TCONS_00072603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072603
Unique NameTCONS_00072603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072603 ID=TCONS_00072603|Name=TCONS_00072603|organism=Clytia hemisphaerica|type=transcript|length=162bp
TTCGATAGCTTCAAGGGCATCATCAATTTTCTCCAAAACTTCTGTGTTAT
GTTTGAACTGATTGAAGTGTCCAGCCTTTGAACAAGTAACATTGTCGCTT
TTTCATTTATTCTCAAGCTTTTCCTTTAATTTTGTTAAGGTATTAGAATT
TGTTACAGAGGT
Run BLAST on NCBI

transcript from alignment at scaffold_8:325078..325239

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072603 ID=TCONS_00072603|Name=TCONS_00072603|organism=Clytia hemisphaerica|type=transcript|length=162bp|location=Sequence derived from alignment at scaffold_8:325078..325239 (Clytia hemisphaerica)
ACCTCTGTAACAAATTCTAATACCTTAACAAAATTAAAGGAAAAGCTTGA
GAATAAATGAAAAAGCGACAATGTTACTTGTTCAAAGGCTGGACACTTCA
ATCAGTTCAAACATAACACAGAAGTTTTGGAGAAAATTGATGATGCCCTT
GAAGCTATCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045063XLOC_045063Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072603-exon-scaffold_8-1491911889:325078..325239TCONS_00072603-exon-scaffold_8-1491911889:325078..325239Clytia hemisphaericaexon
TCONS_00072603-exon-scaffold_8-1510915933:325078..325239TCONS_00072603-exon-scaffold_8-1510915933:325078..325239Clytia hemisphaericaexon
TCONS_00072603-exon-scaffold_8-1575043694:325078..325239TCONS_00072603-exon-scaffold_8-1575043694:325078..325239Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:325078..325239 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top