TCONS_00072527 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072527
Unique NameTCONS_00072527
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072527 ID=TCONS_00072527|Name=TCONS_00072527|organism=Clytia hemisphaerica|type=transcript|length=2618bp
tagCATAATAAACAAtggtcaaaagaaaattaaaaacatcagaACCTGCT
CGAAACGTGGTTTCCAAAATAAATGACGTGAAAACCGTCCCAAATGAGAA
GATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGACCAAgattgtgacg
tcatcattgaAGTCAAAGACAAAGAAGTCTATTTACCATTTACTTTCTTG
AAAATGGCttcgaaagaaaatgttttacgGCCGTTTACTGGTGGGAGATT
GTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGCATTGTCTTTTTACG
TCCCAAAAATAAGCAAGGGTGATACCGTTGATTTTACAAATCTTGAGGAG
GCTGTCAGGGTGgctaaatttctaaatttaaaaagaCTTCAAGATTACAT
TGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCACGAGTTCTTGACG
AAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGACATGTTTTTG
TTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTAAAACACTTCGGTCT
TATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATGCGATATGAAC
TTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGCCAAACATGTT
TACGAGAGAAAGTTTTTCCGTGAAACTGTAGTTGGAATGGAGATTCAAAT
GATTTTCAACTTTCTTGATTTGGAAGTATACGAAAATCGGATGGTTGACC
TTGCACCTaagaaaaaccctatttttatgccgaaaaacaattatttgacT
TCTTTGGAAAAGTTTGTTGATTTGGAGTCGATATCATGCAATAAAGAGTC
TGCTGATTGCGTCACGCTAGTCGTTGAAGAGAGAGAAATTCACGTCAATT
CTTTCCTCTTAACCAACAATTCTCCTGTTTTCAAAGCAATGTTGAGCTCA
AATTCATTCAAAGAAGGTCAGAGCAAAAGGATTGAGTTACCAGGCAAGAA
TTTCAACCAAATCATTTATCTTCTACAGCATTTATATTCGTCGAAACATA
TTGGAAATATTTATCGTGTTCGTGATCTATCACTGCTTTGCCGGGAGTAC
CAAATCGATTGGTTgactgaaaaaatcaaaacttttatcATCGAAGAAGG
GTCAAAGAATACGGCTGACGAAATCCTTCAATATCTCACACTTTCAGAGG
AAGCGAACTTTGGACTTCCATTGTACGAAACTTTGGTGAATCAGTTACAT
GACTCGTTTCAAACCATTCAACtgtgtccaaatttcatgtcttTGAGTCG
TACTATGCAAATCGTGATCGCTCGAAAACGTTTATGGTTCttacttgaaa
attttggctcTTCCCTGAAGAACCTCTGCCTGAACAGAGTGGCTTATGGC
TTCCTCTCTATTTTCAAAGAACAACCGGTCTTCAACTTTGAGTACAATGA
GATAGAACAATCTTACTTAAGGCGATGTCATAAAGATggaaaatcaaatg
aaaatagTTAATCAAAACCAAAATATTCAGTTTGATGCTGAGTTCAAAAT
TAACTGCCGATCGGGTTTAATCGACTATGTATTTATGGATTTATGATACC
CTTTTATTTCTTAACATCTATTCGTCTAGGTTTTTAAGAGCAGTTTTTGA
TGCCACTCCACGACTCAATTCAGGAGGGTGTATTTGAAAAGTTGTGGAAA
ACTTCTCAGAGACTTTGAAACAATATATGgtcattttgttgttgtttttt
ggacctaccccggtgggaaGTAATATTTCCTAATATTATCATAAAATGAA
TGAGACATTTTCTTGATCGCtccaaattttatatttttaagagcTAATCG
TTTGCGGTAGAGGGGACCAATTTTAATGACTCGGTTAGCTACCCTTAGCG
TAATATTTACATTTCTCTCTATACCTTAACAGCCCTTTTTACGTTGGTCC
TAATTTAGCATCGGCCATTGTTACGCCAAAGATGAATTTTACAATTTAAT
TCCGACTCCTTACGCCAGCGACGAAAAAACTACGCCGATAAGGGTCTTAC
GCAAgcgtaataagggccgataaggtatgaaTTTGAACTTTCGCTATAGG
ACAAACGTGAGAGGGACGAACTTTTTCCAATGTTGTCGAggaattttttc
tgaaagcggCAAAGAAAGAGACTTGGTTCTAATATAATGTTTTTGGTGAA
AGGTTTTACTTTTGCTAATCACCGCAAATTTTCAATATGTCGATGACATA
TGAAAGAAGCAGTTCCCTTGGAAACGTGAAAAATAGCCGACTTGAAATTT
CCATGCCAATCGAACCATGGagtaaaaagaagaaataatttGATTGGGAA
TGACCTATTTTATAGCGAAGTAGTTAACGATAAAGATATTGAAAAAAGTC
CTTCTCGCTATTCCGATTAACCTACTGACTGAATAAATGCGAGAATTAAT
CTTGATAACAAATCTCGAGAATAAAAAGAATGAATTCGATACGGAGTCTT
CTGAATTTAAAAGAAGCTCGAAAACGTTAGTCAATGAATTGAATAATGCT
CTGTTCGTTTGATATCCTGGTTGAGATTGGTATGGCGATCGGATTAAGCT
TGTACAAGGCCTTGTTAT
Run BLAST on NCBI

protein sequence of TCONS_00072527-protein

>TCONS_00072527-protein ID=TCONS_00072527-protein|Name=TCONS_00072527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=498bp
MVKRKLKTSEPARNVVSKINDVKTVPNEKMKEKLVPFDFDDQDCDVIIEV
KDKEVYLPFTFLKMASKENVLRPFTGGRLYLDVSSKSLVEALSFYVPKIS
KGDTVDFTNLEEAVRVAKFLNLKRLQDYIEKVCLRKAFYHPRVLDEKGIN
ALRIAQTYDMFLFLEQRCISESWLKHFGLIANHDFLVLSNDMRYELLKNT
VIRQLVTYAKHVYERKFFRETVVGMEIQMIFNFLDLEVYENRMVDLAPKK
NPIFMPKNNYLTSLEKFVDLESISCNKESADCVTLVVEEREIHVNSFLLT
NNSPVFKAMLSSNSFKEGQSKRIELPGKNFNQIIYLLQHLYSSKHIGNIY
RVRDLSLLCREYQIDWLTEKIKTFIIEEGSKNTADEILQYLTLSEEANFG
LPLYETLVNQLHDSFQTIQLCPNFMSLSRTMQIVIARKRLWFLLENFGSS
LKNLCLNRVAYGFLSIFKEQPVFNFEYNEIEQSYLRRCHKDGKSNENS
Run BLAST on NCBI

transcript from alignment at scaffold_79:18778..26167-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072527 ID=TCONS_00072527|Name=TCONS_00072527|organism=Clytia hemisphaerica|type=transcript|length=7390bp|location=Sequence derived from alignment at scaffold_79:18778..26167- (Clytia hemisphaerica)
TAGCATAATAAACAATGGTCAAAAGAAAATTAAAAACATCAGAACCTGCT CGAAACGTGGTTTCCAAAATAAATGACGTGAAAACCGTCCCAAATGAGAA GATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGACCAAGATTGTGACG TCATCATTGAAGTCAAAGACAAAGAAGTCTATTTACCATTTACTTTCTTG AAAATGGCTTCGAAAGAAAATGTTTTACGGCCGTTTACTGGTGGGAGATT GTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGCATTGTCTTTTTACG TCCCAAAAATAAGCAAGGGTGATACCGTTGATTGTAAGTGACTTTATCTT GGCAATTTTCGTTTCTATGAAAGACGGAGGGCATTTGATCGTGGGTGTAT GATGATAAAATTTTGTAAACATGTGACTCATAAAATTTTATTAAAAGTCA AAAAGTTTCGGAGTGTCAAAAGAAATTTTCTGTGAGCTATTAGCAAAAAA GCGCAGGGTGGTGGAAAACAACCCCCTGATAAATACGGTTAAAGCTTCAC TTTTTCTTGCTTGACAAAGGTTGAAGATTCCACTCTAACTCCTTCGGGGC TTCAAACTCAAACTTCAAGCAGCTTTTAGTCCGGGAGCCAAACCCAAAAA ATGGCATTTTGCTTAACCCAAGATTNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTAGTTTTGGAAATG GTCGGTCCCCAAAGCTAACTCCTGGTCAATTTTTCATACTGGGCCCGAGT TTAGGGGGTACTTTTTACCCTTTGTAAGGACTTGTTAAGGAAAATGCCAT TCCAGGGACGATATAATTTACTGTATCTAGTCAATCGGTTGACCAATTGC TTTGAAACTTTGCAAAAAGTTTCAAGGTAGGCTGATGATTATTTTCGCAA AAGAATTTTTGTGAAAAATTATTTTTATAGGTTTGCCTGGGGAAAAAAGG GGGAAATTTGGGTATTTTAACTAAACTTTGACCCTTTTTAAGTCTGGGAC CTACCCAAACAACTTTTAATGAGGCACAAACCTAGGTGTTATGACAGACT TTGATGCAATACATCAGAAAAATTTCAAACAGACAGTATTTAGTATTATT TCAGGGCTGCAGGGGGTAAAATTGCCCATTTTTATGGGTTTTTACCTTAT TTGAGCAATTTTCACCACTAATCTTGGTTAAAAAATCATCAAAAAAAGTT TTAACTTGATTTTCGTGTAATATATCCTGAAAGATTACAATGCTGACTTA AAACTAACGAAACCAGGGTGCAAATGGACAAACCAGGGGGTAAAAATGCC CATTTTAGGCGATTTTATCGTTTTTGGACCTATTTCACCCATAAAGCGGT TTTATGGTGTACCAATTTTATTTCTGACCACTGAAACAAGGATCATTTTG TAGTAGGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNTTAACAATGACACAGCACTTTTATTT CTACCCAAGTTAACAATATTTTACAAATTATTAGGCTCCAAATAACTATT CTACTTAAAAACCAGTACAGGGATCATTTTTTTGTGTAGGTTGTCAACAA AAGTACTAAGAAATGACTGAAGGGTATATAACTGGTTTCCATCTCAAAAT TTCATGAATTTGAGGCTACCATACAATAAAAACATCCAAATTCAGGCAAC AACTACCAAGAAGTGGTGTATTTACCCCCTGATTTGCCAACAGTGACCCT GATTACAGACAATGAAAACCACAAATAACTTTCCCATTGCTCCTACTACA AAATGATCCTTGTTTCAGTGGTCAGAAATAAAATTGGTACACCATAAAAC CGCTTTATGCCCTTTATGGGTGAAATAGGTCCAAAAACGATAAAAATCAC CTAAAATGGGCATTTTTACCCCCTGGTTTGTCCATTTGCACCCTGGTTTT GTTAGTTTAAGTCAGCATTGTAATCTTTCAGGATATATTACACGAAAATC AAGTTAAAACTATTTTTGATGACGTTTTAACCAAGATTAGTGGTGAAAAT TGCTCAAATAAGGTAAAAACCCATAAAAATGGGCAATTTTACCCCCTGCA GCCCTGAAATAATACTAAATACTGTCTGCTTGAAATTTTTCTGATGTATT GCATCAAAGTCTATCATAACACCTAGTTTGTGCCTCATTAAAAGTTGTTT GGGTAGGTCCCAGACTTAAAAAGGGTCAAAATTTAGTTGAAATACCCAAA TTTCCCCCTTTTTCCCCCAGACAAACCCATAAGAATAATTTTTCACAAAA ATTTTTTGCCGAAAATAATCATCAGCCTACCTTGAAACTTTTTGCAAAGT TTCAAAGCAATTGTTGGTCAACTGATTGACTAGATACAGCAAATTATATC ATTCCTGGAATGGCATTTTCCTTAACAAATACTTACAAAGGGTAAAAAGT ACCCCCTAAACTCGGGCCCAGTATAAAAAATTGACCAGGAGTTAGCTTTG GGGACCGACCATTTCCAAAACTAGGATAGTTGAGGATTCCAAAAATGTAT AGTTTATCCTGTAGAATCTTGGGTTAAGCAAAAGTGCTTATTTAAGGAGA TATAGGATTTGGCTCCCGGACTATTTCAGAACTATTCTCGAAAAAAGCTT TGTAGATTTTTGAAAATTGCAGGTAAGTTAGAGCAAGGAATTCCTCTTTT TCTAAAATATTATGATCCTGAATGAAAGACTTTTTTAGATATTATTTCAA TTGTTTTTACTGGGCCAAAAATTTGATGCAGGAGAAGGATACTAAGAGGG TCTTCTTTCTAACGACATAAGTAAGTTTTGTAGATAGTACAAATTTTCGG GGGGGGGGTTCCTAGGAAAAAAGTTACCACAGAGTATTTACTCACTGGGA AACAAGTACTGCGGGTGTACTTTTTTCCGGGGAATACNTGGGGGGGGGGG GGGTTCCTAGGAAAAAAGTTACCACAGAGTATTTACATTTACTCACTGGG AAACAAGTACTGCGGCTGTACTTTTTTCCGGGGAATACTTAATTTTTGTT GACTGGGGGCCAATTATGACTTTTTGATAGACTTGACGGCGATGATAAAT GTAATATAGCTTCGACAACTTCGACACTGGATCCAGTTAAATTGAAAACT TTTTTTTCCGGCCAACTTTCCACACATCATGAGCTAAACAACTAATCTCA AACTATTTGATATTTCAGTTACAAATCTTGAGGAGGCTGTCAGGGTGGCT AAATTTCTAAATTTAAAAAGACTTCAAGATTACATTGAAAAGGTCTGCTT GAGAAAAGCTTTTTACCATCCACGAGTTCTTGACGAAAAAGGCATTAACG CTTTGAGAATCGCTCAAACCTACGACATGTTTTTGTTCTTAGAACAACGA TGTATTTCTGAAAGTTGGCTAAAACACTTCGGTCTTATCGCTAATCACGA TTTTCTAGTCTTGAGCAACGACATGCGATATGAACTTTTAAAGAACACAG TTATACGTCAATTGGTGACTTATGCCAAACATGTTTACGAGAGAAAGTTT TTCCGTGAAACTGTAGTTGGAATGGAGATTCAAATGATTTTCAACTTTCT TGATTTGGAAGTATACGAAAATCGGATGGTTGACCTTGCACCTAAGAAAA ACCCTATTTTTATGCCGAAAAACAATTATTTGACTTCTTTGGAAAAGTTT GTTGATTTGGAGTCGATATCATGCAATAAAGAGTCTGCTGATTGCGTCAC GCTAGTCGTTGAAGAGAGAGAAATTCACGTCAATTCTTTCCTCTTAACCA ACAATTCTCCTGTTTTCAAAGCAATGTTGAGCTCAAATTCATTCAAAGAA GGTCAGAGCAAAAGGATTGAGTTACCAGGCAAGAATTTCAACCAAATCAT TTATCTTCTACAGCATTTATATTCGTCGAAACATATTGGAAATATTTATC GTAAGTATTTTCAAATCTAATGGGATAACAATTATTTCATTGAGCCGACA CCATTCCTTTTCATCGTTCGATAAGAAAGTGGTTATATGTACACACTTTT TTTATAAGAATTGTGTATTTTGGATGAGGGTCAAGTATTCTTAAGNCTTG ACGAAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGACATGTTT TTGTTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTAAAACACTTCGG TCTTATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATGCGATATG AACTTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGCCAAACAT GTTTACGAGAGAAAGTTTTTCCGTGAAACTGTAGTTGGAATGGAGATTCA AATGATTTTCAACTTTCTTGATTTGGAAGTATACGAAAATCGGATGGTTG ACCTTGCACCTAAGAAAAACCCTATTTTTATGCCGAAAAACAATTATTTG ACTTCTTTGGAAAAGTTTGTTGATTTGGAGTCGATATCATGCAATAAAGA GTCTGCTGATTGCGTCACGCTAGTCGTTGAAGAGAGAGAAATTCACGTCA ATTCTTTCCTCTTAACCAACAATTCTCCTGTTTTCAAAGCAATGTTGAGC TCAAATTCATTCAAAGAAGGTCAGAGCAAAAGGATTGAGTTACCAGGCAA GAATTTCAACCAAATCATTTATCTTCTGCAGCATTTATATTCGTCGAAAC ATATCGGAAATATTCATCGTAAGTATTTTCAAATCTAATGGGATAACAAT GATTTCATTGAGCCGACACCATTCCTTTTCATCGTTCGATAAGAAAGTGG TTATATGTACAAACTTTTTTAATAAGAATAGTGTACTTTGGATGAGGGTG AAGTATTCTTAAAAAGAAACTGCCAAAATTGAAAGTGAAATATTCTTAAC GTATCCTTACTTTTTTAGACTTGACTTTTATACAAACATGAGAAATGATC AATTTCAGAGTTTGTGGCTTTTGAGTGCACATTTGGAACAAAAATTATAT TTCTGCCTCAAATTTTTAGTTTAAGTATAAAACAAAAGAAAGCAGATTTT TTTGTTAACCAAATACAAAATGGCCGTTTTCTTATCAAATTCTGTGAAAC TCACCCTAGAGGGTATTCTTAGGGTATTCTTACGATTTGGCCAATTTTCA CCCTGATATTCTTATAGAAGATATTCTGAAATAAAAAGCGTCTTTTAAGA AGAGGGGGAGGAGGGTTTTCTTTAAATTGAAACCAAAATTTATTTTTTTG CTAAACGAAATCTAATCATTATATGTTTCTTTTGAAGGTGTTCGTGATCT ATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTGACTGAAAAAATCA AAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGCTGACGAAATCCTT CAATATCTCACACTTTCAGAGGAAGCGAACTTTGGACTTCCATTGTACGA AACTTTGGTGAATCAGTTACATGACTCGTTTCAAACCATTCAACTGTGTC CAAATTTCATGTCTTTGAGTCGTACTATGCAAATCGTGATCGCTCGAAAA CGTTTATGGTTCTTACTTGAAAATTTTGGCTCTTCCCTGAAGAACCTCTG CCTGAACAGAGTGGCTTATGGCTTCCTCTCTATTTTCAAAGAACAACCGG TCTTCAACTTTGAGTACAATGAGATAGAACAATCTTACTTAAGGCGATGT CATAAAGATGGAAAATCAAATGAAAATAGTTAATCAAAACCAAAATATTC AGTTTGATGCTGAGTTCAAAATTAACTGCCGATCGGGTTTAATCGACTAT GTATTTATGGATTTATGATACCCTTTTATTTCTTAACATCTATTCGTCTA GGTTTTTAAGAGCAGTTTTTGATGCCACTCCACGACTCAATTCAGGAGGG TGTATTTGAAAAGTTGTGGAAAACTTCTCAGAGACTTTGAAACAATATAT GGTCATTTTGTTGTTGTTTTTTGGACCTACCCCGGTGGGAAGTAATATTT CCTAATATTATCATAAAATGAATGAGACATTTTCTTGATCGCTCCAAATT TTATATTTTTAAGAGCTAATCGTTTGCGGTAGAGGGGACCAATTTTAATG ACTCGGTTAGCTACCCTTAGCGTAATATTTACATTTCTCTCTATACCTTA ACAGCCCTTTTTACGTTGGTCCTAATTTAGCATCGGCCATTGTTACGCCA AAGATGAATTTTACAATTTAATTCCGACTCCTTACGCCAGCGACGAAAAA ACTACGCCGATAAGGGTCTTACGCAAGCGTAATAAGGGCCGATAAGGTAT GAATTTGAACTTTCGCTATAGGACAAACGTGAGAGGGACGAACTTTTTCC AATGTTGTCGAGGAATTTTTTCTGAAAGCGGCAAAGAAAGAGACTTGGTT CTAATATAATGTTTTTGGTGAAAGGTTTTACTTTTGCTAATCACCGCAAA TTTTCAATATGTCGATGACATATGAAAGAAGCAGTTCCCTTGGAAACGTG AAAAATAGCCGACTTGAAATTTCCATGCCAATCGAACCATGGAGTAAAAA GAAGAAATAATTTGATTGGGAATGACCTATTTTATAGCGAAGTAGTTAAC GATAAAGATATTGAAAAAAGTCCTTCTCGCTATTCCGATTAACCTACTGA CTGAATAAATGCGAGAATTAATCTTGATAACAAATCTCGAGAATAAAAAG AATGAATTCGATACGGAGTCTTCTGAATTTAAAAGAAGCTCGAAAACGTT AGTCAATGAATTGAATAATGCTCTGTTCGTTTGATATCCTGGTTGAGATT GGTATGGCGATCGGATTAAGCTTGTACAAGGCCTTGTTAT

Coding sequence (CDS) from alignment at scaffold_79:18778..26167-

>TCONS_00072527 ID=TCONS_00072527|Name=TCONS_00072527|organism=Clytia hemisphaerica|type=CDS|length=4491bp|location=Sequence derived from alignment at scaffold_79:18778..26167- (Clytia hemisphaerica)
GTGTTCGTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTG
ACTGAAAAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGC
TGACGAAATCCTTCAATATCTCACACTTTCAGAGGAAGCGAACTTTGGAC
TTCCATTGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAACC
ATTCAACTGTGTCCAAATTTCATGTCTTTGAGTCGTACTATGCAAATCGT
GATCGCTCGAAAACGTTTATGGTTCTTACTTGAAAATTTTGGCTCTTCCC
TGAAGAACCTCTGCCTGAACAGAGTGGCTTATGGCTTCCTCTCTATTTTC
AAAGAACAACCGGTCTTCAACTTTGAGTACAATGAGATAGAACAATCTTA
CTTAAGGCGATGTCATAAAGATGGAAAATCAAATGAAAATAGTTAATTAC
AAATCTTGAGGAGGCTGTCAGGGTGGCTAAATTTCTAAATTTAAAAAGAC
TTCAAGATTACATTGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCA
CGAGTTCTTGACGAAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTA
CGACATGTTTTTGTTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTAA
AACACTTCGGTCTTATCGCTAATCACGATTTTCTAGTCTTGAGCAACGAC
ATGCGATATGAACTTTTAAAGAACACAGTTATACGTCAATTGGTGACTTA
TGCCAAACATGTTTACGAGAGAAAGTTTTTCCGTGAAACTGTAGTTGGAA
TGGAGATTCAAATGATTTTCAACTTTCTTGATTTGGAAGTATACGAAAAT
CGGATGGTTGACCTTGCACCTAAGAAAAACCCTATTTTTATGCCGAAAAA
CAATTATTTGACTTCTTTGGAAAAGTTTGTTGATTTGGAGTCGATATCAT
GCAATAAAGAGTCTGCTGATTGCGTCACGCTAGTCGTTGAAGAGAGAGAA
ATTCACGTCAATTCTTTCCTCTTAACCAACAATTCTCCTGTTTTCAAAGC
AATGTTGAGCTCAAATTCATTCAAAGAAGGTCAGAGCAAAAGGATTGAGT
TACCAGGCAAGAATTTCAACCAAATCATTTATCTTCTACAGCATTTATAT
TCGTCGAAACATATTGGAAATATTTATCATGGTCAAAAGAAAATTAAAAA
CATCAGAACCTGCTCGAAACGTGGTTTCCAAAATAAATGACGTGAAAACC
GTCCCAAATGAGAAGATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGA
CCAAGATTGTGACGTCATCATTGAAGTCAAAGACAAAGAAGTCTATTTAC
CATTTACTTTCTTGAAAATGGCTTCGAAAGAAAATGTTTTACGGCCGTTT
ACTGGTGGGAGATTGTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGC
ATTGTCTTTTTACGTCCCAAAAATAAGCAAGGGTGATACCGTTGATTGTG
TTCGTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTGACT
GAAAAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGCTGA
CGAAATCCTTCAATATCTCACACTTTCAGAGGAAGCGAACTTTGGACTTC
CATTGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAACCATT
CAACTGTGTCCAAATTTCATGTCTTTGAGTCGTACTATGCAAATCGTGAT
CGCTCGAAAACGTTTATGGTTCTTACTTGAAAATTTTGGCTCTTCCCTGA
AGAACCTCTGCCTGAACAGAGTGGCTTATGGCTTCCTCTCTATTTTCAAA
GAACAACCGGTCTTCAACTTTGAGTACAATGAGATAGAACAATCTTACTT
AAGGCGATGTCATAAAGATGGAAAATCAAATGAAAATAGTTAATTACAAA
TCTTGAGGAGGCTGTCAGGGTGGCTAAATTTCTAAATTTAAAAAGACTTC
AAGATTACATTGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCACGA
GTTCTTGACGAAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGA
CATGTTTTTGTTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTAAAAC
ACTTCGGTCTTATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATG
CGATATGAACTTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGC
CAAACATGTTTACGAGAGAAAGTTTTTCCGTGAAACTGTAGTTGGAATGG
AGATTCAAATGATTTTCAACTTTCTTGATTTGGAAGTATACGAAAATCGG
ATGGTTGACCTTGCACCTAAGAAAAACCCTATTTTTATGCCGAAAAACAA
TTATTTGACTTCTTTGGAAAAGTTTGTTGATTTGGAGTCGATATCATGCA
ATAAAGAGTCTGCTGATTGCGTCACGCTAGTCGTTGAAGAGAGAGAAATT
CACGTCAATTCTTTCCTCTTAACCAACAATTCTCCTGTTTTCAAAGCAAT
GTTGAGCTCAAATTCATTCAAAGAAGGTCAGAGCAAAAGGATTGAGTTAC
CAGGCAAGAATTTCAACCAAATCATTTATCTTCTACAGCATTTATATTCG
TCGAAACATATTGGAAATATTTATCATGGTCAAAAGAAAATTAAAAACAT
CAGAACCTGCTCGAAACGTGGTTTCCAAAATAAATGACGTGAAAACCGTC
CCAAATGAGAAGATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGACCA
AGATTGTGACGTCATCATTGAAGTCAAAGACAAAGAAGTCTATTTACCAT
TTACTTTCTTGAAAATGGCTTCGAAAGAAAATGTTTTACGGCCGTTTACT
GGTGGGAGATTGTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGCATT
GTCTTTTTACGTCCCAAAAATAAGCAAGGGTGATACCGTTGATTGTGTTC
GTGATCTATCACTGCTTTGCCGGGAGTACCAAATCGATTGGTTGACTGAA
AAAATCAAAACTTTTATCATCGAAGAAGGGTCAAAGAATACGGCTGACGA
AATCCTTCAATATCTCACACTTTCAGAGGAAGCGAACTTTGGACTTCCAT
TGTACGAAACTTTGGTGAATCAGTTACATGACTCGTTTCAAACCATTCAA
CTGTGTCCAAATTTCATGTCTTTGAGTCGTACTATGCAAATCGTGATCGC
TCGAAAACGTTTATGGTTCTTACTTGAAAATTTTGGCTCTTCCCTGAAGA
ACCTCTGCCTGAACAGAGTGGCTTATGGCTTCCTCTCTATTTTCAAAGAA
CAACCGGTCTTCAACTTTGAGTACAATGAGATAGAACAATCTTACTTAAG
GCGATGTCATAAAGATGGAAAATCAAATGAAAATAGTTAATTACAAATCT
TGAGGAGGCTGTCAGGGTGGCTAAATTTCTAAATTTAAAAAGACTTCAAG
ATTACATTGAAAAGGTCTGCTTGAGAAAAGCTTTTTACCATCCACGAGTT
CTTGACGAAAAAGGCATTAACGCTTTGAGAATCGCTCAAACCTACGACAT
GTTTTTGTTCTTAGAACAACGATGTATTTCTGAAAGTTGGCTAAAACACT
TCGGTCTTATCGCTAATCACGATTTTCTAGTCTTGAGCAACGACATGCGA
TATGAACTTTTAAAGAACACAGTTATACGTCAATTGGTGACTTATGCCAA
ACATGTTTACGAGAGAAAGTTTTTCCGTGAAACTGTAGTTGGAATGGAGA
TTCAAATGATTTTCAACTTTCTTGATTTGGAAGTATACGAAAATCGGATG
GTTGACCTTGCACCTAAGAAAAACCCTATTTTTATGCCGAAAAACAATTA
TTTGACTTCTTTGGAAAAGTTTGTTGATTTGGAGTCGATATCATGCAATA
AAGAGTCTGCTGATTGCGTCACGCTAGTCGTTGAAGAGAGAGAAATTCAC
GTCAATTCTTTCCTCTTAACCAACAATTCTCCTGTTTTCAAAGCAATGTT
GAGCTCAAATTCATTCAAAGAAGGTCAGAGCAAAAGGATTGAGTTACCAG
GCAAGAATTTCAACCAAATCATTTATCTTCTACAGCATTTATATTCGTCG
AAACATATTGGAAATATTTATCATGGTCAAAAGAAAATTAAAAACATCAG
AACCTGCTCGAAACGTGGTTTCCAAAATAAATGACGTGAAAACCGTCCCA
AATGAGAAGATGAAAGAAAAATTGGTTCCGTTTGATTTCGATGACCAAGA
TTGTGACGTCATCATTGAAGTCAAAGACAAAGAAGTCTATTTACCATTTA
CTTTCTTGAAAATGGCTTCGAAAGAAAATGTTTTACGGCCGTTTACTGGT
GGGAGATTGTACCTTGATGTGTCTTCAAAAAGTTTGGTTGAAGCATTGTC
TTTTTACGTCCCAAAAATAAGCAAGGGTGATACCGTTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045008XLOC_045008Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072527-proteinTCONS_00072527-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072527-exon-scaffold_79-1575043694:25835..26167TCONS_00072527-exon-scaffold_79-1575043694:25835..26167Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1575043694:21668..22399TCONS_00072527-exon-scaffold_79-1575043694:21668..22399Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1575043694:18778..20330TCONS_00072527-exon-scaffold_79-1575043694:18778..20330Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1510915933:25835..26167TCONS_00072527-exon-scaffold_79-1510915933:25835..26167Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1510915933:21668..22399TCONS_00072527-exon-scaffold_79-1510915933:21668..22399Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1510915933:18778..20330TCONS_00072527-exon-scaffold_79-1510915933:18778..20330Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1491911889:25835..26167TCONS_00072527-exon-scaffold_79-1491911889:25835..26167Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1491911889:21668..22399TCONS_00072527-exon-scaffold_79-1491911889:21668..22399Clytia hemisphaericaexon
TCONS_00072527-exon-scaffold_79-1491911889:18778..20330TCONS_00072527-exon-scaffold_79-1491911889:18778..20330Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_79supercontigscaffold_79:18778..26167 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.558407 0.502793 0.185477 0.358902 0.721007 0.502207 1.26857 1.29399 0.570874 0.558264 0 0.590518 0.646442 0.712023 0.32614 0.217278 0.133834 0.362613 0 0 0 0.25223 0.117521 0.470157 1.81837 1.62091 0 0 0.197877 0.316426
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072527 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top