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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072465 ID=TCONS_00072465|Name=TCONS_00072465|organism=Clytia hemisphaerica|type=transcript|length=794bp
AGAGATTTATCAACAACAATCACATCCCATTGATGTATCCTGGCGAACCA
CCAATTAATCGCAACCTAAATGTCGAAAGCCTCAAGGAGAAACAATGCCT
GGCGCTTGAACAAGAAATACTAAACGTGAAGCTCGATCGACTAATGTATC
CCCGGCGAAGGGGATTAATCCTGAAGCTGGTAAAGCTACAGTCAGACCTT
GCCCTTCTCCAGaagaaaaatgcagaaaaatcaaaagcaCGCAACGTAAA
GCCGTTAATCAACGCGAAGAAGCCAACAACGACGGAGCAAGAGCAATCCT
GGAAAACACTCATCGAGAGACTAACCAACCCTCCACTTCTCCAGTTCCCA
GATTTTAAGAAGAACTTCATCCTTAACACAGACGCCTCAGAAATCGCAAT
TGGGTACGTTCTCAGTCAATCTGTAAATGGTGACCACCCACATCCAGTCA
AGTACGGAGGGAGAGTTCTAAAAAACCCTGAACTTCGATACACAGTAACA
GAGAAGAAATTGCTGGCTTTGGTCTACTCGATTCGAGATTGCAACCAATT
CCTCAAAGATAAGCCTTTTAAAGTATTGACCAACCACAAACCTCTTACGT
ACGCACTGCAGTTCCGTGACAAGACCGGAAGAATCTCTCATTGGTCAGCC
ATGCTCCAAAAATACGTATTTACAATACATTACAGAAAGAGTTCAAAAAA
TAGTGCCGTGGACACAATGACTAGACCACCAATCCAACAAGCTGAACAAG
TCTATTCCGTGAACAGaaaccaaagaaaaaagaaaaaaaaaaaa Run BLAST on NCBI protein sequence of TCONS_00072465-protein >TCONS_00072465-protein ID=TCONS_00072465-protein|Name=TCONS_00072465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
RFINNNHIPLMYPGEPPINRNLNVESLKEKQCLALEQEILNVKLDRLMYP
RRRGLILKLVKLQSDLALLQKKNAEKSKARNVKPLINAKKPTTTEQEQSW
KTLIERLTNPPLLQFPDFKKNFILNTDASEIAIGYVLSQSVNGDHPHPVK
YGGRVLKNPELRYTVTEKKLLALVYSIRDCNQFLKDKPFKVLTNHKPLTY
ALQFRDKTGRISHWSAMLQKYVFTIHYRKSSKNSAVDTMTRPPIQQAEQV
YSVNRNQRKKKKKK Run BLAST on NCBI transcript from alignment at scaffold_77:441254..442047 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072465 ID=TCONS_00072465|Name=TCONS_00072465|organism=Clytia hemisphaerica|type=transcript|length=794bp|location=Sequence derived from alignment at scaffold_77:441254..442047 (Clytia hemisphaerica)
ttttttttttttcttttttctttggtttCTGTTCACGGAATAGACTTGTT
CAGCTTGTTGGATTGGTGGTCTAGTCATTGTGTCCACGGCACTATTTTTT
GAACTCTTTCTGTAATGTATTGTAAATACGTATTTTTGGAGCATGGCTGA
CCAATGAGAGATTCTTCCGGTCTTGTCACGGAACTGCAGTGCGTACGTAA
GAGGTTTGTGGTTGGTCAATACTTTAAAAGGCTTATCTTTGAGGAATTGG
TTGCAATCTCGAATCGAGTAGACCAAAGCCAGCAATTTCTTCTCTGTTAC
TGTGTATCGAAGTTCAGGGTTTTTTAGAACTCTCCCTCCGTACTTGACTG
GATGTGGGTGGTCACCATTTACAGATTGACTGAGAACGTACCCAATTGCG
ATTTCTGAGGCGTCTGTGTTAAGGATGAAGTTCTTCTTAAAATCTGGGAA
CTGGAGAAGTGGAGGGTTGGTTAGTCTCTCGATGAGTGTTTTCCAGGATT
GCTCTTGCTCCGTCGTTGTTGGCTTCTTCGCGTTGATTAACGGCTTTACG
TTGCGtgcttttgatttttctgcatttttcttCTGGAGAAGGGCAAGGTC
TGACTGTAGCTTTACCAGCTTCAGGATTAATCCCCTTCGCCGGGGATACA
TTAGTCGATCGAGCTTCACGTTTAGTATTTCTTGTTCAAGCGCCAGGCAT
TGTTTCTCCTTGAGGCTTTCGACATTTAGGTTGCGATTAATTGGTGGTTC
GCCAGGATACATCAATGGGATGTGATTGTTGTTGATAAATCTCT Coding sequence (CDS) from alignment at scaffold_77:441254..442047 >TCONS_00072465 ID=TCONS_00072465|Name=TCONS_00072465|organism=Clytia hemisphaerica|type=CDS|length=792bp|location=Sequence derived from alignment at scaffold_77:441254..442047 (Clytia hemisphaerica)
ttttttttttttcttttttctttggtttCTGTTCACGGAATAGACTTGTT
CAGCTTGTTGGATTGGTGGTCTAGTCATTGTGTCCACGGCACTATTTTTT
GAACTCTTTCTGTAATGTATTGTAAATACGTATTTTTGGAGCATGGCTGA
CCAATGAGAGATTCTTCCGGTCTTGTCACGGAACTGCAGTGCGTACGTAA
GAGGTTTGTGGTTGGTCAATACTTTAAAAGGCTTATCTTTGAGGAATTGG
TTGCAATCTCGAATCGAGTAGACCAAAGCCAGCAATTTCTTCTCTGTTAC
TGTGTATCGAAGTTCAGGGTTTTTTAGAACTCTCCCTCCGTACTTGACTG
GATGTGGGTGGTCACCATTTACAGATTGACTGAGAACGTACCCAATTGCG
ATTTCTGAGGCGTCTGTGTTAAGGATGAAGTTCTTCTTAAAATCTGGGAA
CTGGAGAAGTGGAGGGTTGGTTAGTCTCTCGATGAGTGTTTTCCAGGATT
GCTCTTGCTCCGTCGTTGTTGGCTTCTTCGCGTTGATTAACGGCTTTACG
TTGCGtgcttttgatttttctgcatttttcttCTGGAGAAGGGCAAGGTC
TGACTGTAGCTTTACCAGCTTCAGGATTAATCCCCTTCGCCGGGGATACA
TTAGTCGATCGAGCTTCACGTTTAGTATTTCTTGTTCAAGCGCCAGGCAT
TGTTTCTCCTTGAGGCTTTCGACATTTAGGTTGCGATTAATTGGTGGTTC
GCCAGGATACATCAATGGGATGTGATTGTTGTTGATAAATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072465-exon-scaffold_77-1491911889:441254..442047 | TCONS_00072465-exon-scaffold_77-1491911889:441254..442047 | Clytia hemisphaerica | exon |
| TCONS_00072465-exon-scaffold_77-1510915933:441254..442047 | TCONS_00072465-exon-scaffold_77-1510915933:441254..442047 | Clytia hemisphaerica | exon |
| TCONS_00072465-exon-scaffold_77-1575043694:441254..442047 | TCONS_00072465-exon-scaffold_77-1575043694:441254..442047 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:441254..442047 . |
Blast
The following BLAST results are available for this feature:
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