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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072552 ID=TCONS_00072552|Name=TCONS_00072552|organism=Clytia hemisphaerica|type=transcript|length=1392bp
CTAAaccctttttttttataagaataacttctatagttatatcagggtga
gatttaaAAGTTAGAGCCATAGGcatattgtttagaacaatagaaaaata
ataatgctcacccttagccaaagtacactattcttataaaaaaagcgtgt
attctgGTGTAACATATACATCATTGTGTTGGAAAGTCATTTTAAATGGA
TTGTTTTCATATTAGTGTTTTTGTTGTTTGACCGTTAAAGAAATAATTTG
CTGAGTAAAGTtgttttggtttgaaaaatcctgCTAACGTGTTAATTCTT
TGTCTTTTTCTCGGTTTCCGCTTTCttactgtacacgtttttttttaata
agaatacactttataagaatgtccataatgaaaatggccaaaaaactaag
aatatgctaagaatatcactatcatgaaattttgctactaaagctaagaT
GTAAGAATACAATTTTAAGAGCATTTCAAtgataaattatcaattatccc
caagttaggctcactccttttacaaaagtgccattttatgcttgagacgt
atttacaaaatctagtatgaattaggatcctaacctaagaaagtgctgta
agaatattttaggataattttcccaaaaaagttaagaatatccatgatga
aatagatttacaccattcttataaaaaaaagcgtgtatcccTTTCGATGT
TGGAAAGTAAGATCTGACGCACTTTTATTGTCCAAATTCAGAAATTCACG
TTTGTAAACTTTTCTGTTACAAGGTCATTAATATTAGGGCTCACGAAACT
GACGTGTTTTTGTTGCTGTTTTGTCGGATTTTCAACGGAAGTGATGTAGG
GGTTTTGTTGAGATGATGGAGATGAAGGAAAGCATGATATAAATGTTTTC
GATGTCAAGAATGGCATTTTTTCCATGTATTGAAAAtgttgtaatatttt
ttgtctACCTTACAGAGCACGTCTCTCCATAATCGTTCAATGCGAACATT
ATGAACGAACTTTCCAAGGATAAAGGCGTTGTGGCCAGACAAATTCAAGG
ACTCCATCAAAGATTTGGGTTGCACAAATTCGTCACCATGATCTGCTCTT
ACGCAAATTGGAACACTCGACACTTTCACGCCTTCAATGAAGTCACACAC
CATCGTTTTAGCCAGATTATTTGTATGTACTTTCAAAATGAATAATGAAT
CGACTAAAATCATCAATACAACTGTATGACAAAGTTGGCTACCTTCCTTC
TTCGGGGAGCTTTAGGTGCTTCAGCCGTTTGTTTCTTCAATAAAGTCACA
CACCCTCGTTTTAGCCAGATTATTTGTATGTACTTTCAAACAAATAATGA
ATCGACTGAAATCATCAATACAACTGTGTATGACAAAGTTGG Run BLAST on NCBI transcript from alignment at scaffold_8:26565..29031- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072552 ID=TCONS_00072552|Name=TCONS_00072552|organism=Clytia hemisphaerica|type=transcript|length=2467bp|location=Sequence derived from alignment at scaffold_8:26565..29031- (Clytia hemisphaerica)
CTAAACCCTTTTTTTTTATAAGAATAACTTCTATAGTTATATCAGGGTGA
GATTTAAAAGTTAGAGCCATAGGCATATTGTTTAGAACAATAGAAAAATA
ATAATGCTCACCCTTAGCCAAAGTACACTATTCTTATAAAAAAAGCGTGT
ATTCTGGTGTAACATATACATCATTGTGTTGGAAAGTCATTTTAAATGGA
TTGTTTTCATATTAGTGTTTTTGTTGTTTGACCGTTAAAGAAATAATTTG
CTGAGTAAAGTTGTTTTGGTTTGAAAAATCCTGCTAACGTGTTAATTCTT
TGTCTTTTTCTCGGTTTCCGCTTTCTTACTGTACACGTTTTTTTTTAATA
AGAATACACTTTATAAGAATGTCCATAATGAAAATGGCCAAAAAACTAAG
AATATGCTAAGAATATCACTATCATGAAATTTTGCTACTAAAGCTAAGAT
GTAAGAATACAATTTTAAGAGCATTTCAATGATAAATTATCAATTATCCC
CAAGTTAGGCTCACTCCTTTTACAAAAGTGCCATTTTATGCTTGAGACGT
ATTTACAAAATCTAGTATGAATTAGGATCCTAACCTAAGAAAGTGCTGTA
AGAATATTTTAGGATAATTTTCCCAAAAAAGTTAAGAATATCCATGATGA
AATAGATTTACACCATTCTTATAAAAAAAAGCGTGTATCCCTTTCGATGT
TGGAAAGTAAGATCTGACGCACTTTTATTGTCCAAATTCAGAAATTCACG
TTTGTAAACTTTTCTGTTACAAGGTCATTAATATTAGGGCTCACGAAACT
GACGTGTTTTTGTTGCTGTTTTGTCGGATTTTCAACGGAAGTGATGTAGG
GGTTTTGTTGAGATGATGGAGATGAAGGAAAGCATGATATAAATGTTTTC
GATGTCAAGAATGGCATTTTTTCCATGTATTGAAAATGTTGTAATATTTT
TTGTCTACCTTACAGAGCACGTCTCTCCATAATCGTTCAATGCGAACATT
ATGAACGAACATGGTCAAAAATACCCCCTGTTTTTGTGACATTTTGTATA
TGATATCTTTAACCAAAGGTTTTTAGGTGATATAATGTGGCTGACACTAA
GTTTATATATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGAACTTTTCAAACTACTACAAGCCTAGGTTA
AGCTTTGAACTTGAAGTGTGTAAATTTTCAGCTGTCAAAACAAATGTCAG
CCACATTTATCACCTGAAGTGTAAAATAATTGAAATATTGTCAATTTTCA
AATGTCACACTATTTTTGACCATGATCGAACGGACTTTCCAAGGATAAAG
GCGTTGTGGCCAGACAAATTCAAGGACTCCATCAAAGATTTGGGTTGCAC
AAATTCGTCACCATGATCTGCTCTTACGCAAATTGGAACACTCGACACTT
TCACGCCTTCAATGAAGTCACACACCATCGTTTTAGCCAGATTATTTGTA
TGTACTTTCAAAATGAATAATGAATCGACTAAAATCATCAATACAACTGT
ATGACAAAGTTGGCTACCTTCCTTCTTCGGGGAGCTTTAGGTGCTTCAGC
CGTTTGTTTCTTCAATAAAGTCACACACCCTCGTTTTAGCCAGATTATTT
GTATGTACTTTCAAACAAATAATGAATCGACTGAAATCATCAATACAACT
GTGTATGACAAAGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072552-exon-scaffold_8-1575043694:28022..29031 | TCONS_00072552-exon-scaffold_8-1575043694:28022..29031 | Clytia hemisphaerica | exon |
| TCONS_00072552-exon-scaffold_8-1575043694:26565..26946 | TCONS_00072552-exon-scaffold_8-1575043694:26565..26946 | Clytia hemisphaerica | exon |
| TCONS_00072552-exon-scaffold_8-1510915933:28022..29031 | TCONS_00072552-exon-scaffold_8-1510915933:28022..29031 | Clytia hemisphaerica | exon |
| TCONS_00072552-exon-scaffold_8-1510915933:26565..26946 | TCONS_00072552-exon-scaffold_8-1510915933:26565..26946 | Clytia hemisphaerica | exon |
| TCONS_00072552-exon-scaffold_8-1491911889:28022..29031 | TCONS_00072552-exon-scaffold_8-1491911889:28022..29031 | Clytia hemisphaerica | exon |
| TCONS_00072552-exon-scaffold_8-1491911889:26565..26946 | TCONS_00072552-exon-scaffold_8-1491911889:26565..26946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:26565..29031 - |
Blast
The following BLAST results are available for this feature:
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