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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072584 ID=TCONS_00072584|Name=TCONS_00072584|organism=Clytia hemisphaerica|type=transcript|length=1165bp
TGGCACCCTGCCCGTGGCAACCTTGAAAAGGGTACCACAGGgttttaaca
taattttttcttctttttataccgaaaggcaacttttgacaaatgggcta
agaatttatgccatttttgcaaaataacacCCCCCCCTAGTATAACGGGA
ACATCTAAATTCCGTATACTTCCGATTACTATATCAATTATATCTATGGA
TTTAACGCTTAAATCGAAAACCATGATAATCGTCGATTTAAAGTTCGCGC
CTTTGTTGGTTAAACTGTTCAAGTTTTAAAACTCATTGAAACTATTGAGG
CGTTGTGGTTTAGTACTGtagtcattgaccttggttgctacacaggcgac
tgaggttcgattcccactcgacAAGTGAACGTACCTTTGACGAAACTGAT
AAAAACATTGACTTACGACATTAGACGATGTCTTTGCTCTAAGCATTGCT
TCATACTCCTTACAGATAAGGTGTTTGTTTTCTCGTAGCATGATTTCAAT
GGCTACCTAAAGAATGATAGAGAAAACCGTATTTAAGTATTTCCTCTATG
ACAATGATGTCTAGAGATGATAAAAGTCAGCCAAAGCCTTATTTTTGGAA
ACGATAGACGTATCGTAATGGTATTCAGGAACGTTAATTGCGAACACGAA
ATACCATACGATACGAAATATCAACTCGCTATCTTTCTTTATCGAAAACA
GTCATTTAAACTTTTCGCAACTTTCTGAATTTTACCTTTTCAACGAAAGT
AGGCTTTTGATTTTGCGAAACTCCTGCAAAACTATCTGTCCCCTTtctgt
ttatatatttttctttttggacctaccccggtggggtggaggtcctataa
attaacccgtgttcgttagttagtacgttagttaccaatttttttgattt
tttgcacaaaggtgcattactataaaccctcgaatgtgacggagcccgat
tttcgaaaaaaaaatttttccggccggtagaaccggaaATGTCCCGAAAA
AAGtggttttttgagattttctcaagattttatcattagttttttgcgat
tttttgcacatagatgcacattaatactgccgaaaaggtgtcgaaaaccg
tttgccgaaaaaaatttttttccggtctgtagaaccggaaatgtgccgga
aatcgtcgttttttc Run BLAST on NCBI transcript from alignment at scaffold_8:43806..44970 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072584 ID=TCONS_00072584|Name=TCONS_00072584|organism=Clytia hemisphaerica|type=transcript|length=1165bp|location=Sequence derived from alignment at scaffold_8:43806..44970 (Clytia hemisphaerica)
gaaaaaacgacgatttccggcacatttccggttctacagaccggaaaaaa
atttttttcggcaaacggttttcgacaccttttcggcagtattaatgtgc
atctatgtgcaaaaaatcgcaaaaaactaatgataaaatcttgagaaaat
ctcaaaaaaccaCTTTTTTCGGGACATttccggttctaccggccggaaaa
atttttttttcgaaaatcgggctccgtcacattcgagggtttatagtaat
gcacctttgtgcaaaaaatcaaaaaaattggtaactaacgtactaactaa
cgaacacgggttaatttataggacctccaccccaccggggtaggtccaaa
aagaaaaatatataaacagaAAGGGGACAGATAGTTTTGCAGGAGTTTCG
CAAAATCAAAAGCCTACTTTCGTTGAAAAGGTAAAATTCAGAAAGTTGCG
AAAAGTTTAAATGACTGTTTTCGATAAAGAAAGATAGCGAGTTGATATTT
CGTATCGTATGGTATTTCGTGTTCGCAATTAACGTTCCTGAATACCATTA
CGATACGTCTATCGTTTCCAAAAATAAGGCTTTGGCTGACTTTTATCATC
TCTAGACATCATTGTCATAGAGGAAATACTTAAATACGGTTTTCTCTATC
ATTCTTTAGGTAGCCATTGAAATCATGCTACGAGAAAACAAACACCTTAT
CTGTAAGGAGTATGAAGCAATGCTTAGAGCAAAGACATCGTCTAATGTCG
TAAGTCAATGTTTTTATCAGTTTCGTCAAAGGTACGTTCACTTgtcgagt
gggaatcgaacctcagtcgcctgtgtagcaaccaaggtcaatgactaCAG
TACTAAACCACAACGCCTCAATAGTTTCAATGAGTTTTAAAACTTGAACA
GTTTAACCAACAAAGGCGCGAACTTTAAATCGACGATTATCATGGTTTTC
GATTTAAGCGTTAAATCCATAGATATAATTGATATAGTAATCGGAAGTAT
ACGGAATTTAGATGTTCCCGTTATACTAGGGGGGGgtgttattttgcaaa
aatggcataaattcttagcccatttgtcaaaagttgcctttcggtataaa
aagaagaaaaaattatgttaaaacCCTGTGGTACCCTTTTCAAGGTTGCC
ACGGGCAGGGTGCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072584-exon-scaffold_8-1491911889:43806..44970 | TCONS_00072584-exon-scaffold_8-1491911889:43806..44970 | Clytia hemisphaerica | exon |
| TCONS_00072584-exon-scaffold_8-1510915933:43806..44970 | TCONS_00072584-exon-scaffold_8-1510915933:43806..44970 | Clytia hemisphaerica | exon |
| TCONS_00072584-exon-scaffold_8-1575043694:43806..44970 | TCONS_00072584-exon-scaffold_8-1575043694:43806..44970 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:43806..44970 . |
Blast
The following BLAST results are available for this feature:
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