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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072587 ID=TCONS_00072587|Name=TCONS_00072587|organism=Clytia hemisphaerica|type=transcript|length=1410bp
ATTTTCAGGTCGCTTGATCTTGacatcaacaaaaacaacataaatTATGA
ATTTGGATGTCACGCAAAGTTCATCACGAATCTAATGAACAGGCAAACAA
AATACATCAGATATGAGGCACATGTACTTCAATTCTAGTTTCACTGGTTT
TCGCCAATGAACATACGAACCGCGATATTAACTAAATGGATTGGAAAGAA
ACATCACACTAAGTTAATCAAAAGATACTTATTATACGAACTTATGTCTG
GAACTCATCCACTGAGTGAGATTGGACTTTCTGTTATGTTGTTTTTGCGA
TTAtgattttgtttcaaagtatgtAGTTCTTTCATCAAATTAAGTTCAAA
AAATGGATCAGAGTacctttgttttttcttacaaactagcacgtttcttt
tataagaacccttaaaaaatttgaaggatgttcttaacttaaattttaag
cttaaaaatatctttaacctgttttttttttcaccatcttattttttttg
tgcAAGCTTTCTAAGAAATTTGGGTGtcaataaagccttaaaatgttctt
acttaatcttaaaaatgttttctcaGAAAGCATGGGTTTATAGCTCTGGG
AAAGAGGGACAACTTTggtgtttaaatttttttaatctttatttTTGCTT
TAACTTTGTACTCTATATTTACTGTTGAGATGTTTGTGGTAGATTTCAGA
GCATCAACTATAATCCCAAATTCTTGTCGAAATAGCATTTATTTGCTTCA
CGAGAATTGAATGTTGCTTGGTTTTGTGAGTGGGAAAGCGAGGCAAGGCG
ATAAATGTTGCTTGGATTTGTGTTGGAAAGTGAGGCGAGGCGTTAAATGT
TGCTTGGTTTTGTGGTGTGGGAAGGTGAGGCAAGGCGATAAATGTTGCTT
GGATTTGTGTTGGAAAGTGAGGCAAGGCGTTAAATGTTGCTTGGTTTTGT
ATGTGGGAAAGTGAGGCAAGGCGATAAATGTTGCTTGGATTTGTGTTGAA
AAGTGAGGCAAGGCAATAAATGTTGCTTGGATTTGTGTTGGAAAGTGAGG
CAAGGTGAAAGCGTCGCGGTAAGagtgttaaaaaatattgtgaGTTGAGA
TGCGAACGTGGTGCGAACGTCTTGTGTGCTGGGAAGGTTAAAGTGAGCTT
GAGTGATGCAGTCTCTGTATGTATGCTGTGATAAAGTTGCTTTCAAAACC
AGGTAACATTCAAATCGAAGCAAAGCAAATTAATGTTTTACTCTTTTTTT
ACAATCTAATGATGCTCTTATCTACCACATcctaattttgaatgaaaaac
ccttttatttttcttcttttatttccTAGAAGTCGTTATAATTGAGATTC
AATGTCAACTTTTTCCTTATAGTTCGAGAGCTGTCGGCCTTTTTATTAGG
TCATAAGCCT Run BLAST on NCBI transcript from alignment at scaffold_8:113812..115221 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072587 ID=TCONS_00072587|Name=TCONS_00072587|organism=Clytia hemisphaerica|type=transcript|length=1410bp|location=Sequence derived from alignment at scaffold_8:113812..115221 (Clytia hemisphaerica)
AGGCTTATGACCTAATAAAAAGGCCGACAGCTCTCGAACTATAAGGAAAA
AGTTGACATTGAATCTCAATTATAACGACTTCTAggaaataaaagaagaa
aaataaaagggtttttcattcaaaattaggATGTGGTAGATAAGAGCATC
ATTAGATTGTAAAAAAAGAGTAAAACATTAATTTGCTTTGCTTCGATTTG
AATGTTACCTGGTTTTGAAAGCAACTTTATCACAGCATACATACAGAGAC
TGCATCACTCAAGCTCACTTTAACCTTCCCAGCACACAAGACGTTCGCAC
CACGTTCGCATCTCAACtcacaatattttttaacactCTTACCGCGACGC
TTTCACCTTGCCTCACTTTCCAACACAAATCCAAGCAACATTTATTGCCT
TGCCTCACTTTTCAACACAAATCCAAGCAACATTTATCGCCTTGCCTCAC
TTTCCCACATACAAAACCAAGCAACATTTAACGCCTTGCCTCACTTTCCA
ACACAAATCCAAGCAACATTTATCGCCTTGCCTCACCTTCCCACACCACA
AAACCAAGCAACATTTAACGCCTCGCCTCACTTTCCAACACAAATCCAAG
CAACATTTATCGCCTTGCCTCGCTTTCCCACTCACAAAACCAAGCAACAT
TCAATTCTCGTGAAGCAAATAAATGCTATTTCGACAAGAATTTGGGATTA
TAGTTGATGCTCTGAAATCTACCACAAACATCTCAACAGTAAATATAGAG
TACAAAGTTAAAGCAAaaataaagattaaaaaaatttaaacaccAAAGTT
GTCCCTCTTTCCCAGAGCTATAAACCCATGCTTTCtgagaaaacattttt
aagattaagtaagaacattttaaggctttattgaCACCCAAATTTCTTAG
AAAGCTTgcacaaaaaaaataagatggtgaaaaaaaaaacaggttaaaga
tatttttaagcttaaaatttaagttaagaacatccttcaaattttttaag
ggttcttataaaagaaacgtgctagtttgtaagaaaaaacaaaggtACTC
TGATCCATTTTTTGAACTTAATTTGATGAAAGAACTacatactttgaaac
aaaatcaTAATCGCAAAAACAACATAACAGAAAGTCCAATCTCACTCAGT
GGATGAGTTCCAGACATAAGTTCGTATAATAAGTATCTTTTGATTAACTT
AGTGTGATGTTTCTTTCCAATCCATTTAGTTAATATCGCGGTTCGTATGT
TCATTGGCGAAAACCAGTGAAACTAGAATTGAAGTACATGTGCCTCATAT
CTGATGTATTTTGTTTGCCTGTTCATTAGATTCGTGATGAACTTTGCGTG
ACATCCAAATTCATAatttatgttgtttttgttgatgtCAAGATCAAGCG
ACCTGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072587-exon-scaffold_8-1491911889:113812..115221 | TCONS_00072587-exon-scaffold_8-1491911889:113812..115221 | Clytia hemisphaerica | exon |
| TCONS_00072587-exon-scaffold_8-1510915933:113812..115221 | TCONS_00072587-exon-scaffold_8-1510915933:113812..115221 | Clytia hemisphaerica | exon |
| TCONS_00072587-exon-scaffold_8-1575043694:113812..115221 | TCONS_00072587-exon-scaffold_8-1575043694:113812..115221 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:113812..115221 . |
Blast
The following BLAST results are available for this feature:
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