAGAAATGTTACCCACTTGTTTAAGAAAACAT CAacataatgaagaaaaattgaaattcgaaAAAGAAGGCTGGGCGAAAAA TTCTGCGTTGATCTTCTATGCTTTATTAGATGGTTGCTCATAAAATTAGA CCCCTATTGGTAAGGTTAACTTATCAAAGTTGACAGTCAAACTAGATTTT CTTTGTGGGTAAAAGATCTCTTTTAAATTTGTTATTTACCTATCAACTTT GATCCTTTTTTACGTTACAAAGTATATTTGAGTTATCAAACACATTAGAA ACATTTGCGGGGAAACTTTACGCGCGAAAGTAAGAAAAAGCCGCACTTTA AAACCAACTGTATTCTTCTTTTCATATCTCATCTCGAACCAAACCTTAAA GCTTTGGCGggctttaaattttgaagggttcaCTTTTAAGCTACTGTATG TGATTTTTTCATTGAAGGGGAGAAATCAAAACCTGAACActctaaaaagt taaaacagtgaaacatagaaatttgaatttttttaccgcCCGCATATATT CACAAGCCTTAGATATAAGTAAGAGACGAATGCCAACAAgaaaacttcaa agaaaaatacaTCACAGATAAATATGTCTTTTCAGCGGTATATGCAAAGT CACATAAACCGTGTAACCCTAAAACTACAAAACATTAAGCCTGTGAAAAA AGACCCTCTTGGTCTATATCTTGGAGATTTCTCATCTTGAtaaatgaaag tttttttgtattCGTCCGCGCGCGACAGACAGAAAATTTCAGATATAAAG AGAGAAGGGAGCTTATTTGATTCGCGCAGTCTTGttgtaagaaaaaaagg aaTGTTTTTATTTCGGCATTTgaactttccttttttattAGAAGTCGTAA TCCAATCGGTTGATTGACAGTTTATGACAAGTCGTTTATTGATGTACTGT CTACTACTCAGATAGTTGGCGACTTGGAAGTTAATTATATCCCGCCCATT CTACAGCTCTACTCAGGGGTGTAAATTATCACAGGCCTATTCTAATCATT ATTATTGACAGACTCTATTGTTTAACTGATAAGCCAATAGGAAATAAGAG AAAGAAACAACTGACCAATCAGAGACGAGAGAGTGAGGCGATTAGCCAAT TGATTGGATATCGGTTTTCTATACGAGTTTTGAAGTAATTGACAGAATAC GCGTTCTGGCTCAGCGCATTATGTTTTTTTGTCTATATCGGCTTCCTTTG AAGTGCTATCAAAGTTAATTCGACTTCAGTTGTATGTTTGGGTTTTAGTT ACACCATGACTATCAGCGAAACAAGTCGCTTTTCACCTTCCAACCGAAGT NATTTTGAAGGGTTCACTTTTAAGCTACTGTATGTGATTTTTTCATTGAA GGGGAGAAATCAAAACCTGAACActctaaaaagttaaaacagtgaaacat agaaatttgaatttttttaccgcCCGCATATATTCACAAGCCTTAGATAT AAGTAAGAGACGAATGCCAACAAgaaaacttcaaagaaaaatacaTCACA GATAAATATGTCTTTTCAGCGGTATATGCAAAGTCACATAAACCGTGTAA CCCTAAAACTACAAAACATTAAGCCTGTGAAAAAAGACCCTCTTGGTCTA TATCTTGGAGATTTCTCATCTTGATAaaggaaagttttttttgtattcGT CCGCGCGCGACAGacagaaaattttagaaataaagAGAGAAGGAAAGTTA TTTGATTCGCGCAGTCTTGttgtaagaaaaaaaggaaTGTTTTTATTTCG GCATTTgaactttccttttttattAGAAGTCGTAATCCAATCGGTTGATT GACAGTTTATGACAAGTCGTTTATTGATGTACTGTCTACTACTCAGATAG TTGGCGACTTGGAAGTTAATTATATCCCGCCCATTCTACAGCTCTACTCA GGGGTGTAAATTATCACAGGCCTATTCTAATCATTATTATTGACAGACTC TATTGTTTAACTGATAAGCCAATAGGAAATAAGAGAAAGAAACAACTGAC CAATCAGAGACGAGAGAGTGAGGCGATTAGCCAATTGATTGGATATCGGT TTTCTATACGAGTTTTGAAGTAATTGACAGAATACGCGTTCTGGCTCAGC GCATTATGTTTTTTTGTCTATATCGGCTTCCTTTGAAGTGCTATCAAAGT TAATTCGACTTCAGTTGTATGTTTGGGTTTTAGTTACACCATGACTATCA GCGAAACAAGTCGCTTTTCACCTTCCAACCGAAGTAGTGAAGACAAATCT CAACTCTATAACAAGAAAAACTACTACGATTCTTTTTACAGTGCAAAGAC AAGTTCAAGTATACTGAACAACAATTCAATCGTTGGTATTGATAACAAGA AGATGATTGCACATCAACGTTTACCAGTTCACGTAGAATATTTACAGCCG CACATCACGGTAAGGGATTAGATTTAACGTTTTTAGCCTGGCAAACTACG TCAGGGATACGATAGCAGAGATAGTAGACGCAAACCTAACAAAAAGCAgc tttttccttttcaattatTCTGACTGATTttctaatttgattttttcgtg AGTGCATGAAAGCAATGTTTTCACTTCTTCtctcaaaacaagaaaatttg tttttgtttatgatGTCTAGTTGATCGTTAGGGGGCATCAAATGTTTGAA ATCTAGTTTGTTCCAATCGTTTACAATACACCTGACATTTGTGACCAACT GATTTCCCAAACATGTTTTCCAAATATTATGAAAAGATATGAATAGAAAC TCACAAACATGATACTGCTTTTGCAACAGTTCTGTCCAAACAAATTTATT GAATCTATGTCGTCGAAAATATCACAAGTAAACAGTTTTCATAGCCGGCA ACATATATAGATCACATCTATATACTTTACTTGAGAACTTTCATGCAATA GAACAATCAAGGTTGCCAGGAGAGAGCATCAACTTTCAACACGATTATtt aattttcgaattttcttttcttttggatGCAGACAACGGAATCCAAAGCA TCGCCACTAGCATTGCTAGCAGCAACTTGTAGCAGCATCGGAAAGACAGA CGCCGAAAAGAAAGACTTGAAAACAACAACGACCACACCAACCATTTTGA GCAAATTATCGCCATCACAAGACAATACGAAGAAGTCATCCTTTAAACCG TACAAACTAGACGATAAACGTACACCACCGCCCTCTACAATGCGTTCATC ACCGCCCGTTCTCGTCTCAAATGCAAACATAGTCTCTACAAAAGCGTCCT TACCAAATAGCCCAGTACGTATCACACCAATAAGAGGACCAGCTGAAAAA ACATCCATTATTACACCACCTAGCTCTAAAGACATTGATGAATACGCTAA ATATCAAGAGAAAATGAACAGAGACTTGAAATGTCATTCGGTGTCTCCAC CGTTACCGCATTTCCCTCCGAGGGTTCACATGTTACCACACCACGGACCA AACCATAACCATGCTGATTGTCTACAATGTAAAACAGTAGGTCGACCACC ACACAGCATACACAGCGATCTTCATCCACCACCCGTCCGCCATGGTGCCG CTCCACCACCCTGCGCATGCGCTATGTGTCGCAATGGGGACAGCAAATGT CACATCGGACACTCACCACTACCTGGCATGTACCACCCTCCGCCACACAA AGGAGCTCCACTTCCACCATCCCCCGGTATGCCATGCCGTGATCCAGCAT GTACCAACTGTACTAAACTTCCACCGAAAACCTTACAAAACTTCGTTCAT CCCGCTCTCGTACATCAATGTACGCACAGTTCACCAGCTGGTCCGCATAA GGGACCCTACCCGCCACCTCCACCAAGCGTAGCCGCTTACGATTCTTACT TTCTTAAAAATAGACTTTCACCACACACCAAACCAAAACAACACATCTGT AACTGGGTATTCGAAGGGAAACAGTGCGGGAGCAGTTTTGTAACACCCGA AGAACTCTATCAACACTTACGTACGCACACATCTCTTCAACAACAACGTA ACAACGAGAATGAATCACGTGCGTCAACGGCACTGTCTCCCTTACCACAA ACACACGGACCCATCCCATCACCTCACAACCAACCGGGTGTTTGTAACAT CCACGGGTGCCCGTGTGGTGGAAACCCACGAAAAACACCACCACGTTCAA TTATGCCCGGCTACCCTTACGGCTCTTCCGCACCTTCTGGACTTCGGTAT ACGCCTTACGGGCGACCAGTATCGGCTGGCGGTAATAGCCTACCAGGGCA TTTCGGTTCACACGGAATGTATCATTATTAACGGGAGATAAACATTAAAT TTATTCGGTTTATAAAAGTGTAAAATATTTGTTCATGTCAGGATGTtgta aaaaggaaatttttgttcATAATGTTGTatcatatataaaaatattgtat tAGATTCACCCATACTTtagtatttttgttttaaaaagaaatttttagag aaagaaaaaattcaaggaGAAAATAAATTAA

Coding sequence (CDS) from alignment at scaffold_82:557395..565925+

>TCONS_00072714 ID=TCONS_00072714|Name=TCONS_00072714|organism=Clytia hemisphaerica|type=CDS|length=4293bp|location=Sequence derived from alignment at scaffold_82:557395..565925+ (Clytia hemisphaerica)
ATGCTTGAAGTGATTGCAAAGACAAGTTCAAGTATACTGAACAACAATTC
AATCGTTGGTATTGATAACAAGAAGATGATTGCACATCAACGTTTACCAG
TTCACGTAGAATATTTACAGCCGCACATCACGACAACGGAATCCAAAGCA
TCGCCACTAGCATTGCTAGCAGCAACTTGTAGCAGCATCGGAAAGACAGA
CGCCGAAAAGAAAGACTTGAAAACAACAACGACCACACCAACCATTTTGA
GCAAATTATCGCCATCACAAGACAATACGAAGAAGTCATCCTTTAAACCG
TACAAACTAGACGATAAACGTACACCACCGCCCTCTACAATGCGTTCATC
ACCGCCCGTTCTCGTCTCAAATGCAAACATAGTCTCTACAAAAGCGTCCT
TACCAAATAGCCCAGTACGTATCACACCAATAAGAGGACCAGCTGAAAAA
ACATCCATTATTACACCACCTAGCTCTAAAGACATTGATGAATACGCTAA
ATATCAAGAGAAAATGAACAGAGACTTGAAATGTCATTCGGTGTCTCCAC
CGTTACCGCATTTCCCTCCGAGGGTTCACATGTTACCACACCACGGACCA
AACCATAACCATGCTGATTGTCTACAATGTAAAACAGTAGGTCGACCACC
ACACAGCATACACAGCGATCTTCATCCACCACCCGTCCGCCATGGTGCCG
CTCCACCACCCTGCGCATGCGCTATGTGTCGCAATGGGGACAGCAAATGT
CACATCGGACACTCACCACTACCTGGCATGTACCACCCTCCGCCACACAA
AGGAGCTCCACTTCCACCATCCCCCGGTATGCCATGCCGTGATCCAGCAT
GTACCAACTGTACTAAACTTCCACCGAAAACCTTACAAAACTTCGTTCAT
CCCGCTCTCGTACATCAATGTACGCACAGTTCACCAGCTGGTCCGCATAA
GGGACCCTACCCGCCACCTCCACCAAGCGTAGCCGCTTACGATTCTTACT
TTCTTAAAAATAGACTTTCACCACACACCAAACCAAAACAACACATCTGT
AACTGGGTATTCGAAGGGAAACAGTGCGGGAGCAGTTTTGTAACACCCGA
AGAACTCTATCAACACTTACGTACGCACACATCTCTTCAACAACAACGTA
ACAACGAGAATGAATCACGTGCGTCAACGGCACTGTCTCCCTTACCACAA
ACACACGGACCCATCCCATCACCTCACAACCAACCGGGTGTTTGTAACAT
CCACGGGTGCCCGTGTGGTGGAAACCCACGAAAAACACCACCACGTTCAA
TTATGCCCGGCTACCCTTACGGCTCTTCCGCACCTTCTGGACTTCGGTAT
ACGCCTTACGGGCGACCAGTATCGGCTGGCGGTAATAGCCTACCAGGGCA
TTTCGGTTCACACGGAATGTATCATTATTAAATGCTTGAAGTGATTGCAA
AGACAAGTTCAAGTATACTGAACAACAATTCAATCGTTGGTATTGATAAC
AAGAAGATGATTGCACATCAACGTTTACCAGTTCACGTAGAATATTTACA
GCCGCACATCACGACAACGGAATCCAAAGCATCGCCACTAGCATTGCTAG
CAGCAACTTGTAGCAGCATCGGAAAGACAGACGCCGAAAAGAAAGACTTG
AAAACAACAACGACCACACCAACCATTTTGAGCAAATTATCGCCATCACA
AGACAATACGAAGAAGTCATCCTTTAAACCGTACAAACTAGACGATAAAC
GTACACCACCGCCCTCTACAATGCGTTCATCACCGCCCGTTCTCGTCTCA
AATGCAAACATAGTCTCTACAAAAGCGTCCTTACCAAATAGCCCAGTACG
TATCACACCAATAAGAGGACCAGCTGAAAAAACATCCATTATTACACCAC
CTAGCTCTAAAGACATTGATGAATACGCTAAATATCAAGAGAAAATGAAC
AGAGACTTGAAATGTCATTCGGTGTCTCCACCGTTACCGCATTTCCCTCC
GAGGGTTCACATGTTACCACACCACGGACCAAACCATAACCATGCTGATT
GTCTACAATGTAAAACAGTAGGTCGACCACCACACAGCATACACAGCGAT
CTTCATCCACCACCCGTCCGCCATGGTGCCGCTCCACCACCCTGCGCATG
CGCTATGTGTCGCAATGGGGACAGCAAATGTCACATCGGACACTCACCAC
TACCTGGCATGTACCACCCTCCGCCACACAAAGGAGCTCCACTTCCACCA
TCCCCCGGTATGCCATGCCGTGATCCAGCATGTACCAACTGTACTAAACT
TCCACCGAAAACCTTACAAAACTTCGTTCATCCCGCTCTCGTACATCAAT
GTACGCACAGTTCACCAGCTGGTCCGCATAAGGGACCCTACCCGCCACCT
CCACCAAGCGTAGCCGCTTACGATTCTTACTTTCTTAAAAATAGACTTTC
ACCACACACCAAACCAAAACAACACATCTGTAACTGGGTATTCGAAGGGA
AACAGTGCGGGAGCAGTTTTGTAACACCCGAAGAACTCTATCAACACTTA
CGTACGCACACATCTCTTCAACAACAACGTAACAACGAGAATGAATCACG
TGCGTCAACGGCACTGTCTCCCTTACCACAAACACACGGACCCATCCCAT
CACCTCACAACCAACCGGGTGTTTGTAACATCCACGGGTGCCCGTGTGGT
GGAAACCCACGAAAAACACCACCACGTTCAATTATGCCCGGCTACCCTTA
CGGCTCTTCCGCACCTTCTGGACTTCGGTATACGCCTTACGGGCGACCAG
TATCGGCTGGCGGTAATAGCCTACCAGGGCATTTCGGTTCACACGGAATG
TATCATTATTAAATGCTTGAAGTGATTGCAAAGACAAGTTCAAGTATACT
GAACAACAATTCAATCGTTGGTATTGATAACAAGAAGATGATTGCACATC
AACGTTTACCAGTTCACGTAGAATATTTACAGCCGCACATCACGACAACG
GAATCCAAAGCATCGCCACTAGCATTGCTAGCAGCAACTTGTAGCAGCAT
CGGAAAGACAGACGCCGAAAAGAAAGACTTGAAAACAACAACGACCACAC
CAACCATTTTGAGCAAATTATCGCCATCACAAGACAATACGAAGAAGTCA
TCCTTTAAACCGTACAAACTAGACGATAAACGTACACCACCGCCCTCTAC
AATGCGTTCATCACCGCCCGTTCTCGTCTCAAATGCAAACATAGTCTCTA
CAAAAGCGTCCTTACCAAATAGCCCAGTACGTATCACACCAATAAGAGGA
CCAGCTGAAAAAACATCCATTATTACACCACCTAGCTCTAAAGACATTGA
TGAATACGCTAAATATCAAGAGAAAATGAACAGAGACTTGAAATGTCATT
CGGTGTCTCCACCGTTACCGCATTTCCCTCCGAGGGTTCACATGTTACCA
CACCACGGACCAAACCATAACCATGCTGATTGTCTACAATGTAAAACAGT
AGGTCGACCACCACACAGCATACACAGCGATCTTCATCCACCACCCGTCC
GCCATGGTGCCGCTCCACCACCCTGCGCATGCGCTATGTGTCGCAATGGG
GACAGCAAATGTCACATCGGACACTCACCACTACCTGGCATGTACCACCC
TCCGCCACACAAAGGAGCTCCACTTCCACCATCCCCCGGTATGCCATGCC
GTGATCCAGCATGTACCAACTGTACTAAACTTCCACCGAAAACCTTACAA
AACTTCGTTCATCCCGCTCTCGTACATCAATGTACGCACAGTTCACCAGC
TGGTCCGCATAAGGGACCCTACCCGCCACCTCCACCAAGCGTAGCCGCTT
ACGATTCTTACTTTCTTAAAAATAGACTTTCACCACACACCAAACCAAAA
CAACACATCTGTAACTGGGTATTCGAAGGGAAACAGTGCGGGAGCAGTTT
TGTAACACCCGAAGAACTCTATCAACACTTACGTACGCACACATCTCTTC
AACAACAACGTAACAACGAGAATGAATCACGTGCGTCAACGGCACTGTCT
CCCTTACCACAAACACACGGACCCATCCCATCACCTCACAACCAACCGGG
TGTTTGTAACATCCACGGGTGCCCGTGTGGTGGAAACCCACGAAAAACAC
CACCACGTTCAATTATGCCCGGCTACCCTTACGGCTCTTCCGCACCTTCT
GGACTTCGGTATACGCCTTACGGGCGACCAGTATCGGCTGGCGGTAATAG
CCTACCAGGGCATTTCGGTTCACACGGAATGTATCATTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045134XLOC_045134Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072714-proteinTCONS_00072714-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072714-exon-scaffold_82-1491911889:557395..557502TCONS_00072714-exon-scaffold_82-1491911889:557395..557502Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1510915933:557395..557502TCONS_00072714-exon-scaffold_82-1510915933:557395..557502Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1575043694:557395..557502TCONS_00072714-exon-scaffold_82-1575043694:557395..557502Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1491911889:563736..563853TCONS_00072714-exon-scaffold_82-1491911889:563736..563853Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1510915933:563736..563853TCONS_00072714-exon-scaffold_82-1510915933:563736..563853Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1575043694:563736..563853TCONS_00072714-exon-scaffold_82-1575043694:563736..563853Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1491911889:564427..565925TCONS_00072714-exon-scaffold_82-1491911889:564427..565925Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1510915933:564427..565925TCONS_00072714-exon-scaffold_82-1510915933:564427..565925Clytia hemisphaericaexon
TCONS_00072714-exon-scaffold_82-1575043694:564427..565925TCONS_00072714-exon-scaffold_82-1575043694:564427..565925Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:557395..565925 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0456417 0 0 3.72398 3.44151 6.88998 7.91501 3.98356 5.37397 4.29143 2.44696 27.4395 27.3485 22.8164 52.7786 82.7275 67.9388 15.0506 13.7189 25.8396 30.0964 15.2409 26.6877 31.1561 36.1704 33.4689 20.4793 15.377 16.8576
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072714 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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