Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072546 ID=TCONS_00072546|Name=TCONS_00072546|organism=Clytia hemisphaerica|type=transcript|length=290bp GGAAACTGGTGCAAGCTTCAAGTTCAAGACAAATCTTTTTTTCCAAGGTC AATATTGACTAACCAAATACTGTTGTCTCAATAAGCAAACGATAACATGT GACGACAGTCGGACGTGAATTTAAAGAGCTAGAACACCAATTGTAGAGAG AAGTTATCAGATTTGGTGTCTGTGTAAGGTAACCACTGGTGAATACCCAA TAGTCCGTTAGAGTTGATGCAAAATGGACTTGGGACAAGGTTTACAGACG GCGAGGAAAACTACTGGTGACATCATTTAAAGAACCTGAA Run BLAST on NCBI transcript from alignment at scaffold_8:376209..376745+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072546 ID=TCONS_00072546|Name=TCONS_00072546|organism=Clytia hemisphaerica|type=transcript|length=537bp|location=Sequence derived from alignment at scaffold_8:376209..376745+ (Clytia hemisphaerica) GGAAACTGGTGCAAGCTTCAAGTTCAAGACAAATCTTTTTTTCCAAGGTC
AATATTGACTAACCAAATACTGTTGTCTCAATAAGCAAACGATAACATGT
GACGACAGTCGGACGTGAATTTAAAGAGCTATGAAGAAAATTTGTGTAAA
GGTGAGCGGATGTAAGAATCGTTGATTGTTACTAATGTccgaatgtcttt
tttttcgttgcgtgaatacgtgaaaatCGTaagttttcccaaaaattttc
cagattttctaaaaaaattcgaaagtgaACTTGGAAAACAAGATATTGTT
TGTGCAATGATTAGAAAATTTCCAAGGCCCATTCAGTatccaaagaaaaa
aattgttaccTGGAAAGGGAAGCTAACAGAACACCAATTGTAGAGAGAAG
TTATCAGATTTGGTGTCTGTGTAAGGTAACCACTGGTGAATACCCAATAG
TCCGTTAGAGTTGATGCAAAATGGACTTGGGACAAGGTTTACAGACGGCG
AGGAAAACTACTGGTGACATCATTTAAAGAACCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00072546-exon-scaffold_8-1491911889:376209..376338 | TCONS_00072546-exon-scaffold_8-1491911889:376209..376338 | Clytia hemisphaerica | exon |
TCONS_00072546-exon-scaffold_8-1510915933:376209..376338 | TCONS_00072546-exon-scaffold_8-1510915933:376209..376338 | Clytia hemisphaerica | exon |
TCONS_00072546-exon-scaffold_8-1575043694:376209..376338 | TCONS_00072546-exon-scaffold_8-1575043694:376209..376338 | Clytia hemisphaerica | exon |
TCONS_00072546-exon-scaffold_8-1491911889:376586..376745 | TCONS_00072546-exon-scaffold_8-1491911889:376586..376745 | Clytia hemisphaerica | exon |
TCONS_00072546-exon-scaffold_8-1510915933:376586..376745 | TCONS_00072546-exon-scaffold_8-1510915933:376586..376745 | Clytia hemisphaerica | exon |
TCONS_00072546-exon-scaffold_8-1575043694:376586..376745 | TCONS_00072546-exon-scaffold_8-1575043694:376586..376745 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_8 | supercontig | scaffold_8:376209..376745 + |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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