TCONS_00072567 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072567
Unique NameTCONS_00072567
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3832

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072567 ID=TCONS_00072567|Name=TCONS_00072567|organism=Clytia hemisphaerica|type=transcript|length=3832bp
ACGAATTAGACATAAATAGTTTCTTTTCTTGGTTTTTTACTCCCAAAATA
TTTAGTGATTTTAAACTTGTTGTATCAGTAGGGAAGGAACGCAATTTTGA
TTTGCTTGGCTTGGGCGAATTCAAAACAATATCAAACTAGCTGatTCCTG
CACAAAATGGCTACCAACAACAACACGTTCGTGGACCAAGTCATTTCTCT
CTTCACACGTGATATTTATCTCGATCAGCCAAACTTTCGATCACTACTAC
AAGCATTAAATAAGTTGGGTAATCAAGACCTTGTTCTAGCGTATCCAATC
AAGTTGTTAAACAAACGTGCTAAAGAGGATCCAGTGGGTTGGGATACAAT
GTTGTTTGCCTTTAAATGTCCAAATGACGTCACTGCAGATGTGTTGAGCG
CTCAAAATGAAACTGCAAGCAAAGTGCTCGAAGATGATTTGACAGCAATG
AACAAGGAAAAGAAGCTAGATTCAACAAGCGAAGTAAAAAGCAAGAGAAA
GTCTTCGTTGCCAGATAGCACCAACAGTGAAGCCAAGAAAGATGTTTCAA
AACAAACGCCAGCTTTCAAAGATAACAACGAGGTTCTTGAAAGCACAGCT
GAGATGAAGACTGATTCAAACAAATCTCGGAGAAAAAGCTCAGCACAGAT
GACTGAAGAGATTTTGGCAAGTCTGGAAATCCTTGAACAACCTCTGGTTA
TGGATGGTAGCAACAATAGCTGCACCAAACTTATCAGTGATGTGGAAGAG
CTAAAGGTTGCAGTTGAAGAGGAAAGTATTGCTGCCGAAGCTGAGAATGT
ACAGCTTGAACAAGGTGTATCCCTTATTGAGGATACTGCTGACATTGGAT
CAAAGTCAAATCACAATATCAAGAACGCATCTACCAAGGGTGAATCTTCT
TCACCAAAGGAAGATTACCAAAATGACGATGTCGGCGTTATAGCTGATTC
GAAAGACCTTGAAGATCCTAAGGACACTTCTACCAATGAAGAAAATACTG
ATTACAAATCAAAGGCGATGAATAATGACATAGAATCTATGAGTGAGATT
GCTCAAACTGCGATGGCTGGTTGTGAGCTGACAGACACTAACAACTTAGA
GAAACCTAGTGTCCAAACAACCAAATCTGACATCGATTCCACCATAGATG
TTGGAGATGGTCTTTCGATAGCAAATGATCAAATTGATGCCAATGGTAAA
GTAGAGGAAATCGATGATTCATTTGGTGTGCAAAATGATAAAGCTGGTGA
GACTACTAGTCCAATTGCAAACGCCGATGTCAACAACGAAAAAGTCGTAA
AAATTGCTGAGAATGCTGAAGTTGGTGTCTCTACCGGTGACAGAACTTGC
CCCAAGGTATCTGAAAATGTTGATGTCAACCTGTCGGGGGAAGAAACTGA
AATTCTCAAGAACGTTGATGAAGACGAGGATGATTGGTATGGATCACAGT
CTACCAACATCACCAGTGATGACGACAATGATTTGACCGAAGATGGTGGA
TTGCAATTATCATCCTTTGGTGATGACCGTAGACGGAGCAGTAATTTGAA
ATATGCTGGTGTACCCTTGCTGGAGACTATCCAAGAGAATGGAGAACACA
GTGTTTCTAAAGAGAATCTCCAAGTGGAGGATGAGATAGTCAACAGGGAA
TGCAATGAGAATAAGAATGCTGACAATGACACTGTCCATAGAAGAAACAA
TGCACCTAACGAGAATCTTTCAGGTGTTGAGAATGGAAACCAAGGAGAAG
ACAGTGATCGCAAATTTACCAAAGAGAGTATTAACGTTTTGCAAGACCTT
GATCACGAGGAGAAGAATAATATGAAGGCGTTACTTGGTGGTAACAACAG
CTCTGATTATCAGGATGTGACCAAGAAGTCTAGGAATGAATCACTCGATC
AGAACCAAAATGATATCAGTACGATGGAAAACAGTGATGACGACAACAGT
CAAGCAGCAAAGAATGGAAGCATTGAAATCACCAATGTGTCCGGCATTGA
AACCTCCACCAGCAGCAACAGTATCAACATCTATGGTATGGAGACTGATC
AAAATGCTTACAACGACACTTCCTTAACATCAACAACACAGCATCGTGTA
TCGTTTGGTGATTCTGATATCGAagaatttacaaattacattGAATCTGA
ACCGATGATGTACCGTAATTTCTTTTCCTCCACCAGCAGTGGAGTAAACA
GTAATCGAAGCAGTGTATCTTCAGTATCTGATCATCACCATAAGAGCACA
TTGGATCTATCAGCAGATCCAACAACCAAATCGCACCCTTATCATCTTTT
TACCAGGGTTGTCACTGATATGGAGAATGGCTGCTATCCGGAAGATGAAA
ACCTCGAAGAAGACCAGGGCCCATTATCACCCATCAATAAAGAATCCTAT
AACCAGAAAATAATATCATCACCTATAAACTCCCCAATGATGGCACCGCA
CTCGAGCTTCGGCCATTTAGGATCCACAGNTATCATCACCTATAAACTAC
CCAATGATGGCACCGCACTCGAGCTCCGGCCATTTAGGATCCACAGGACG
ACATTACGATTTTGACGAGAGCTTAAATATGGACATTTTTGATATTATCC
ATAAGATGAGACAAAAGACAGGCCGAGTAATTAATAAACAATCAAAAGTG
AACATGCAATATAAAATGACCTCAAGATTAACCTATGACTATTGAATCGT
ATCATTATCATATGGAAAGCCATACCAGAAATGATATTACTACAGTAAAG
CCTTCATAACTCCGAACCCCTTCAATTctaatgtctccttaactcgaaaa
aggaACGAACGATTCTGGACCTTCCGAACAAACCCTTATACAcgttattt
tttattagaagatccaaaacttttgaagcctttggatgttctcaactttt
ttagttttaagcctaaaaatgttcttaacatgttcttacttttgccattt
tttgagtactcTTTGTCCATTTCCctatgaaatttgattttctagagtct
ccaaagccttataatgttcttaacttgttcttaacattttgaccatcgaa
gtcttaagttcttacatagtttattcttataagaaaacgtgtacAAGTTT
CTCTTACTCGAATTTTCAATTCACTTtgcatgttcgagttatggaaactg
TACTGTATTGAGTCTAAGTTGGTATCATCAGCAGACAGAAcagagaacaa
tgtttttgcGTTGAAAGACAACTGAGCCTTGGATTCTCTTTCTTCGTTAA
TTTGGAAAGGATGTATATTATATATATGTtaacacgttactgttccgttt
cgctccggtatgattttcgttacagATCGactgtgttcatattggtttcg
gaacgtgtcagagcaagaaaacggagcgaaaccgtttcgatctgttttgc
tttttaacgtcttcttttttgacttttgacgaattttgacgttcacactt
gtttcggaaccgctTCGTTTCTGAACGGAACGGAACcataacgtctgaac
atggtcttaatcATTTTAGTGTTTGATcaataaaatttggaaaatttgta
aCATGATTATAACTGTCATTGTTCTCCCATTCAAATTGACTCCAAAAATA
ACTTTATAtggaaaactttaaaaaaataatcagtAAAGATGACTTTAAAA
TGATTAATATTGGAAATTCGACAAATTTAAGAACGGAAAATTATAATTGC
TTTAAAAACTTAATTattgatttattaatttattgatTAATTACGCTAGA
TTTGTCTTTTAGCTTTTGTTTGTaccctttttattttttcaagaaagatT
AATTTCAATACTCGAATACAGCTTAAATTGTC
Run BLAST on NCBI

protein sequence of TCONS_00072567-protein

>TCONS_00072567-protein ID=TCONS_00072567-protein|Name=TCONS_00072567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=802bp
MATNNNTFVDQVISLFTRDIYLDQPNFRSLLQALNKLGNQDLVLAYPIKL
LNKRAKEDPVGWDTMLFAFKCPNDVTADVLSAQNETASKVLEDDLTAMNK
EKKLDSTSEVKSKRKSSLPDSTNSEAKKDVSKQTPAFKDNNEVLESTAEM
KTDSNKSRRKSSAQMTEEILASLEILEQPLVMDGSNNSCTKLISDVEELK
VAVEEESIAAEAENVQLEQGVSLIEDTADIGSKSNHNIKNASTKGESSSP
KEDYQNDDVGVIADSKDLEDPKDTSTNEENTDYKSKAMNNDIESMSEIAQ
TAMAGCELTDTNNLEKPSVQTTKSDIDSTIDVGDGLSIANDQIDANGKVE
EIDDSFGVQNDKAGETTSPIANADVNNEKVVKIAENAEVGVSTGDRTCPK
VSENVDVNLSGEETEILKNVDEDEDDWYGSQSTNITSDDDNDLTEDGGLQ
LSSFGDDRRRSSNLKYAGVPLLETIQENGEHSVSKENLQVEDEIVNRECN
ENKNADNDTVHRRNNAPNENLSGVENGNQGEDSDRKFTKESINVLQDLDH
EEKNNMKALLGGNNSSDYQDVTKKSRNESLDQNQNDISTMENSDDDNSQA
AKNGSIEITNVSGIETSTSSNSINIYGMETDQNAYNDTSLTSTTQHRVSF
GDSDIEEFTNYIESEPMMYRNFFSSTSSGVNSNRSSVSSVSDHHHKSTLD
LSADPTTKSHPYHLFTRVVTDMENGCYPEDENLEEDQGPLSPINKESYNQ
KIISSPINSPMMAPHSSFGHLGSTXIITYKLPNDGTALELRPFRIHRTTL
RF
Run BLAST on NCBI

transcript from alignment at scaffold_8:400063..405227-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072567 ID=TCONS_00072567|Name=TCONS_00072567|organism=Clytia hemisphaerica|type=transcript|length=5165bp|location=Sequence derived from alignment at scaffold_8:400063..405227- (Clytia hemisphaerica)
ACGAATTAGACATAAATAGTTTCTTTTCTTGGTTTTTTACTCCCAAAATA
TTTAGTGATTTTAAACTTGTTGTATCAGTAGGGAAGGAACGCAATTTTGA
TTTGCTTGGCTTGGGCGAATTCAAAACAATATCAAACTAGCTGGTAAGTA
ATATCAATTTGAATTAGGTAATTACTTTTGTACTCTTAGCGTCCATTCGC
CCATTGGGTGAGTGATATAGCTGCATTTCTGAGAAAGCGCGCGGCGAATT
TACAAATAAGACTTGTTTAGCCAATCCAAAAATCTATTGTTCAGAGCTGA
AAACTTTCAGCCGAAAGGACTTTGTTTTTTACTCTGAATTCAATGCACTT
TCTAACCTTTCTAATCAAGCAAAGTCTGGATTGTGAGTTGTCTATTTAAA
AGTTTCTAACCTAGAAAAATCAATCAAGCTCTTCACAATTTCATATTTTA
AAACGTTGTTTTGTTTTTATAGATTCCTGCACAAAATGGCTACCAACAAC
AACACGTTCGTGGACCAAGTCATTTCTCTCTTCACACGTGATATTTATCT
CGATCAGCCAAACTTTCGATCACTACTACAAGCATTAAATAAGTTGGGTA
ATCAAGACCTTGTTCTAGCGTATCCAATCAAGTTGTTAAACAAACGTGCT
AAAGAGGATCCAGTGGGTTGGGATACAATGTTGTTTGCCTTTAAATGTCC
AAATGACGTCACTGCAGATGTGTTGAGCGCTCAAAATGAAACTGCAAGCA
AAGTGCTCGGTAAGTCGTCATTTCATATTTTGTTAGTTTGCCAACATAGA
AGAACATTTTCGAATCCGTAAAGGTTTGCTTCCATAATGGCGGAAGCCAC
GTAAGTTAACAAAACATGAAAAAAGTCTTGCGTTTCAGTTGATATCACCA
AGGATAATTTTTTCAGTTATAATTTTATTTGAAGGTTTTAAAGATGAGGT
CTACATCATTTCATAAGTGACGGGAGTCAGAGGTAATCTGAACCACCGCG
CTATGATAACAATTTTCTATTGACCTAAGATTATTGGATGTTTTCGCTTT
TAACCAACGGGAAGATGTTTTAGAAGGACTGAGGCGTTATCAGTCCTGAT
TACTCATGATTCATTTCGACCGTGAAACATAGATTTATAAAGCCTGAAGG
GCTAGATGTCGTGCTATGGCTGAAAAGTGTGCGGAGGTTAAGTAGGAAAT
CCTACCTAGGCCACGTGACATTACAATAGAATTTCAGCGCTTGACCAATA
AGAAGCTTCGCGGGATATTTTTTGCGATATATTAACTTTTTTTTGCTTGG
AAGAGCTTAGAGCACGACATCAAGCCATTCGGGCTTTAAAGAAATCTGTG
CCATGAAATGCCCTCTTAAAGGAGGAGATTAAGGGGGAGTGAGGACAGTT
TGGGGCAAGTGACGAAGGTTTTCCTGGTCAAACACATTTCTAATCAACTT
CAAGCAGGGATCTATGATAGAGATTTTTTACAAAAGTGACAAAGATTTGT
CCTACTTTAATTTTACTCGACTAAGTTCTCCCCGTTAAAATATTGGGGAT
CTCCACACAACAGACATGCCACAACCAGCACTAAAAGTTTTCTTGAAACA
GTGCTCTCAAAAACTAGGGATTGTAACCGCCTCGTATGACCAATTTATTT
GATAAAGTTGGCTACATACTCTATTTAGTTATCTTGCTGGGATTTCACGT
GTTGATCGTCTAAGATAAGATTTGAATCAGCGATCAATGGTTGAATGGCA
TTTTCTTTTATAGAAGATGATTTGACAGCAATGAACAAGGAAAAGAAGCT
AGATTCAACAAGCGAAGTAAAAAGCAAGAGAAAGTCTTCGTTGCCAGATA
GCACCAACAGTGAAGCCAAGAAAGATGTTTCAAAACAAACGCCAGCTTTC
AAAGATAACAACGAGGTTCTTGAAAGCACAGCTGAGATGAAGACTGATTC
AAACAAATCTCGGAGAAAAAGCTCAGCACAGATGACTGAAGAGATTTTGG
CAAGTCTGGAAATCCTTGAACAACCTCTGGTTATGGATGGTAGCAACAAT
AGCTGCACCAAACTTATCAGTGATGTGGAAGAGCTAAAGGTTGCAGTTGA
AGAGGAAAGTATTGCTGCCGAAGCTGAGAATGTACAGCTTGAACAAGGTG
TATCCCTTATTGAGGATACTGCTGACATTGGATCAAAGTCAAATCACAAT
ATCAAGAACGCATCTACCAAGGGTGAATCTTCTTCACCAAAGGAAGATTA
CCAAAATGACGATGTCGGCGTTATAGCTGATTCGAAAGACCTTGAAGATC
CTAAGGACACTTCTACCAATGAAGAAAATACTGATTACAAATCAAAGGCG
ATGAATAATGACATAGAATCTATGAGTGAGATTGCTCAAACTGCGATGGC
TGGTTGTGAGCTGACAGACACTAACAACTTAGAGAAACCTAGTGTCCAAA
CAACCAAATCTGACATCGATTCCACCATAGATGTTGGAGATGGTCTTTCG
ATAGCAAATGATCAAATTGATGCCAATGGTAAAGTAGAGGAAATCGATGA
TTCATTTGGTGTGCAAAATGATAAAGCTGGTGAGACTACTAGTCCAATTG
CAAACGCCGATGTCAACAACGAAAAAGTCGTAAAAATTGCTGAGAATGCT
GAAGTTGGTGTCTCTACCGGTGACAGAACTTGCCCCAAGGTATCTGAAAA
TGTTGATGTCAACCTGTCGGGGGAAGAAACTGAAATTCTCAAGAACGTTG
ATGAAGACGAGGATGATTGGTATGGATCACAGTCTACCAACATCACCAGT
GATGACGACAATGATTTGACCGAAGATGGTGGATTGCAATTATCATCCTT
TGGTGATGACCGTAGACGGAGCAGTAATTTGAAATATGCTGGTGTACCCT
TGCTGGAGACTATCCAAGAGAATGGAGAACACAGTGTTTCTAAAGAGAAT
CTCCAAGTGGAGGATGAGATAGTCAACAGGGAATGCAATGAGAATAAGAA
TGCTGACAATGACACTGTCCATAGAAGAAACAATGCACCTAACGAGAATC
TTTCAGGTGTTGAGAATGGAAACCAAGGAGAAGACAGTGATCGCAAATTT
ACCAAAGAGAGTATTAACGTTTTGCAAGACCTTGATCACGAGGAGAAGAA
TAATATGAAGGCGTTACTTGGTGGTAACAACAGCTCTGATTATCAGGATG
TGACCAAGAAGTCTAGGAATGAATCACTCGATCAGAACCAAAATGATATC
AGTACGATGGAAAACAGTGATGACGACAACAGTCAAGCAGCAAAGAATGG
AAGCATTGAAATCACCAATGTGTCCGGCATTGAAACCTCCACCAGCAGCA
ACAGTATCAACATCTATGGTATGGAGACTGATCAAAATGCTTACAACGAC
ACTTCCTTAACATCAACAACACAGCATCGTGTATCGTTTGGTGATTCTGA
TATCGAAGAATTTACAAATTACATTGAATCTGAACCGATGATGTACCGTA
ATTTCTTTTCCTCCACCAGCAGTGGAGTAAACAGTAATCGAAGCAGTGTA
TCTTCAGTATCTGATCATCACCATAAGAGCACATTGGATCTATCAGCAGA
TCCAACAACCAAATCGCACCCTTATCATCTTTTTACCAGGGTTGTCACTG
ATATGGAGAATGGCTGCTATCCGGAAGATGAAAACCTCGAAGAAGACCAG
GGCCCATTATCACCCATCAATAAAGAATCCTATAACCAGAAAATAATATC
ATCACCTATAAACTCCCCAATGATGGCACCGCACTCGAGCTTCGGCCATT
TAGGATCCACAGNTATCATCACCTATAAACTACCCAATGATGGCACCGCA
CTCGAGCTCCGGCCATTTAGGATCCACAGGACGACATTACGATTTTGACG
AGAGCTTAAATATGGACATTTTTGATATTATCCATAAGATGAGACAAAAG
ACAGGCCGAGTAATTAATAAACAATCAAAAGTGAACATGCAATATAAAAT
GACCTCAAGATTAACCTATGACTATTGAATCGTATCATTATCATATGGAA
AGCCATACCAGAAATGATATTACTACAGTAAAGCCTTCATAACTCCGAAC
CCCTTCAATTCTAATGTCTCCTTAACTCGAAAAAGGAACGAACGATTCTG
GACCTTCCGAACAAACCCTTATACACGTTATTTTTTATTAGAAGATCCAA
AACTTTTGAAGCCTTTGGATGTTCTCAACTTTTTTAGTTTTAAGCCTAAA
AATGTTCTTAACATGTTCTTACTTTTGCCATTTTTTGAGTACTCTTTGTC
CATTTCCCTATGAAATTTGATTTTCTAGAGTCTCCAAAGCCTTATAATGT
TCTTAACTTGTTCTTAACATTTTGACCATCGAAGTCTTAAGTTCTTACAT
AGTTTATTCTTATAAGAAAACGTGTACAAGTTTCTCTTACTCGAATTTTC
AATTCACTTTGCATGTTCGAGTTATGGAAACTGTACTGTATTGAGTCTAA
GTTGGTATCATCAGCAGACAGAACAGAGAACAATGTTTTTGCGTTGAAAG
ACAACTGAGCCTTGGATTCTCTTTCTTCGTTAATTTGGAAAGGATGTATA
TTATATATATGTTAACACGTTACTGTTCCGTTTCGCTCCGGTATGATTTT
CGTTACAGATCGACTGTGTTCATATTGGTTTCGGAACGTGTCAGAGCAAG
AAAACGGAGCGAAACCGTTTCGATCTGTTTTGCTTTTTAACGTCTTCTTT
TTTGACTTTTGACGAATTTTGACGTTCACACTTGTTTCGGAACCGCTTCG
TTTCTGAACGGAACGGAACCATAACGTCTGAACATGGTCTTAATCATTTT
AGTGTTTGATCAATAAAATTTGGAAAATTTGTAACATGATTATAACTGTC
ATTGTTCTCCCATTCAAATTGACTCCAAAAATAACTTTATATGGAAAACT
TTAAAAAAATAATCAGTAAAGATGACTTTAAAATGATTAATATTGGAAAT
TCGACAAATTTAAGAACGGAAAATTATAATTGCTTTAAAAACTTAATTAT
TGATTTATTAATTTATTGATTAATTACGCTAGATTTGTCTTTTAGCTTTT
GTTTGTACCCTTTTTATTTTTTCAAGAAAGATTAATTTCAATACTCGAAT
ACAGCTTAAATTGTC

Coding sequence (CDS) from alignment at scaffold_8:400063..405227-

>TCONS_00072567 ID=TCONS_00072567|Name=TCONS_00072567|organism=Clytia hemisphaerica|type=CDS|length=4818bp|location=Sequence derived from alignment at scaffold_8:400063..405227- (Clytia hemisphaerica)
AAGATGATTTGACAGCAATGAACAAGGAAAAGAAGCTAGATTCAACAAGC
GAAGTAAAAAGCAAGAGAAAGTCTTCGTTGCCAGATAGCACCAACAGTGA
AGCCAAGAAAGATGTTTCAAAACAAACGCCAGCTTTCAAAGATAACAACG
AGGTTCTTGAAAGCACAGCTGAGATGAAGACTGATTCAAACAAATCTCGG
AGAAAAAGCTCAGCACAGATGACTGAAGAGATTTTGGCAAGTCTGGAAAT
CCTTGAACAACCTCTGGTTATGGATGGTAGCAACAATAGCTGCACCAAAC
TTATCAGTGATGTGGAAGAGCTAAAGGTTGCAGTTGAAGAGGAAAGTATT
GCTGCCGAAGCTGAGAATGTACAGCTTGAACAAGGTGTATCCCTTATTGA
GGATACTGCTGACATTGGATCAAAGTCAAATCACAATATCAAGAACGCAT
CTACCAAGGGTGAATCTTCTTCACCAAAGGAAGATTACCAAAATGACGAT
GTCGGCGTTATAGCTGATTCGAAAGACCTTGAAGATCCTAAGGACACTTC
TACCAATGAAGAAAATACTGATTACAAATCAAAGGCGATGAATAATGACA
TAGAATCTATGAGTGAGATTGCTCAAACTGCGATGGCTGGTTGTGAGCTG
ACAGACACTAACAACTTAGAGAAACCTAGTGTCCAAACAACCAAATCTGA
CATCGATTCCACCATAGATGTTGGAGATGGTCTTTCGATAGCAAATGATC
AAATTGATGCCAATGGTAAAGTAGAGGAAATCGATGATTCATTTGGTGTG
CAAAATGATAAAGCTGGTGAGACTACTAGTCCAATTGCAAACGCCGATGT
CAACAACGAAAAAGTCGTAAAAATTGCTGAGAATGCTGAAGTTGGTGTCT
CTACCGGTGACAGAACTTGCCCCAAGGTATCTGAAAATGTTGATGTCAAC
CTGTCGGGGGAAGAAACTGAAATTCTCAAGAACGTTGATGAAGACGAGGA
TGATTGGTATGGATCACAGTCTACCAACATCACCAGTGATGACGACAATG
ATTTGACCGAAGATGGTGGATTGCAATTATCATCCTTTGGTGATGACCGT
AGACGGAGCAGTAATTTGAAATATGCTGGTGTACCCTTGCTGGAGACTAT
CCAAGAGAATGGAGAACACAGTGTTTCTAAAGAGAATCTCCAAGTGGAGG
ATGAGATAGTCAACAGGGAATGCAATGAGAATAAGAATGCTGACAATGAC
ACTGTCCATAGAAGAAACAATGCACCTAACGAGAATCTTTCAGGTGTTGA
GAATGGAAACCAAGGAGAAGACAGTGATCGCAAATTTACCAAAGAGAGTA
TTAACGTTTTGCAAGACCTTGATCACGAGGAGAAGAATAATATGAAGGCG
TTACTTGGTGGTAACAACAGCTCTGATTATCAGGATGTGACCAAGAAGTC
TAGGAATGAATCACTCGATCAGAACCAAAATGATATCAGTACGATGGAAA
ACAGTGATGACGACAACAGTCAAGCAGCAAAGAATGGAAGCATTGAAATC
ACCAATGTGTCCGGCATTGAAACCTCCACCAGCAGCAACAGTATCAACAT
CTATGGTATGGAGACTGATCAAAATGCTTACAACGACACTTCCTTAACAT
CAACAACACAGCATCGTGTATCGTTTGGTGATTCTGATATCGAAGAATTT
ACAAATTACATTGAATCTGAACCGATGATGTACCGTAATTTCTTTTCCTC
CACCAGCAGTGGAGTAAACAGTAATCGAAGCAGTGTATCTTCAGTATCTG
ATCATCACCATAAGAGCACATTGGATCTATCAGCAGATCCAACAACCAAA
TCGCACCCTTATCATCTTTTTACCAGGGTTGTCACTGATATGGAGAATGG
CTGCTATCCGGAAGATGAAAACCTCGAAGAAGACCAGGGCCCATTATCAC
CCATCAATAAAGAATCCTATAACCAGAAAATAATATCATCACCTATAAAC
TCCCCAATGATGGCACCGCACTCGAGCTTCGGCCATTTAGGATCCACAGN
TATCATCACCTATAAACTACCCAATGATGGCACCGCACTCGAGCTCCGGC
CATTTAGGATCCACAGGACGACATTACGATTTTGAATGGCTACCAACAAC
AACACGTTCGTGGACCAAGTCATTTCTCTCTTCACACGTGATATTTATCT
CGATCAGCCAAACTTTCGATCACTACTACAAGCATTAAATAAGTTGGGTA
ATCAAGACCTTGTTCTAGCGTATCCAATCAAGTTGTTAAACAAACGTGCT
AAAGAGGATCCAGTGGGTTGGGATACAATGTTGTTTGCCTTTAAATGTCC
AAATGACGTCACTGCAGATGTGTTGAGCGCTCAAAATGAAACTGCAAGCA
AAGTGCTCGAAGATGATTTGACAGCAATGAACAAGGAAAAGAAGCTAGAT
TCAACAAGCGAAGTAAAAAGCAAGAGAAAGTCTTCGTTGCCAGATAGCAC
CAACAGTGAAGCCAAGAAAGATGTTTCAAAACAAACGCCAGCTTTCAAAG
ATAACAACGAGGTTCTTGAAAGCACAGCTGAGATGAAGACTGATTCAAAC
AAATCTCGGAGAAAAAGCTCAGCACAGATGACTGAAGAGATTTTGGCAAG
TCTGGAAATCCTTGAACAACCTCTGGTTATGGATGGTAGCAACAATAGCT
GCACCAAACTTATCAGTGATGTGGAAGAGCTAAAGGTTGCAGTTGAAGAG
GAAAGTATTGCTGCCGAAGCTGAGAATGTACAGCTTGAACAAGGTGTATC
CCTTATTGAGGATACTGCTGACATTGGATCAAAGTCAAATCACAATATCA
AGAACGCATCTACCAAGGGTGAATCTTCTTCACCAAAGGAAGATTACCAA
AATGACGATGTCGGCGTTATAGCTGATTCGAAAGACCTTGAAGATCCTAA
GGACACTTCTACCAATGAAGAAAATACTGATTACAAATCAAAGGCGATGA
ATAATGACATAGAATCTATGAGTGAGATTGCTCAAACTGCGATGGCTGGT
TGTGAGCTGACAGACACTAACAACTTAGAGAAACCTAGTGTCCAAACAAC
CAAATCTGACATCGATTCCACCATAGATGTTGGAGATGGTCTTTCGATAG
CAAATGATCAAATTGATGCCAATGGTAAAGTAGAGGAAATCGATGATTCA
TTTGGTGTGCAAAATGATAAAGCTGGTGAGACTACTAGTCCAATTGCAAA
CGCCGATGTCAACAACGAAAAAGTCGTAAAAATTGCTGAGAATGCTGAAG
TTGGTGTCTCTACCGGTGACAGAACTTGCCCCAAGGTATCTGAAAATGTT
GATGTCAACCTGTCGGGGGAAGAAACTGAAATTCTCAAGAACGTTGATGA
AGACGAGGATGATTGGTATGGATCACAGTCTACCAACATCACCAGTGATG
ACGACAATGATTTGACCGAAGATGGTGGATTGCAATTATCATCCTTTGGT
GATGACCGTAGACGGAGCAGTAATTTGAAATATGCTGGTGTACCCTTGCT
GGAGACTATCCAAGAGAATGGAGAACACAGTGTTTCTAAAGAGAATCTCC
AAGTGGAGGATGAGATAGTCAACAGGGAATGCAATGAGAATAAGAATGCT
GACAATGACACTGTCCATAGAAGAAACAATGCACCTAACGAGAATCTTTC
AGGTGTTGAGAATGGAAACCAAGGAGAAGACAGTGATCGCAAATTTACCA
AAGAGAGTATTAACGTTTTGCAAGACCTTGATCACGAGGAGAAGAATAAT
ATGAAGGCGTTACTTGGTGGTAACAACAGCTCTGATTATCAGGATGTGAC
CAAGAAGTCTAGGAATGAATCACTCGATCAGAACCAAAATGATATCAGTA
CGATGGAAAACAGTGATGACGACAACAGTCAAGCAGCAAAGAATGGAAGC
ATTGAAATCACCAATGTGTCCGGCATTGAAACCTCCACCAGCAGCAACAG
TATCAACATCTATGGTATGGAGACTGATCAAAATGCTTACAACGACACTT
CCTTAACATCAACAACACAGCATCGTGTATCGTTTGGTGATTCTGATATC
GAAGAATTTACAAATTACATTGAATCTGAACCGATGATGTACCGTAATTT
CTTTTCCTCCACCAGCAGTGGAGTAAACAGTAATCGAAGCAGTGTATCTT
CAGTATCTGATCATCACCATAAGAGCACATTGGATCTATCAGCAGATCCA
ACAACCAAATCGCACCCTTATCATCTTTTTACCAGGGTTGTCACTGATAT
GGAGAATGGCTGCTATCCGGAAGATGAAAACCTCGAAGAAGACCAGGGCC
CATTATCACCCATCAATAAAGAATCCTATAACCAGAAAATAATATCATCA
CCTATAAACTCCCCAATGATGGCACCGCACTCGAGCTTCGGCCATTTAGG
ATCCACAGNTATCATCACCTATAAACTACCCAATGATGGCACCGCACTCG
AGCTCCGGCCATTTAGGATCCACAGGACGACATTACGATTTTGAATGGCT
ACCAACAACAACACGTTCGTGGACCAAGTCATTTCTCTCTTCACACGTGA
TATTTATCTCGATCAGCCAAACTTTCGATCACTACTACAAGCATTAAATA
AGTTGGGTAATCAAGACCTTGTTCTAGCGTATCCAATCAAGTTGTTAAAC
AAACGTGCTAAAGAGGATCCAGTGGGTTGGGATACAATGTTGTTTGCCTT
TAAATGTCCAAATGACGTCACTGCAGATGTGTTGAGCGCTCAAAATGAAA
CTGCAAGCAAAGTGCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045035XLOC_045035Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072567-proteinTCONS_00072567-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072567-exon-scaffold_8-1575043694:405085..405227TCONS_00072567-exon-scaffold_8-1575043694:405085..405227Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1575043694:404469..404755TCONS_00072567-exon-scaffold_8-1575043694:404469..404755Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1575043694:400063..403464TCONS_00072567-exon-scaffold_8-1575043694:400063..403464Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1510915933:405085..405227TCONS_00072567-exon-scaffold_8-1510915933:405085..405227Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1510915933:404469..404755TCONS_00072567-exon-scaffold_8-1510915933:404469..404755Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1510915933:400063..403464TCONS_00072567-exon-scaffold_8-1510915933:400063..403464Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1491911889:405085..405227TCONS_00072567-exon-scaffold_8-1491911889:405085..405227Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1491911889:404469..404755TCONS_00072567-exon-scaffold_8-1491911889:404469..404755Clytia hemisphaericaexon
TCONS_00072567-exon-scaffold_8-1491911889:400063..403464TCONS_00072567-exon-scaffold_8-1491911889:400063..403464Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:400063..405227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0.0685951 tpm) - - (61.0213 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.134294	0.128937	0.0685951	0.278875	0.438097	0.435458	0.650599	0.450299	0.43648	0.435959	0.676298	0.699166	0.526672	0.565134	0.237103	0.321042	0.280101	0.286413	0.498361	0.590585	0.619542	0.64647	21.4128	20.7665	48.1555	61.0213	0.540518	0.267847	0.296525	0.223537
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072567 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
500100015002000250030003500Sequence
Match NameE-valueIdentityDescription
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