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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072543 ID=TCONS_00072543|Name=TCONS_00072543|organism=Clytia hemisphaerica|type=transcript|length=605bp
NNTCTACATTCATTTCTCCTTATGTCACTTTCATTTAAAATTCCAAGAGA
CACCagccaaaacataaaataattcacaataattccaaaaaaaatgaaaa
acatatcTCAGTCAAGCAAATGAATTCTTGGTACTTATTTTAATTCATAg
cttgggtttctttactttgtGTATTCATggtattcaTGTCAGGATGATAG
CGGAACAGGAAtataatccatcaaaaatgaatttaaaacacATTCCCAAG
TTAGTTCAAGAAATGTCGTTTGGTGTTTGAGCTCTGAGTTTGGGAAGAAG
CACGTCAAATTATCAATATCATTGACcgattcataattttgataacaaaa
atcacattcatgGTCTTGAGAAGTCTGTTTACAGTCTCTTTGATATCGGA
ACTATTTGACAGGTTCAGTATCATATTCAatcaattcaaaaattttgtct
ttgttggtcACTAGATAGCCTATCATATGCTTCTGCTGCTGTTGTATTTT
GCTGGCCATGGGTCATGCTGTATCAtgatggacaaaataaaatcctccaA
AAATTCCTCACAACAAGATTCAAAGCAGATCATTCCCATAATTTTTGAGT
TTCNN Run BLAST on NCBI transcript from alignment at scaffold_8:175624..176372+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072543 ID=TCONS_00072543|Name=TCONS_00072543|organism=Clytia hemisphaerica|type=transcript|length=749bp|location=Sequence derived from alignment at scaffold_8:175624..176372+ (Clytia hemisphaerica)
NNTCTACATTCATTTCTCCTTATGTCACTTTCATTTAAAATTCCAAGAGA
CACCagccaaaacataaaataattcacaataattccaaaaaaaatgaaaa
acatatcTCAGTCAAGCAAATGAATTCTTGGTACTTATTTTAATTCATAg
cttgggtttctttactttgtGTATTCATggtattcatgatgtaatctttt
atacggacaCAAAATAATctggaactagtggcaaaatttgccaccagtct
tttgttattttgccactagtttcggcttatctcgggtgcttccgtataaa
agattaagtcatgaatatcatgaatatacaTGTCAGGATGATAGCGGAAC
AGGAAtataatccatcaaaaatgaatttaaaacacATTCCCAAGTTAGTT
CAAGAAATGTCGTTTGGTGTTTGAGCTCTGAGTTTGGGAAGAAGCACGTC
AAATTATCAATATCATTGACcgattcataattttgataacaaaaatcaca
ttcatgGTCTTGAGAAGTCTGTTTACAGTCTCTTTGATATCGGAACTATT
TGACAGGTTCAGTATCATATTCAatcaattcaaaaattttgtctttgttg
gtcACTAGATAGCCTATCATATGCTTCTGCTGCTGTTGTATTTTGCTGGC
CATGGGTCATGCTGTATCAtgatggacaaaataaaatcctccaAAAATTC
CTCACAACAAGATTCAAAGCAGATCATTCCCATAATTTTTGAGTTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072543-exon-scaffold_8-1491911889:175624..175808 | TCONS_00072543-exon-scaffold_8-1491911889:175624..175808 | Clytia hemisphaerica | exon |
| TCONS_00072543-exon-scaffold_8-1510915933:175624..175808 | TCONS_00072543-exon-scaffold_8-1510915933:175624..175808 | Clytia hemisphaerica | exon |
| TCONS_00072543-exon-scaffold_8-1575043694:175624..175808 | TCONS_00072543-exon-scaffold_8-1575043694:175624..175808 | Clytia hemisphaerica | exon |
| TCONS_00072543-exon-scaffold_8-1491911889:175953..176372 | TCONS_00072543-exon-scaffold_8-1491911889:175953..176372 | Clytia hemisphaerica | exon |
| TCONS_00072543-exon-scaffold_8-1510915933:175953..176372 | TCONS_00072543-exon-scaffold_8-1510915933:175953..176372 | Clytia hemisphaerica | exon |
| TCONS_00072543-exon-scaffold_8-1575043694:175953..176372 | TCONS_00072543-exon-scaffold_8-1575043694:175953..176372 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:175624..176372 + |
Blast
The following BLAST results are available for this feature:
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