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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072551 ID=TCONS_00072551|Name=TCONS_00072551|organism=Clytia hemisphaerica|type=transcript|length=1622bp
TTTGTTCATATTGTCGAATGATGTCAAATAAGAACCTGCCTTCAATCTTT
GGGCCGTGTCTGCAACAACATGGGATAATTTCGTCAAGAATCTCTTGGAA
ACCATTTCTGACCCGTGCGTTCCATGCAAGCCATTAAAAAAGAGCAAGTA
TTGTGATTGCAGAGATGTTACACCAATGGAAGACTGTAAATCGTTCTTAA
AATCTGGATACTCCAAAAGTGGGTTATACACACTGCCGAGCTCACGTTTC
AACAAATTGACAACTTTTTGTGACCAGGAGACTATGGATGGTGGCTGGAC
AACCATTTTACGGCGAATGGACGGCTCTGTTGATTTTGCTCGAAACTGGC
ACGACTACAAAGTTGGTTTTGGTCGACTACAAGGTGAATTCTGGTTTCGG
AAATCAAAACATCTATGATTTAACTAAACCACAAGTTGCTCCTAAGAAAT
CCCAACTTTTGATTAATATGTTGGTTAAAGGAAAACCTGTTTTCGCATTA
TACGATTCTTTCGAAATTGGTAGTGAGGCGTACAAGTACATTTTGAGGAT
TAGCACTACAGCGACTGGTAATGTATCGGTCCCCAACGGCTTCGGTCATT
ACCATAACAACATGAAATTCTCAACCTACGACTCCGATAATGACAGGAAC
GGTAAAAGCTGCTCACAAACATTTGGAAATTcagGTTGGTGGTTCAACAG
TTGTCATGTTACCCTGTTAACGGGtgtttatgacttgaaaaaaccTCACA
CTGGTGGCATTGTATGGCGATGGAATGACAAAACAGTTCCTAGCTTTGTC
GAAAtgaaaatcagaagaaaagaTTAAATGTCAGAGAGGCAGTCTACTAG
TATACATATTATAAACTTCTCTAGTGTCGGGCGGGGGGGGGAcctaggca
aaattgggtacggggacgtaTGCCGCTGGCCAGGGTCACTTTTTAGGCTC
TGAatatatctgacagggtcgacttttggttattttgcaCAATTTCTAGA
GTGGAgattagaaaatctttcaatttttcgactagTTTCAGTCATTTTTG
CCTCGATTTGTCGTACTGACAGGgccccaaatttaccaaaaattcatatc
tggcATGGTGTACTTTGTctacttttcaaactccagcggcacgtccccgg
tagccgtcaaggtcagtgcctcCCCACCCCGGGCTCTGGtgtaaaagaaa
atgtttaCTGATTTTTGCGGACTCGGACTTGCCCTAAGTTATATTAAGTA
TTGAACAAGCAGGGTTCAATGTTTATGAAAGACATGCGAGTTGAGTATTA
TAGGCTAAGCTTTTATTGACCATTATATCATTGTAAAAAGGTTTACTAAC
TTTGGACTTAAACttgttattttgaattttctttaattGTACTATCAACT
TCGTCATTTGTTTTACAGTATTgtaattttcatatttcttatttctctga
aataaaacttttagcATTTAATTTCGATcttagtctggagatccatactc
tctattcaaacttacaccacataagcaaaaatTCCATCAGAAactactca
ttgagagtatggtatttttgacccagtttgaatttgtttacatttgctTT
GAATTTCGAGCCAAAAAAGCCC Run BLAST on NCBI protein sequence of TCONS_00072551-protein >TCONS_00072551-protein ID=TCONS_00072551-protein|Name=TCONS_00072551-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MVAGQPFYGEWTALLILLETGTTTKLVLVDYKVNSGFGNQNIYDLTKPQV
APKKSQLLINMLVKGKPVFALYDSFEIGSEAYKYILRISTTATGNVSVPN
GFGHYHNNMKFSTYDSDNDRNGKSCSQTFGNSGWWFNSCHVTLLTGVYDL
KKPHTGGIVWRWNDKTVPSFVEMKIRRKD Run BLAST on NCBI transcript from alignment at scaffold_8:6966..15603- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072551 ID=TCONS_00072551|Name=TCONS_00072551|organism=Clytia hemisphaerica|type=transcript|length=8638bp|location=Sequence derived from alignment at scaffold_8:6966..15603- (Clytia hemisphaerica)
TTTGTTCATATTGTCGAATGATGTCAAATAAGAACCTGGTAAGTTAACTA
TTCACCGTTTAGCAAGTGGCTCAAAAATTTCACGACTTCGTCAAAAATAA
TGATATTTTGAGGTGGAAAACAGGGATGTTGAGAGTTTTATATAATTTTA
TACCGTATTACTTCAAATTGACACTCCCTTCGTTAAAACGTCTCTCCTTG
AACTGTTAAAGAAAAAATTTTATTTCAAGGGTTTTCAATAAACGCCCCCT
CAAGTAAACGCTCCTCATNTCTCTCCTTAAACTGTTAAAGAAAAAATTTT
ATTTCAAGGGTTTTCAATAAACGCCCCCTCAAGTAAACGCTCCTCATAAA
ACCAAAAGATTTAACAAACGCCCGGGGCGTTTATAATTTTCTCATGGCTT
ATAATTTCCAAGTACTCTTTTTTACTTTGCCTTCATTCATCATTTCGTTA
GATCATTCGACTCCTTGATACACCCCTTCTCACTGACCCAGTAGGAAACC
CTCCCACTGGAAAAATCGGCCAAAATCTCGTCCACAGTAAAAAACCAACA
ATTTTTGTCCCGACTGAAAATAATCAAATAAACCAATCCTCACTGAAAAA
TATTGTGCTATTTTTCAATCCCCACCGAATTTTCTGACTTGAAAACAATG
TAATTCAAATCCCCAGCCATAGAAAACATGAGTATATCAATCCCCATCGA
GTTTCAGTCCGTTTTTTTTATACCTGGTGGCTGAAAGAATTCATCCGGGT
TTGTGAGAAGGGGATATCATGATGTCCTTACATGAGATAATAGAAAGCCC
GGGAGTGGGTACTCAGGCAAAAAAAGGGTTGGAAAAATCAGAAAATTAAA
TTTCAACTAAGGGTCGGAAAATAGGAAAATTTTAACTTTTTGCTCCTTGA
AAGGTCAAAATTTGGTCAAATTAGCCCCAATAAGGGTTGTAAAAATCGCA
AAATTTTCCTAGTTTTTCTCCTTTAAAATCCCGTTAAAGGCTCCGAAGGT
CAAAAGTCGGCGGCACATACCCGTCAACTCGCAACCCTAGTATCCCGCCC
CCCGGGTTTGAAAGAAGAGTAGTTGGAATTGGGACAGGGTGAATTACGAG
TTACTAGTACTAATGGTGAATGTTGCAGGTGCTACAAGCAAGAGGTAAAT
TGAGAAAAATAAGAAAAATAAGAAAATGACCAATTTATATGAAAGAGATT
TTCTATTAAATTTTGCAGTCTTTGCAATGGAAAAACGTTACAATACTTTT
CATTTTAAAATCTTGAGATGAAAAAGGTGCGAGATTAAGGTTATTGTGAT
AATAATATGGAAATCAGGGAAAATGACCATTTCATCAAAGTTGAAACGGA
TAGACATTCATACTCCTATAAAAAGAAAAATGTACAAAAATTGCACTCTC
CACCGCGTGTATTTTACTCCTCTGCACCCGCCCGCTATGGATCCCAATGA
CGTTGAGAATGTTAACTTTTATTGAAGAAATGTTATTTATAAAATAACAC
TCTCCGCCGTATTTCCAAATAACACTATATTACTGACAAAGCTCTGTAGT
TTGAACCAGCTTTTTTTTGCTTCATCAAAGAGAAGGCTAAATTACTTTGA
CCTGGAGCTTCGGGCAATATAGCTGTTTAATGACATTAGATTGCTTCTTT
CTTGTTCTAAAACAGACCAATATTGTATTTGTTTTCAAACACTGAACATA
ACTTGAGTGTGGTTTGATAGCTTCATAAAAGCTCAAGTAAATCGTTATTG
TATCGACTCAGCTGGGGGATATATTTCAAAACACTGGTCTCAATATTTCC
GGACAGTTTAATAAGAAGGAGAGAACAATCCGGGATTCATCAAGTTATCG
ATTCTCCTTCATACATTTGAACAAGTCAAGGAGATATCAAAGAAAGGGCA
CAATGAATATTTCCATTATTTCTATTGGTCATTTTGTGTTGACATTCGTT
GGAGGATCAGCAAACCTTATCGCTATATGGTGCCTTTACAAAGAAACTAT
GTCATTTTCATCCATTGAAGATCATAATATCTTCATTTTATCTCTTGCTA
TATCTGATCTTTTGGTTAGTTTGGTATATCAGCCATTATCAGGAATTCAG
TTTGTTATCGGGAGACCTATTCAAGCATCGGTCATTCGTTATATATCAGG
AGTTCTACTGTCCATGTCTTTATTGAATCTCAGTTTGCTTTCACTGGAAC
GTGTCATCAAGATTACTTTACCGAACAAACATGATTCTTGGATGGAAAAA
GGGAAAATTATAAAGTTGATTTTGATGTGCTGGGTATTGGAAGGAATCAT
TTATTCCACATCGTTCTTCTATCCAACCCTGTTCGGGATCACAATAATGT
TGCATGTTGTAGGAACTCTTCTTATTCTGATCATAAGTTATACTTTGGTC
TACCGCCAGGAGAGAAGATCAACAAAGATTTTAGCATCCTTCAGTACTTC
TAAATGTCAGAGCAGTAATCCTTCCAACTCCCAAGCGTCTAACTCAACCA
TCAAACAAACGAAGAATCGAGAACGGAGGTTGATTAAAAACGTTTTAACC
TTGTTATTGACACATTTCGTGTTTGTTGTTATAATCTTAATTATAGTGGG
CAGCGCCATATCAACCGCTGATGATCCTAAGCAAAGAGACTTTGCATTCT
TCCTTGGTGTTTTAATTGCTACGGTGAATCCAAGTTGTGTTAATCCTATC
TTTTATGTTTTCCGGACGAAAAAGAACAGAAAGAGAGTTCTTAATATATT
TTGCTGTCGAAAGAAAAGAGTTGTTCCTGAGTAACGTTCAATAGAAACAA
CACCGGTGTCGTTGCATGAAACTTTTTTTCCTGTCGTGCTGTTACGTCAG
GTGCATTGGACGAGAAAATTTTTTTCTCGAGAATAAACTTTCGCGAATCA
AGACGTAAATTTTCACATGAAAAAATGGTTTAGAGGGAAAAATACTTCTT
GATGGATTGGCTTGAAACTTTTGTCTTTTGTTTAGACTTATTAGGCTTTT
AATAGGCTAAAAAATGTCACAAAAGTTAAATTCATTCACTGTTTGATGTT
TTACAAAGTTTTTCTAGTTTGCAGTCAGTTCAATGCAAAATCTCGTATTA
CCATATTTGGAAGAAACCATTGCGTAATGTTATATAAATGTTCTACATCG
CATATAATGCGCATGCGTAAATTTAAACCACAAGTGAGTATTACACGCGT
TGATATACCACGAAATGAAGACACAGGGGTCGTCACTCACGGTCGGGGAT
GTGGAGGTTCCTTATAAGAAACATTTTTTATAGGAATATCGATGTTTTAT
AAGAAACACTGCTTATAAATATCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAGTT
AGGGTTAGGGTTGGAGACCCAAACAATAGCATAATTATACTAATTATGCT
ATTAATGATGTAATCTTTACTATACGAGATTTTTCATTGACCGCCCTCTT
TGCCAAGAACATTTTGAAAATCGAAAATCGCGAAAGTTTGTGCGCCTAAA
GTATCCTGTCACAATAACTGTATCAAAAACAATAAATTAACATGTGATTT
CATTGAAGTGGATGTGACCAACAATTTTTACTCGTTATATTGTTTCTCAA
TCATAATAACTTTTTCAGAATCAAGCGACCAGCGCTTAAAAAAAATCTTA
AATGATATGTCTTTTTTTTCTTTCTTTTTTTCGTGAAATAAGCCCGGGGG
CACTCGATTTCTAAACGACGGCATTTGCCGCCAAAAAATAGCTTTCAAAA
TCAGACCCTTACAGAGCAGCTCTTGAATAGTACCCTTACAGTGCATTTTG
CCGAACTTTTCTGACCCTACAGTGTTGTTTGATTTCATATCTTCTTTTGC
TGAAAATGAGCCAGAGATGTCGGTATAATGTGCAAAAAAAATCCAAATGG
GTGAGAGTCAAATTATAAAGATACATCAGATTTTACTATCAAACTTGCAA
TTCAGCAGTCCCCAAATTACACCCTTACAGTGTATCCAGCTAAAGAAAGA
CCCTTGTAAAGTGCACCCTTACAGTACATTTCGAGGGTCTTGAAAAACCT
ACTCTAAAGGGCGGCACGTGCCTGTTCGAATTACAGAGAGATTCGAATTA
TAAAGAGTGTTTAACTAGGATTTCCCATGGCAGGATATCAAGAGTGATTC
AAATAATTTGGAAAAGTTTGAATCAGCGAGAGTCCACAGTAGTTAATTCT
GCCAACAAATATAGTGACTAAGTGATCTTGTGTGCTTAATTGTAGGGGAG
CGTGGAATAAGCAAGGGGGTGGGTACTCCAGATAATAATCAACAAAATAT
GGGGGTCATAATTAAGTGATATTGACCTGATTTTGCTAAGAATCCCTAGG
AAAATGAAGGTTTAGGGCCATTTTGGTACTTCGTAAACATAAAGGCCATA
AAATGGGGGGGGGGTCATTATAAAGTGATATGGGGGTGACTTTTTTCCAA
AAATTGCAACATTTAAAATCCCCATCCCCCAAATGTAGAGGGCGACAGGA
GAAATTTCAATTACGTTGGCGTGATGCTAATGGAGTATGTTACACCAACG
ACAATCATAAAAATTCTGCTATCAACATTCCTTAAGTCCTTTGTCCTTTA
TAAAAGCGCTATATAAATGTATCGTATTCTGTCTTATCGATAAGACAGGA
ATAAAATAAAATAAAATAAAAAATGCAAACACTGTTTAAAAATGACTTCA
ACGAAATGATGATTATAAAATTTGATAGATATCTATCAAATTTTTCTATC
AAATTTTATAATCATCATTTCGTTGAAGTCATTTTTAAACAGTGTTTGCA
TTTTTTATTTTCCCCTACACTTCCTACTTTCGATTTTTGTGTCGTGTATG
AAAAAGTTCTGAGTATTTCGTCAAATCAGTGGTCACAGCAGTTTTTTTTC
TGTGAAACGGAAAATTTATTGATAGAGATATTTTGGTAAACAGTATCTAA
AATAGGTTGAAAAATAAAAATACATGAACGTCCTACTATGTATATACAAG
GTATATGCGATATATGCAAAACCTGCTTGAAATTCAATTTTTAAAACTTT
GATGAAGTTGTTCTAGAGAATAAAATCACTATTTCTTGCTAAATAACCAT
TTCTAACTGAGACGGAAGAACTTTGATCACTGTTAGATTCACCGCAAATG
CTATTTAAACGGCAAAGGATATTTGTAACAATGCAACATGCTAACTTATA
TAGCTAATTAAGCACAACCTCGTGTAAATGGTCTGGATCTTCAAGCTCAA
AATTCTAAAAATCAAAAGCTTTGCGTACTGTGTTGTAAAATACGAGTTCA
GAATATCTATCTTAAGGAAACTAATTTTTAATTGGCAGCAAAAAATTCCA
AATAATATAAAAACTTGGCCAGAAAATTACCTTGGTAATGCAGAACTTTC
TTTATTTTGGTGAATGGAAGGATAAAATTATTATTTTGCCTAGAGATGAT
TGTTTAGAGTCTTTGAAAAAATGAGTGCTTTAGGTCGTTGTTGTGACTGC
TGTTTATTGTTCTTCCACTTTTCTTTTAATTCTAATCTTTTACTATTTTT
TCTAAAATTTTGGTTATTCGAATAATTGAGAGACATAAAATGAGGTCAAA
GACAGCTTAGGTCAAACGTTAGGTCGTAGAAATGTACAGTTTTCACAGGA
GTGAAGCGGCTAAAGGCTTGAGGACACGGGAAGTTTTTTTTCGCGTTTGT
GCAATGCAACATTTTCGAAACGACGGTATGTGCCGCGCAAAATCTGCTTT
TCAAAATCGTACCCTTACAGTGCAGTTCAATATGGCTGAAAAGGTACTCT
TTCAGTGCATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCACCCTTAAGTGCGGCACATGACG
TAGGCCAGATCATATGAGTGTCCCCCCTCCCGGGGGGATGGAGCATGTTG
CATTGCACCAACGCGAAAAAAACTCTTCGTGTCCCCAAGCCTTAAAAAGG
CAAATAATCAAGTAAGACAAACTGTACAGTCCTTAAAATACCTCCTTAGG
GAAACTTCCCTGGAAGAAGGAAGTTTAAGAATGAATAAGGAGTACTGAAA
GATAAAGATAAAATCTTATATTAATATTCTTGGAAAACAGTGGAAAGTAG
AGATAAGAAATAACCTTGTCTTATTAAACACCTTCTTGCATCCATAAGAC
ATTTAATGAATATACTAAAAGAATGTTATTCAAAAATTCTAAATTCGTAT
TATAACTTTGATTTGCTTACACTCAATCTTACAGTTTTGATTCTCTTTAA
AAGAGGCTTTTCCAACAAACCAAACTTAGTGCACGCTGAACTTCGACGTG
GTTACAATCAAAAAAATGGATCTCAAAGCTAAATTCCTTGTTATTGTTAT
AGCCTTCAATCTTTGGGCCGTGTCTGCAACAACATGGGATAATTTCGTCA
AGAATCTCTTGGAAACCATTTCTGACCCGTGCGTTCCATGCAAGCCATTA
AAAAAGAGCAAGTATTGTGATTGCAGAGATGTTACACCAATGGAAGACTG
TAAATCGTTCTTAAAATCTGGATACTCCAAAAGTGGGTTATACACACTGC
CGAGCTCACGTTTCAACAAATTGACAACTTTTTGTGACCAGGAGACTATG
GATGGTGGCTGGACAACCATTTTACGGCGAATGGACGGCTCTGTTGATTT
TGCTCGAAACTGGCACGACTACAAAGTTGGTTTTGGTCGACTACAAGGTG
AATTCTGGTTTCGGAAATCAAAACATCTATGATTTAACTAAACCACAAGT
TGCTCCTAAGAAATCCCAACTTTTGATTAATATGTTGGTTAAAGGAAAAC
CTGTTTTCGCATTATACGATTCTTTCGAAATTGGTAGTGAGGCGTACAAG
TACATTTTGAGGATTAGCACTACAGCGACTGGTAATGTATCGGTCCCCAA
CGGCTTCGGTCATTACCATAACAACATGAAATTCTCAACCTACGACTCCG
ATAATGACAGGAACGGTAAAAGCTGCTCACAAACATTTGGAAATTCAGGT
TTGTTTTGTTTTCAATATCATTATTATTGGGAAATTTTGTTAAGAAAGTT
TTGAAGAAATTAAGTGTTAATTTTCTTGATAAAGCACGATTTTTTGCTTA
GTGCTTATATATCTGTATAATATCTAACTAAACTTTATACTTCGTTCCAG
GTTGGTGGTTCAACAGTTGTCATGTTACCCTGTTAACGGGTGTTTATGAC
TTGAAAAAACCTCACACTGGTGGCATTGTATGGCGATGGAATGACAAAAC
AGTTCCTAGCTTTGTCGAAATGAAAATCAGAAGAAAAGATTAAATGTCAG
AGAGGCAGTCTACTAGTATACATATTATAAACTTCTCTAGTGTCGGGCGG
GGGGGGGACCTAGGCAAAATTGGGTACGGGGACGTATGCCGCTGGCCAGG
GTCACTTTTTAGGCTCTGAATATATCTGACAGGGTCGACTTTTGGTTATT
TTGCACAATTTCTAGAGTGGAGATTAGAAAATCTTTCAATTTTTCGACTA
GTTTCAGTCATTTTTGCCTCGATTTGTCGTACTGACAGGGCCCCAAATTT
ACCAAAAATTCATATCTGGCATGGTGTACTTTGTCTACTTTTCAAACTCC
AGCGGCACGTCCCCGGTAGCCGTCAAGGTCAGTGCCTCCCCACCCCGGGC
TCTGGTGTAAAAGAAAATGTTTACTGATTTTTGCGGACTCGGACTTGCCC
TAAGTTATATTAAGTATTGAACAAGCAGGGTTCAATGTTTATGAAAGACA
TGCGAGTTGAGTATTATAGGCTAAGCTTTTATTGACCATTATATCATTGT
AAAAAGGTTTACTAACTTTGGACTTAAACTTGTTATTTTGAATTTTCTTT
AATTGTACTATCAACTTCGTCATTTGTTTTACAGTATTGTAATTTTCATA
TTTCTTATTTCTCTGAAATAAAACTTTTAGCATTTAATTTCGATCTTAGT
CTGGAGATCCATACTCTCTATTCAAACTTACACCACATAAGCAAAAATTC
CATCAGAAACTACTCATTGAGAGTATGGTATTTTTGACCCAGTTTGAATT
TGTTTACATTTGCTTTGAATTTCGAGCCAAAAAAGCCC Coding sequence (CDS) from alignment at scaffold_8:6966..15603- >TCONS_00072551 ID=TCONS_00072551|Name=TCONS_00072551|organism=Clytia hemisphaerica|type=CDS|length=1080bp|location=Sequence derived from alignment at scaffold_8:6966..15603- (Clytia hemisphaerica)
GTTGGTGGTTCAACAGTTGTCATGTTACCCTGTTAACGGGTGTTTATGAC
TTGAAAAAACCTCACACTGGTGGCATTGTATGGCGATGGAATGACAAAAC
AGTTCCTAGCTTTGTCGAAATGAAAATCAGAAGAAAAGATTAAATGGTGG
CTGGACAACCATTTTACGGCGAATGGACGGCTCTGTTGATTTTGCTCGAA
ACTGGCACGACTACAAAGTTGGTTTTGGTCGACTACAAGGTGAATTCTGG
TTTCGGAAATCAAAACATCTATGATTTAACTAAACCACAAGTTGCTCCTA
AGAAATCCCAACTTTTGATTAATATGTTGGTTAAAGGAAAACCTGTTTTC
GCATTATACGATTCTTTCGAAATTGGTAGTGAGGCGTACAAGTACATTTT
GAGGATTAGCACTACAGCGACTGGTAATGTATCGGTCCCCAACGGCTTCG
GTCATTACCATAACAACATGAAATTCTCAACCTACGACTCCGATAATGAC
AGGAACGGTAAAAGCTGCTCACAAACATTTGGAAATTCAGGTTGGTGGTT
CAACAGTTGTCATGTTACCCTGTTAACGGGTGTTTATGACTTGAAAAAAC
CTCACACTGGTGGCATTGTATGGCGATGGAATGACAAAACAGTTCCTAGC
TTTGTCGAAATGAAAATCAGAAGAAAAGATTAAATGGTGGCTGGACAACC
ATTTTACGGCGAATGGACGGCTCTGTTGATTTTGCTCGAAACTGGCACGA
CTACAAAGTTGGTTTTGGTCGACTACAAGGTGAATTCTGGTTTCGGAAAT
CAAAACATCTATGATTTAACTAAACCACAAGTTGCTCCTAAGAAATCCCA
ACTTTTGATTAATATGTTGGTTAAAGGAAAACCTGTTTTCGCATTATACG
ATTCTTTCGAAATTGGTAGTGAGGCGTACAAGTACATTTTGAGGATTAGC
ACTACAGCGACTGGTAATGTATCGGTCCCCAACGGCTTCGGTCATTACCA
TAACAACATGAAATTCTCAACCTACGACTCCGATAATGACAGGAACGGTA
AAAGCTGCTCACAAACATTTGGAAATTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072551-exon-scaffold_8-1575043694:15566..15603 | TCONS_00072551-exon-scaffold_8-1575043694:15566..15603 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1575043694:8056..8701 | TCONS_00072551-exon-scaffold_8-1575043694:8056..8701 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1575043694:6966..7903 | TCONS_00072551-exon-scaffold_8-1575043694:6966..7903 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1510915933:15566..15603 | TCONS_00072551-exon-scaffold_8-1510915933:15566..15603 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1510915933:8056..8701 | TCONS_00072551-exon-scaffold_8-1510915933:8056..8701 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1510915933:6966..7903 | TCONS_00072551-exon-scaffold_8-1510915933:6966..7903 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1491911889:15566..15603 | TCONS_00072551-exon-scaffold_8-1491911889:15566..15603 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1491911889:8056..8701 | TCONS_00072551-exon-scaffold_8-1491911889:8056..8701 | Clytia hemisphaerica | exon |
| TCONS_00072551-exon-scaffold_8-1491911889:6966..7903 | TCONS_00072551-exon-scaffold_8-1491911889:6966..7903 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:6966..15603 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00072551 vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.125e-28 Identity = 38/77 (49.35%), Postives = 43/77 (55.84%), Query Frame = 2
Query: 167 VTPMEDCKSFLKSGYSKSGLYTLPSSRFNKLTTFCDQETMDGGWTTILRRMDGSVDFARNWHDYKVGFGRLQGEFWF 397
T +CK L GY SG +T+ LT CD +T GGWT RRMDGSVDF R+W YK GFG GEFW
Sbjct: 112 ATGPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWL 188 HSP 2 Score: 68.1662 bits (165), Expect = 8.125e-28 Identity = 52/146 (35.62%), Postives = 73/146 (50.00%), Query Frame = 3
Query: 396 FGNQNIYDLTKPQVAPKKSQLLINML-VKGKPVFALYDSFEIGSEAYKYILRISTTATGNVSVPNGFGHYHNNMKFSTYDSDNDRNGKSCSQTFGNSGWWFNSCHVTLLTGVYDLKKPH---TGGIVWRWNDKTVPSF--VEMKIR 815
GN NI+ LT A S+L ++++ +G FA Y SF++ EA KY L + G S N ++NN FST D DND + +C++ F WW+ CH + L G+Y L PH GI W S+ EMK+R
Sbjct: 188 LGNDNIHALT----AQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGG--SAGNSLTGHNNNF-FSTKDQDNDVSSSNCAEKF-QGAWWYADCHASNLNGLY-LMGPHESYANGINWSAAKGYKYSYKVSEMKVR 324
The following BLAST results are available for this feature:
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