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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072610 ID=TCONS_00072610|Name=TCONS_00072610|organism=Clytia hemisphaerica|type=transcript|length=953bp
GTCGTTTAGTTGAATTTTGAGAGCTGTCGACACAGAAAAAGTAATTGAAC
AGGGACGACGGGTTATTTACCAGCAAAACAACAAAGTTGATTGCCTTCTG
GTTATTAACCCCAAAGTTAGTATGAATCGAAAAACTGGATTACTCATACC
ACCAGCTGTCTTAATAATCGTCCTGTTTTATTTCAATCCGAATTGTATAT
TCACCGACAAAAGCGACACCAGCTACCGACAATCTACCGATGGCGACGAT
TTTAATCCCGACATCCAACAAGTAAACAAACAGGGAACGAAAATTTGGAA
ATCTTCAAATCTATCTTTTGGGACTTTGATACTTAAATGGTTCACAAAAC
AAACTACTAAAAATCCGTCACAACAATCACGAACCCAACTTGGCAATCAC
ACCAAAAAGAACAATACATTATCTTATTCATTATTCGGGAAAAactcttt
ccaaaaatataagcAAAACATTATGAGTGTTTTAACAGAGGCTAGGAAAA
GCTTTTTATATAACTCATGGACGGTCAGAATCTACACAGATATTATCATC
CCGTCAAAATTCGTTAAGAAAATGTATAAACTAAACCCAAAAGTTCGACT
CATTAATATCACCAAACTTAATCACGTACACCCAAACTTGCGGCGCATAA
ACGCTATGATGTTGGTCTTTCTACCCATGGCTGATCTGACGGTATCTGTA
TCGTGTTTCCGTGATTTAGACTCGCCTTTGTATAAACGTGAAGAGCACGC
CGTGCGTGAGTTTTTGTACACGGATTACGTATTCCACGGTATGCGCGACA
ACCCGTACCACTCTTCATTAATCATGGGCGGCATGTGGTGTTTTAAAAAC
GCCAAGAATCCACAATTAAGTCAAATGTTGATCAATTTGATTCTCCAGAA
AGCTAAACGTAGAATTCCGAATGTGAGAGAAGCTCCTAAAGGCGATGACC
AGG Run BLAST on NCBI protein sequence of TCONS_00072610-protein >TCONS_00072610-protein ID=TCONS_00072610-protein|Name=TCONS_00072610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MNRKTGLLIPPAVLIIVLFYFNPNCIFTDKSDTSYRQSTDGDDFNPDIQQ
VNKQGTKIWKSSNLSFGTLILKWFTKQTTKNPSQQSRTQLGNHTKKNNTL
SYSLFGKNSFQKYKQNIMSVLTEARKSFLYNSWTVRIYTDIIIPSKFVKK
MYKLNPKVRLINITKLNHVHPNLRRINAMMLVFLPMADLTVSVSCFRDLD
SPLYKREEHAVREFLYTDYVFHGMRDNPYHSSLIMGGMWCFKNAKNPQLS
QMLINLILQKAKRRIPNVREAPKGDDQ Run BLAST on NCBI transcript from alignment at scaffold_8:407992..408944 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072610 ID=TCONS_00072610|Name=TCONS_00072610|organism=Clytia hemisphaerica|type=transcript|length=953bp|location=Sequence derived from alignment at scaffold_8:407992..408944 (Clytia hemisphaerica)
CCTGGTCATCGCCTTTAGGAGCTTCTCTCACATTCGGAATTCTACGTTTA
GCTTTCTGGAGAATCAAATTGATCAACATTTGACTTAATTGTGGATTCTT
GGCGTTTTTAAAACACCACATGCCGCCCATGATTAATGAAGAGTGGTACG
GGTTGTCGCGCATACCGTGGAATACGTAATCCGTGTACAAAAACTCACGC
ACGGCGTGCTCTTCACGTTTATACAAAGGCGAGTCTAAATCACGGAAACA
CGATACAGATACCGTCAGATCAGCCATGGGTAGAAAGACCAACATCATAG
CGTTTATGCGCCGCAAGTTTGGGTGTACGTGATTAAGTTTGGTGATATTA
ATGAGTCGAACTTTTGGGTTTAGTTTATACATTTTCTTAACGAATTTTGA
CGGGATGATAATATCTGTGTAGATTCTGACCGTCCATGAGTTATATAAAA
AGCTTTTCCTAGCCTCTGTTAAAACACTCATAATGTTTTgcttatatttt
tggaaagagtTTTTCCCGAATAATGAATAAGATAATGTATTGTTCTTTTT
GGTGTGATTGCCAAGTTGGGTTCGTGATTGTTGTGACGGATTTTTAGTAG
TTTGTTTTGTGAACCATTTAAGTATCAAAGTCCCAAAAGATAGATTTGAA
GATTTCCAAATTTTCGTTCCCTGTTTGTTTACTTGTTGGATGTCGGGATT
AAAATCGTCGCCATCGGTAGATTGTCGGTAGCTGGTGTCGCTTTTGTCGG
TGAATATACAATTCGGATTGAAATAAAACAGGACGATTATTAAGACAGCT
GGTGGTATGAGTAATCCAGTTTTTCGATTCATACTAACTTTGGGGTTAAT
AACCAGAAGGCAATCAACTTTGTTGTTTTGCTGGTAAATAACCCGTCGTC
CCTGTTCAATTACTTTTTCTGTGTCGACAGCTCTCAAAATTCAACTAAAC
GAC Coding sequence (CDS) from alignment at scaffold_8:407992..408944 >TCONS_00072610 ID=TCONS_00072610|Name=TCONS_00072610|organism=Clytia hemisphaerica|type=CDS|length=831bp|location=Sequence derived from alignment at scaffold_8:407992..408944 (Clytia hemisphaerica)
CTGGTCATCGCCTTTAGGAGCTTCTCTCACATTCGGAATTCTACGTTTAG
CTTTCTGGAGAATCAAATTGATCAACATTTGACTTAATTGTGGATTCTTG
GCGTTTTTAAAACACCACATGCCGCCCATGATTAATGAAGAGTGGTACGG
GTTGTCGCGCATACCGTGGAATACGTAATCCGTGTACAAAAACTCACGCA
CGGCGTGCTCTTCACGTTTATACAAAGGCGAGTCTAAATCACGGAAACAC
GATACAGATACCGTCAGATCAGCCATGGGTAGAAAGACCAACATCATAGC
GTTTATGCGCCGCAAGTTTGGGTGTACGTGATTAAGTTTGGTGATATTAA
TGAGTCGAACTTTTGGGTTTAGTTTATACATTTTCTTAACGAATTTTGAC
GGGATGATAATATCTGTGTAGATTCTGACCGTCCATGAGTTATATAAAAA
GCTTTTCCTAGCCTCTGTTAAAACACTCATAATGTTTTgcttatattttt
ggaaagagtTTTTCCCGAATAATGAATAAGATAATGTATTGTTCTTTTTG
GTGTGATTGCCAAGTTGGGTTCGTGATTGTTGTGACGGATTTTTAGTAGT
TTGTTTTGTGAACCATTTAAGTATCAAAGTCCCAAAAGATAGATTTGAAG
ATTTCCAAATTTTCGTTCCCTGTTTGTTTACTTGTTGGATGTCGGGATTA
AAATCGTCGCCATCGGTAGATTGTCGGTAGCTGGTGTCGCTTTTGTCGGT
GAATATACAATTCGGATTGAAATAAAACAGGACGATTATTAAGACAGCTG
GTGGTATGAGTAATCCAGTTTTTCGATTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072610-exon-scaffold_8-1491911889:407992..408944 | TCONS_00072610-exon-scaffold_8-1491911889:407992..408944 | Clytia hemisphaerica | exon |
| TCONS_00072610-exon-scaffold_8-1510915933:407992..408944 | TCONS_00072610-exon-scaffold_8-1510915933:407992..408944 | Clytia hemisphaerica | exon |
| TCONS_00072610-exon-scaffold_8-1575043694:407992..408944 | TCONS_00072610-exon-scaffold_8-1575043694:407992..408944 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:407992..408944 . |
Blast
The following BLAST results are available for this feature:
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