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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072713 ID=TCONS_00072713|Name=TCONS_00072713|organism=Clytia hemisphaerica|type=transcript|length=692bp
ACTGTTCAGGGCACTTTAGGAACAAACACCTCTTCTCTTCACCATTAATT
TGACATTTCAAGTTTCTTCAATAAGAAATTGCTATTcgtcttgtttttat
ttatcaattttttttagattagaGCATTACTGAAAAATAGAAGAATATGA
AATTAGATAAAACTAATTCAGGATAAAAAGTGACTGCTTTTGTCGTATTG
AAAAGGTGATATAACATGACATGGATCAAAACAGGATTAAAGAGCTTTAC
AGATGGAAATATTTTATTGCCAGAATGTGCGCAGAAGTACAAATATTTAC
GTGAAAATCTTCATAATAAATTGAATTTAGATTTATTTACATACTattta
caacaacaacaaaaaatacgtcaacgttaaactttttcaaacctcaatta
ATTTAGGGGATTTACATTGTGTACGTTTTTGactttatatatatataaag
aaagtcagcctgtcccaagccaggataaagacagagggacccagagagga
ctaattacccttttattgtaacatcgtctctctaagaggaaaaagaattc
ggccactctttgttgtttgtaggtctgacaggataaaacattttattttt
tcAAAACGTATTTAAGAAGAACAGAATTATAAATAATAaacatttaaata
aaaaatgtcttcatatttttcatattttcataaagGTTGTTG Run BLAST on NCBI transcript from alignment at scaffold_82:523737..524513+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072713 ID=TCONS_00072713|Name=TCONS_00072713|organism=Clytia hemisphaerica|type=transcript|length=777bp|location=Sequence derived from alignment at scaffold_82:523737..524513+ (Clytia hemisphaerica)
ACTGTTCAGGGCACTTTAGGAACAAACACCTCTTCTCTTCACCATTAATT
TGACATTTCAAGTTTCTTCAATAAGAAATTGCTATTcgtcttgtttttat
ttatcaattttttttagattagaGCATTACTGAAAAATAGAAGAATATGA
AATTAGATAAAACTAATTCAGGATAAAAAGTGACTGCTTTTGTCGTATTG
AAAAGGTGATATAACATGACATGGATCAAAACAGGATTAAAGAGCTTTAC
AGATGGAAATATTTTATTGCCAGAATGTGCGCAGAAGTACAAATATTTAC
GTGAAAATCTTCATAATAAATTGAATTTAGATTTATTTACATACTattta
caacaacaacaaaaaatacgtcaacgttaaactttttcaaacctcaatta
ATTTAGGGGATTTACATTGTGTACGTTTTTGactttatatatatataaag
aaagtcagcctgtcccaagccaggataaagacagagggacccagagagga
ctaattacccttttattgtaacatcgtctctctaagaggaaaaagaattc
ggccactctttgttgtttgtaggtctgacaggataaaacattttattttt
tcatattatatGTATATTCTTTTTATAAATTCAGGTCGAAGCACTTAACT
CGAGCACCTTTGTTCCAAAATTTCAAGGTATGAGTACAAAACGTATTTAA
GAAGAACAGAATTATAAATAATAaacatttaaataaaaaatgtcttcata
tttttcatattttcataaagGTTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072713-exon-scaffold_82-1491911889:523737..524338 | TCONS_00072713-exon-scaffold_82-1491911889:523737..524338 | Clytia hemisphaerica | exon |
| TCONS_00072713-exon-scaffold_82-1510915933:523737..524338 | TCONS_00072713-exon-scaffold_82-1510915933:523737..524338 | Clytia hemisphaerica | exon |
| TCONS_00072713-exon-scaffold_82-1575043694:523737..524338 | TCONS_00072713-exon-scaffold_82-1575043694:523737..524338 | Clytia hemisphaerica | exon |
| TCONS_00072713-exon-scaffold_82-1491911889:524424..524513 | TCONS_00072713-exon-scaffold_82-1491911889:524424..524513 | Clytia hemisphaerica | exon |
| TCONS_00072713-exon-scaffold_82-1510915933:524424..524513 | TCONS_00072713-exon-scaffold_82-1510915933:524424..524513 | Clytia hemisphaerica | exon |
| TCONS_00072713-exon-scaffold_82-1575043694:524424..524513 | TCONS_00072713-exon-scaffold_82-1575043694:524424..524513 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_82 | supercontig | scaffold_82:523737..524513 + |
Blast
The following BLAST results are available for this feature:
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