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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072445 ID=TCONS_00072445|Name=TCONS_00072445|organism=Clytia hemisphaerica|type=transcript|length=566bp CTTTCCATAATGTTGTTTGGTTCTAAGGGACAATCTGAATACAAAGTCCT CGGGCTTCCAGACCGTAAAAGTGGAATGACTTTCCAGCGAgggaaaacaa aagtttttgatatcaaaactcaaaatattgggaaattgaagaaaatccGG GTTATGCATGATCAGAGCGGCAAAGAGCCTGATTGGAAGTTAAGAAAACT AACATTAGAGAataaaaacagtcaagcgaAAAACACTAAATTCATTTTAC CTTGCAACCGATGGCTGTCCGAAAAAGAAGGTGATCACTCAACTGTCCGC GAAATACCTGTAGATCATAAGAAAACACCTGTATCATTGTATCGAATACA CGTCGAGACGGGTGATATGGAAAATGAAACCATCGATCCAAAATTGTTTG TCGATTTACACGGTACCGAAGGGGAGNGTATCGAATACACGTCGAGACGG GTGATATGGAAAATGAAACCATCGATCCAAAATTGTTTGTCGATTTGCAC GGTACCGAAGGGGAGACGGGAGAACGTCTGTTGAACACAAATGGGACGTC TTTTAAACGCAACACG Run BLAST on NCBI transcript from alignment at scaffold_77:449875..452535- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072445 ID=TCONS_00072445|Name=TCONS_00072445|organism=Clytia hemisphaerica|type=transcript|length=2661bp|location=Sequence derived from alignment at scaffold_77:449875..452535- (Clytia hemisphaerica) CTTTCCATAATGTTGTTTGGTTCTAAGGGACAATCTGAATACAAAGTCCT
CGGGCTTCCAGACCGTAAAAGTGGAATGACTTTCCAGCGAGGGAAAACAA
AAGTTTTTGATGTAAGTTGAGTTATAAGGTTGATAAATTTTTATGAAATT
CTTCAAAAAAAGGCTCTCTATAATGTTGTTTGGTTCTAAGGGACAATCTG
ACTACAAAGTCCTCGGGCTTACCGACCGTTAAAACTGGAATGACTTTCCA
GCGAGGGAAAACAAAAGTTTTTGATGTAAGTTGAGTTATAAGGTTGATCA
ATTTTTATAAAAATTCTTCAAAAAAAGACTGTTTGGTTCTAAGGGACGAT
CTGAATATAAAGTTCCAGTACCAAACTGGGCGACCGGACCGTAAAATTAG
AGCATGACTTTCCAATGATGAAAGTCTTTAACGTAAGAAAATCTATTCCG
TTTTCTATTGATTTCAGATCAAAACTCAAAATATTGGGAAATTGAAGAAA
ATCCGGGTTATGCATGATCAGAGCGGCAAAGAGCCTGATTGGAAGTTAAG
AAAAGTAAGTGTATGTTTTGCCGTTTGAAAATAAAAGTTTTTTTAAAATC
CTGTAATTTTTCTTCGATAAAAGTCAAAACTGAAAATCAAGAATTCATGA
ATACACCATTGTAATGTCTTCCACGGACCCAACAGCTGATTGGTTGAAAG
TGACGTATTGACTGATTTTACGTCACTTACAACCAATCAGCTATTGGGTC
CGTGATGTAATGTCGGAAGACATTGCAATGGTGCATATCATAAATACACC
ATTGTAATGTCTTCCACGGACCCAACAGCTGATTGGTTGAAAGTGACGTA
TTGACTGATTTTACGTCACTTACAACCAATCAGCTATTGGGTCCGTGATG
TAATGTCGGAAGACATTGCAATGGTGCATATCATAAATACACCATTGTAA
TGTCTTCCACCGACCCAATAGCTGATTGATTGAAAGTGACGTATTGACTG
ATTTTAATAACATAACATATAACATTGCAATGGTGCATATCATGAATACA
CGAACCAGTCTTCAAAGCGCGAGAAGACAGGATTAAAGATAAAATGACGT
CAAAAATGTCGATAGTAATTGCATTGACATTCTCATTTAACAAAGAACAT
TGACGTCATTTCCTTGCAAATACATTACCAGACCCCTACAGTCTACACGA
GGGCATATCTGGCGTCCATCAGAAACGTGAATAAAGCCTGCAATCATGGT
CGAAATTTTTTTGACATTTTAATGTATTTTAACGTTTTTCAGAATTTACA
GTTCGGGCGAGAATTGCTATTTTAGCACTTCCACTTTCTTTCATTGAATA
TTTCGATTTTAGAGGAGTTCGGTGGCTTCTACGCTATATAGTCCAAGCCT
TATTCGAGCTAAATTGAGCTTTTAAATCCTGAGATCCTAAGGTCCTAAGT
CTGAAGTCTCATGTTAAAACTCAGAGTTAAATTTCTCCTTTCCAACTGTA
GTTTGAGGCGCTTAAAAATCATTTGTGGTGTTTAAAATTTCGCCGGGAAA
TCCCCTTTGTCTCAAATATTTTGTTCATAATTGTGGAATACACGTGGACT
AAGTTGTAGCCTACCATTTTAAATATTAATAAATTTTTATTATACAGCTA
ACATTAGAGAATAAAAACAGTCAAGCGAAAAACACTAAATTCATTTTACC
TTGCAACCGATGGCTGTCCGAAAAAGAAGGTGATCACTCAACTGTCCGCG
AAATACCTGTAGATCATAAGAAAACACCTGGTGAGTTTTATTCCTCTACT
TTTTTAATCGGATTTATTTTCGGGAGATTTTATCTCCCATTTTTGATAAT
TTCTGCCTTTTTCGCAAAAATTAATCTCACAAAATCTTGTGAGATCATCG
AATCGCGAAAATTAAATCCACGTAAAATCATTCAAAACGCTGATTTGCAA
ATATAAAACCAGTTAAAATCACGTGAAAATTACCCCAATTAAAGTAAAAT
AGAAAACAAGGCTATAAAATACTTCTTCGAGAAACTTGACTCATTAGAGT
ATTTGAATAATACTAAATAAATTTGTGTATAAAATTGACATGAACGTGCT
TTTCTATTGACATGGACGTGGTATTCTGATGTTCTATTCTTGCGCGTTTT
GAGCTGAAGGTGTGCCGTGGAATATTTCAAAATCCTATCTAGGTCACGTG
ACATGTGTCACAATAAAACCAAAGCAACAATATTTTTTTGCGATATTCAA
TTCTTTTTGCTTGGAAAAGCTGAAAGCACTCCATCTAGCTCTTCGGGCTT
TACAGAAATCTGTGGTCAAAATAGCGTACATCTACCTCGTCCCAAAGAAG
TAAGGTTGGCAAACTGTAAGAGTCATTTCTTGGAAGAGCCAATCAATTTA
TTTTTCCGATACTCTCTTTCTTACAGTATCATTGTATCGAATACACGTCG
AGACGGGTGATATGGAAAATGAAACCATCGATCCAAAATTGTTTGTCGAT
TTACACGGTACCGAAGGGGAGNGTATCGAATACACGTCGAGACGGGTGAT
ATGGAAAATGAAACCATCGATCCAAAATTGTTTGTCGATTTGCACGGTAC
CGAAGGGGAGACGGGAGAACGTCTGTTGAACACAAATGGGACGTCTTTTA
AACGCAACACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00072445-exon-scaffold_77-1575043694:452425..452535 | TCONS_00072445-exon-scaffold_77-1575043694:452425..452535 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1575043694:451982..452068 | TCONS_00072445-exon-scaffold_77-1575043694:451982..452068 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1575043694:450756..450888 | TCONS_00072445-exon-scaffold_77-1575043694:450756..450888 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1575043694:449875..450109 | TCONS_00072445-exon-scaffold_77-1575043694:449875..450109 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1510915933:452425..452535 | TCONS_00072445-exon-scaffold_77-1510915933:452425..452535 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1510915933:451982..452068 | TCONS_00072445-exon-scaffold_77-1510915933:451982..452068 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1510915933:450756..450888 | TCONS_00072445-exon-scaffold_77-1510915933:450756..450888 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1510915933:449875..450109 | TCONS_00072445-exon-scaffold_77-1510915933:449875..450109 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1491911889:452425..452535 | TCONS_00072445-exon-scaffold_77-1491911889:452425..452535 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1491911889:451982..452068 | TCONS_00072445-exon-scaffold_77-1491911889:451982..452068 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1491911889:450756..450888 | TCONS_00072445-exon-scaffold_77-1491911889:450756..450888 | Clytia hemisphaerica | exon |
TCONS_00072445-exon-scaffold_77-1491911889:449875..450109 | TCONS_00072445-exon-scaffold_77-1491911889:449875..450109 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_77 | supercontig | scaffold_77:449875..452535 - |
Blast
The following BLAST results are available for this feature:
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