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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072544 ID=TCONS_00072544|Name=TCONS_00072544|organism=Clytia hemisphaerica|type=transcript|length=556bp
TGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCA
TTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTtgtaa
acaagaaaaattgacaCAAAAACGAGAAAATATCATTTCATTATCGCTTT
CTGAAGCTGTTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCC
TCATTACCATCCAAAAATATTGCTGACATCATGCTtctcttaaaaaacaa
acacaaacaTCGAAAAATACATTTCCTTTTTGATGAAGTGCCGCAAGAGC
TGTTCACAAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAA
TTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCG
AAAGATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAA
AAAGCTCAGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATA
ATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCTCAATCAac
aacaaa Run BLAST on NCBI transcript from alignment at scaffold_8:200014..200827+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072544 ID=TCONS_00072544|Name=TCONS_00072544|organism=Clytia hemisphaerica|type=transcript|length=814bp|location=Sequence derived from alignment at scaffold_8:200014..200827+ (Clytia hemisphaerica)
TGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCA
TTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTtgtaa
acaagaaaaattgacaCAAAAACGAGAAAATATCATTTCATTATCGCTTT
CTGAAGCTGTTGGTGAAAGAAGGAATGTCACCGATTTTTACAACTGTTCC
TCATTACCATCCAAAAATATTGCTGACATCATGCTtctcttaaaaaacaa
acacaaacaTCGAAAAATACATTTCCTTTTTGATGAAGTGCCGCAAGAGC
TGTTCACAAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAA
TTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCG
AAAGATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAA
AAAGCTCAGGCATGGAACTTTTCAAACTACCAACCACAATGAGGATGAGC
AATTGCTTACataaattgaaagaagtttTGGAAGGTGAAATCGAAAGTTC
GCCCTGCTCCATAAACTTAGAAGTTCGATCGAAAGGTATAACATACCATT
TAAGTAACATTCTTTTATAATCGTGTTCAATTGCAACAGTGTGCAAGTAA
AATATGCTCATTTCCATTTATGACCGAAATATTTTCTTACTAgtacattt
taattttaatttttcaggaaacGTTTTGCTAACAAAAGACGAATCTAACA
AGGCCATAATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCT
CAATCAacaacaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072544-exon-scaffold_8-1491911889:200014..200472 | TCONS_00072544-exon-scaffold_8-1491911889:200014..200472 | Clytia hemisphaerica | exon |
| TCONS_00072544-exon-scaffold_8-1510915933:200014..200472 | TCONS_00072544-exon-scaffold_8-1510915933:200014..200472 | Clytia hemisphaerica | exon |
| TCONS_00072544-exon-scaffold_8-1575043694:200014..200472 | TCONS_00072544-exon-scaffold_8-1575043694:200014..200472 | Clytia hemisphaerica | exon |
| TCONS_00072544-exon-scaffold_8-1491911889:200731..200827 | TCONS_00072544-exon-scaffold_8-1491911889:200731..200827 | Clytia hemisphaerica | exon |
| TCONS_00072544-exon-scaffold_8-1510915933:200731..200827 | TCONS_00072544-exon-scaffold_8-1510915933:200731..200827 | Clytia hemisphaerica | exon |
| TCONS_00072544-exon-scaffold_8-1575043694:200731..200827 | TCONS_00072544-exon-scaffold_8-1575043694:200731..200827 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:200014..200827 + |
Blast
The following BLAST results are available for this feature:
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