TCONS_00072436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072436
Unique NameTCONS_00072436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2302

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072436 ID=TCONS_00072436|Name=TCONS_00072436|organism=Clytia hemisphaerica|type=transcript|length=2302bp
TTTAATTGGACTTGTTCAAACTTAAGCAAACTCCTTTTGGTGGACATTAT
GACCCTTTTATTGTGAAATAATGATAGACTTTTAGGCCCTAAAATTATGA
AAGATTTATGAACTTACAGCCGATGAAAGAAATGACGCTGCCAACGATGC
ATAATTTGAACACGTCAGAATCTAACATTGTTGTTTGGAGAAAATGTACG
CCTTTCTGTGATAAAACTGTCGAATGTCCTGAACATCATGAACTCTTACA
AGCAATTGTAAATTGTACAGACCAATTAGGTCACTTATCGAACTTAGATG
GCTTGAAAGCCTGTATAGAGAAATATCAGAGTATGGGCTGGGATCGGAAT
GATACCATCCCAGACCCTGTTGCTTCGAACAGGTTACCGTTGATCCACTG
GGCAGCTTCTCTCGGTAAATGTAATGCTCTTGAGTGGATGCTAAGCAACG
GATTCGATTCCACCGTTACGATAGGAAGTTTAACAGAAAACGCTTTGCAC
AGAACTATATTATACCTTTATAAATCAAGGCCTAAATTTACAACGAAAGA
ACTGAaaccgaaattccgtaaaataTGTAATTTATTATCAAACTTAATGT
ATCATTCGGACTTAGGGAATGGAACTCCGTTACATTTAGCCGCTAGTTTG
TTATGTAGCTCAGAGACCAGGCTAGTTTTCTTTCAAACAGCAATTGAAGT
TATGGCCGCTCAGGCTAAGGAAATGAACGATTCGGATAGAATGGCGACTT
TAGACGCTAAAAATAACGAAGGAAATACTTGTTTGCATATACTTGCTGGT
GCTAATGAGAAAATCAAAGTTGATCACGTTTGTACCGCCATTTCCGCCCT
ACTTCAATCGGGCGCTGATAAGACGATGAGAAATGCAAAGGATCAAACAC
CCTTGGATATTGCCATTCAAAAAGGTTACAATAACGTCATCGATGAACTG
GTCAAGATAGTGAACCCATCAACGTCCTTGGTCAAAGAATCGCCTTCTTC
GTCTACATCTCATCACGATTCACGCTCCCTCATGACCATGGTCGATATGC
GAAGAGGTAGCCCGGTCTCCAACTCCATGATCAATCTCAATCGCTCGGCA
TACGGTTACACGGAACGCAGGCGTTCACGCAGTCGTTCGCCCATTCGGTC
ACCGCGCTCTGAACGTGAACGCGAATCACCGCCAATGGCCCACTCGAAGT
ATGAAGACTCAGCGAGGAACGGATTTCTCATTAAACAAGAGGACGAAAAC
GAAGTAGATAGCAGTTTGCAACCGACGAGTCCTGCTTCAGATGCCATGTC
TTCTATGTCCAACATCGATGTCAACTCACCACTACTGTCACACTTGGCGG
AGGCTGGTCTTTTGAGTGAAGTTTCTGATCTCCTGTCACGAGCCAAAGCA
CGCGATGAAAGCCAGTTGAAACGTTACCAACAACAAGCTAAAGACCTTGA
TACACAAATCATgtacaaacaaaaagaaattgaacGTATAAAATCCGAAG
TAGAAACTTTGCGTAAGAAACGCAATCGTTGCGATGACGAGACGGCGAAA
CTTAAGAAAAAACTCGCTTCTTGCTCGAACGCGATTCGCGAACTTCCTTA
CGGACAAAACTCGAACACGGGGGAAGCGCAATCAGTTGCTCACTCCCCTG
CTACGTAAATCTCTTTTatagttttacaaatttttagtttttatagaGGC
GTCTTCATAGTGTAAAACTTATTTTCCTTGTAACTTGTACAttttctttt
tgcattttttacaaacttatcggccctttttacactttttattcCTTGTA
AAAAGGAACGCGTGACCTTTCTGATACTTCACTTCATATTTGTAGTCTTG
ATTATCGCGCAGAACCGGTCTAACAGAAAATGACGTTGTTCAagtactct
caggtgcctaataaatgCCCCCCCTCCccgctttttaatttttatccaTT
TCGTCTTTTTTAAAAGAGGAACACCTTATTTTGTTCTGATTAGCCAGGTT
TTATTCTATAATTACCTCTTGCAGGtatttaaaggtataatttccAACCC
CTcgataaaaattttccaacctaTGAAGAACTTTCCGCGCGATGACGAGG
CTTTCATATTCGAGCATTACTTGATTGTCGCTTTATTTCAAAGAATACTT
TTTCTTTATGTGATCTTGTGCGATGTATttctttttgaacttttggcGCC
TGAGAAATTAAAGATTAACAGAGtcagaatatttttatttcgagatAGTA
TTGTACATAGCTGATGaatataatatttcttttcatttttaaagatattt
tt
Run BLAST on NCBI

transcript from alignment at scaffold_77:346178..359479-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072436 ID=TCONS_00072436|Name=TCONS_00072436|organism=Clytia hemisphaerica|type=transcript|length=13302bp|location=Sequence derived from alignment at scaffold_77:346178..359479- (Clytia hemisphaerica)
TTTAATTGGACTTGTTCAAACTTAAGCAAACTCCTTTTGGTGGACATTAT
GACCCTTTTATTGTGAAATAATGATAGACTTTTAGGCCCTAAAATTATGA
AAGATTTATGAACTTACAGGTAGGCTGCTGTTTTTTAATTTTAAACATGA
TTTTTAAAACACATGGAAAACACATATGGGGCCTAGAAAGCTAGTTAAGG
TTTTTTTTAGCTTTTTTTCCAAGTGTGAAAGTCTGATTTTGAGAGAAAAT
AGTTTTAAGTTCAACTATAGGTCTACATTATTTAACTTCATCACATGTGA
GTTGCATTTTCAAAAAAACATCAGGTATAAAGGTTTTCAAGCGTGAATTT
TTAGATTTGATGTTATTTCCGGGGTCTAAAATTTAAAGTGAATCCTTCAT
TAAGATGGGGGTCTTCCAACCTCAGAGGGGTTTTTTATTTGTGTTTTGTG
CCAAGGTTGGCCAATGATTTGATTTTCAAATGAATATTTTTTTTAAACCA
GAACTATCTCAAAATTGCCAGAAGAGTCGATTATTGTCAAAAAAGAGTTT
TTCTTGAATTTTTACATTTTTACATTTATTTGCCTTTTGGACCTACCCCG
GTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTCCGTTCGTCTGTTCG
TTATTAGCTTTCCTCATGATTGGCTCATTAGTTTTTTCTGATTTTTTGCA
CAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCAA
AAAAAAAAAAAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGG
ACTTTGTGAAAAATTAGGTCGTTAATTTCTTCTGATTTTTTGCATGAAAG
TAGGGTACCATCGTAGGTAAAAGATGGTTCAAGCAGATTTATGCAAAAAA
AATTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAAT
AAGCATACATCAATGTTCTTAGTCAAATTAATCAATTCTTTTTTTGAGAT
AGATGTTTTTTTTGCTCATGAGGGCTTACTTTTAAAGAATATGTGTGTTT
AGACATAAAATTTTGGTTGCTTGGCTTGTTTTTATAGAAAAACTGGCCAA
ATTCTATTATTTTTTTATAAGCACACAATCAATTACTTAGGTATTAGCTC
TTTTATTCTTTATGATTTTTTGCACAAAGATGCATAACTACCGGGTGTCC
CAGAAAAAAGTTCTGCTCTTTGAAGTGAATTTTCTCGAGTTCTATGAATT
TTTAAAAGATCAATTATTTTGCATTGGAAAGAGGAAAGATAAACTTAAAT
TTTGAGGGGTCATTTATCAAATTTGGTCAACTAGAATAAAATTTCACATT
TTGAAAAGGCTCAAAAACGTTGAAAATCGACCTATCAAATTTTATAACCT
AATTATTACTTTTTTGCAGGAATAAAGAGTTTAAAGTGGACANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTGTTTAATGCAAACCAG
ATAGGTCCATAGAAGTATTGCTTGTTAAAATATGGAGTGTATATAGGGGG
ATGCAATGTAAGGGGGCTCAGACCCCCTCTGCACACTGTTTAATTCATAA
ATGTATCACTTGTCTTTCCTAGAAGTCACCCTCTTGATCGACTCCCTCTA
TGATGCTTGGATACTACCGGATGGGTCGGTAGTACTAACATAATTTAAAG
TCCAAATATCTTAGAAATGGTTAAAGGATGTAACTAAAATTCTTTAACCA
GGTATTATATAGACACTTTAGACTATTATTCTCTATAAGTTTTAATAAGC
AAAGTTAATTAAAAAATAAATCACAGTAGTGATTTTATTGAATGCCCCTA
ATTTTGAAATGTTGCAAAANAAGGATGTAACTAAAATTTTTTAACCAGGT
ATTATATAGACACTTTAGACTATTATTCTCTATAAGTTTTAATAAGCAAA
GTTAATTAAAAAATAAATCACAGTAGTGATTTTATTGAATGCCCCTAATT
TTGAAATGTTGCAAAATTGACGTCGAAATTACGTATTTAAAAGTAGCTTA
CGTAATGCTACAGCTTTTTTATTAGTTTATAGTTTTAGTATATAATTTTA
TATTTATTAGTATATAGTTTTGTTACCCTTGCTTTGTCATTTTGTATATC
CAGTGCTTTTACAGCTTCATGAGTTTCATATTTGTTTCGGATAGTCACTA
AAGGGTTCAGGTTTTCTGCTTTAATTATTTCAATGTAATGTTCAATGTTC
TGTAGATTAACTATAAAAGTATCAATTGTTCTTTTTTTAAGCAAACGATC
TAATTCTAAAAAAATTAAAATCACATGTATCTATGTTTTTCTGTCTCTTT
AAAGATCAGCCATGTCCAGTTTGCTGGTCACTGCATTCGTGCATTCGTCT
GCATTCTTCTGAGGGAAGCCTTTCCCTCTCTTTTTCTTATGAAGCCCAAG
GGAGTTGCTCAAGAGAACATAGAATTATTTTTTAACTGCCACAGTGAACA
GGACACTGCGCTTGAAACCATGAAAAACCATGGTAAACCATGGTAACTGT
CATTTTTGATACCAAATGATCGAATCCACCAACCCGACTAGAGTTATAAG
GTTCCTTTCTGAGGAATAGTCTCTTTGGTTTTTGGGAGCTTTACCAAAGA
AAAGTTATAGAACTTGTTGTTTTCAAATTAAGTCTGTTTTCCATTGATTT
TCAGACCTTACAACGAATTACACAGCTATGTCTGCACATAAGGGGTAGTA
ATATTTGATTTTTAATAATAAGAAGGGGTAAACTGATCAAAGGGAAATTA
AAGGCTATTAAGCTATTAAATTGAGCCATTTGATTTCGAAAGCTTGAAAT
GTTGATATATTTGTTGTGCGCTTTTTAACCTTTTAGTCCACTGCATCCTA
TTGGAGCTTTATTTATTTACATGTGGATGATGATATGGAGCTCACAAAAT
ACTCCTGACTAATGGTCTGTGCCCAAAGAAACAGGGCCCAATTCACTCAA
GAAGTTGAGACCATCCTTTTAACAAGCATTTGGAAAGCTTACGATTGGTT
TTTAGGAGCTACACTATTTCAAAGCTTTAAAAAATAAAGAAATTTCTTTT
CATCTCTTCGTGGCTTTTTCTTAATTATTTAATTTCCTTGTAACTATTAA
AAGTGTGTATATTACTATTGACGAGGTGACGTCAAATTTAACCTTGCTTT
TGGTAAATCCAAATATTCTTTCTCCATCTGCCACACTTCATCGCTTCCCA
TTTATTTTCAATGTTTACTTTTAGGAAGNGTAAATCCAAATATTCTTTCT
CCATCTGCCACGCTTCATCGCTTCCCATTTATTTTCAATGTTTACTTTTA
GGAAGAGGGACTAGTTTATAGAATAGATCGGAGGAAGGGATAGGACCAGC
CCCTTCCCCTTAACACTTCCCTATTTTCTTCTTCGGTCGTTGAATAGAAG
ATTTCGAAAGGAGACCCTCCTTCTTTTAAACGTGATATAAATTATTCATA
CATCTGACGATCTTTTTCGATTGATTGAAAGGATATTGGGAAGAACCAAA
GTTTTTTTTTTAGCTCTGTTCACTTCTGTGGGTGCATGGGAGTTTTTCAA
CACAAATTTGCTGACGATTCCTGCTCACGTCATCTTACATGCTTTTTTAG
GTTTCTTGTATTTTTATATGTTTGTCCATACAGTTTACGCTCTCTGATTC
CATTTTCAAGGGGAATCGGATTTTGATTAAGAGAATTATCGAATAGTAGA
GCGTCGTTTATAAGTGTTTCTTGTTGAAGGTGGTTTTCAGTATGGAGTGT
ATCGAATAATAGAACGTCGAATTAGAGAGCGTCAGCTGTATTGTAATGAC
CAGTGGCTTGAAATCTTCACGCTAGATTTTGAATCAATGTGAATGACAAT
ATTTTCTGTGATAATCTCGGATAATCTAAAAAGTATTACTCGTTGAAATA
TTTTAATGAGGTGATGCAGAGGCTGCTTTTTGTGGTATTTTTTTTCTAGA
TCACAAACAAGGCCTGACCTGGTAAGCAAATATCATCTATGATTGATGCC
TATAGGAATTTATTATTATACAGTTCTAGTTAGAGCAAAGAAAACAAAAC
CTGAATTTTCAAAGTTTCATCAGAGCTCTCAGGGAATATCTTTTCAATCT
TGTTTAGTAAGATAGAAGTCTTACTTCTCTCTCAGAAGCCTCTCTATGGT
CACATCCTAATCCTCTCGTCAAAACGGAGGAACACAATCTCAAATTTTGC
TATCAGAGAAAGAGGAGGTCAGGGTCACAATAGAGAGAGCATGTTACGTA
TTTTCCCTCCCTCCACCGTACTGTTATTTGATTGATCACCTTTTATCACC
ATGCTACATCAAGAGGCTTTGAGGGGGAGAACTCGTCTCTCTACCCTTTT
GTGTGAAGACCTTCTTTCTTGCTGTTCGTGAGGTCGTATGTCTCCTATTA
CTACGTATGAATGAAGGAACGGTTTCGATAGGGAAAGCCTCTTTCCTGCC
TGAATTTTCTCTATTTCTCTCTCTTTCAACGGTCTCTGAGAATCTGTCTT
GTAGTCAAGGGTTCTTTTACAGGGCAGAAAGAGCTTGTTGACTGGATTTT
CATACTTTTCATTTTATGTTTGATTCTGTTTTCAAGTTTTGTTTTAGGTT
ATGGATCTTGTAACTATATCTCTTGATTGAAGTTATGTGATTTCTTTATG
TAAGGTGTAAACAAAGGAGAAAAACTCTGCAGTCGAAAGTAGTGTAAATA
AAGTGTGAAGAACAATGCAAAATGAAGATGAGTATCTAATGGCGAGCTCA
CGTCATGACCATTGTTACCAAGGCTCAACTTGCTTCTTTCAGTAAACATC
GTGTTGTTATGAAAAACGTTCGGTCGTGAGTGTCAGGAGGTTGGCTCCTA
TTTACTATCATACAAAAGAGGTGTCAAACATTGAAATTCTTCAACACGCG
CTTTCCATAATTAACTATCATTAGATGCTCATTACTTTGAACGAGGGTCA
TAATAATTATCATCAACCACCTTTTGAGTTGTTATCTTGAAACATATGTC
GTGATTTGTTCTTCTGCTGTTTTTTTTTGCGTTTTTGATGACAATGGTAT
TTTCTGGGGAGATGGATTTTATCAGCACATGTCACATCACAAAACTCAGC
CCATGGGTTAGTATCATTTTTCAATTCTTGAAAGGAAAATAATTTTGCGT
GTAACACAGGGGGTTTGAAGATGTATAACCAGAAAGCTGTGTTTTCTCAC
GGTCCTTCTGATTATGAATCAGACCGAAGGTAGTAGAAGGCAGCTGTACA
CCTTTTCGGGAGGATGGTTGGTCGGCCATTCGGTATGTTTTTTGTTTGGT
TAGAGCGTAGAGGTGGTTCGTGGTTGAATGTTCGTTATGCAGATTGTGAG
TGAACCTTTTCTTCTTCTCAATGCTTGTACATGTGTTAGAAATAAAAGTT
CAGGCAGCTCCTCATTTCAATCTCGTTATATATGAACTGATTGTTGAAGT
TTGTGATTGAATGTTCTTCGTTGATTTTGTGAAAAATATGAGACGCTTTC
AAGGAGGTCATTTTCATCAGGTATTCATCTTCTTTCAAGTCATCTTATAT
TTCACCCATAGTTATTGAACAATTAGTTTTATGTAAAGCATTGTATATAG
TATAGTTAAGGTTTACACAATTAAAAAGTATTTGACCCTTATGTCCGCCT
TCGACACGGAATTGATGTCATCTTATTTGATTACCTTTTTCCTTTTTAAC
TGAATATTTTGCGGTCGTCAATATTAAGTTAACGAGTTTACATGTTATCC
GGAGTAGTTGAATGTCCAGTCGCCCACTTGAAAAATGTTTTGGTTACTTT
AAGGGTGCGGAAATCCTTTGCTTCCGATGTCCGAGTGACGTGTACATGAA
GTCTTAATTATATCAGCTTTCCATTAAATGGTAATGACCCTCACCTTAAC
CGGATGTTGTGTGGTTGAAGTGCTTTGTCTCTTCGTATTATTATTAGACG
TAACCTTACTGAAAGGGGCTGTTTATGGTTTGTAATGAGACTTGTACTAT
CAGTATTGGGTTATTCCTCTTCATGTTGCTATGAGGATATTTTCTCAATT
TTTGAGATACTGTTTGAGGATCATCTTTGGTATTTGTTAATTGAACGAAA
TTGAAAACATTTTTTATCTATCATATGGTTATGTGGTCATTTGATTTATG
AAAATAGGCGGGGCTAGGAGAGTTTTGCAAACGGACATATAACTATGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAGGGGGGATCAGACCCCTTTCCGCACTATGGGTAGGTTGTGATAA
GAGAGATTTGATGTGAACTAATTTGACCCAATTCTCTTTTCGTTTCAGCC
GATGAAAGAAATGACGCTGCCAACGATGCATAATTTGAACACGTCAGAAT
CTAACATTGTTGTTTGGAGAAAATGTACGCCTTTCTGTGATAAAACTGTC
GAATGTCCTGAACATCATGAACTCTTACAAGCAATTGTAAATTGTACAGA
CCAATTAGGTCACTTATCGAACTTAGATGGCTTGAAAGCCTGTATAGAGA
AATATCAGAGTATGGGCTGGGATCGGAATGATACCATCCCAGACCCTGTT
GCTTCGAACAGGTTACCGTTGATCCACTGGGCAGCTTCTCTCGGTAAATG
TAATGCTCTTGAGTGGATGCTAAGCAACGGATTCGATTCCACCGTTACGA
TAGGAAGTTTAACAGAAAACGCTTTGCACAGAACTATATTATACCTTTAT
AAATCAAGGCCTAAATTTACAACGAAAGAACTGAAACCGAAATTCCGTAA
AATATGTAATTTATTATCAAACTTAATGTATCATTCGGACTTAGGGAATG
GAACTCCGTTACATTTAGCCGCTAGTTTGTTATGTAGCTCAGAGACCAGG
CTAGTTTTCTTTCAAACAGCAATTGAAGTTATGGCCGCTCAGGCTAAGGA
AATGAACGATTCGGATAGAATGGCGACTTTAGACGCTAAAAATAACGAAG
GAAATACTTGTTTGCATATACTTGCTGGTGCTAATGAGAAAATCAAAGTT
GATCACGTTTGTACCGCCATTTCCGCCCTACTTCAATCGGGCGCTGATAA
GACGATGAGAAATGCAAAGGATCAAACACCCTTGGATATTGCCATTCAAA
AAGGTTACAATAACGTCATCGATGAACTGGTCAAGGTATTGTTTGATAAC
TTTGAAATTTACTTTATCTGACATGTTCAACTCTTCGAATTGGCCGAATC
CTGGACATAAATTGGTAACCTGAAACAATTAAAGTACTCCCCCTTATTGC
ATTATGGAATATACCTAAAAGAATTCTCCAATCTTTTCTAAAAATTATTA
AGTCCAAAATTTTACGTTGACTTTTACTATGTTCTGATTTTCTTTTCTGT
TTTTCAGATAGTGAACCCATCAACGTCCTTGGTCAAAGAATCGCCTTCTT
CGTCTACATCTCATCACGATTCACGCTCCCTCATGACCATGGTCGATATG
CGAAGAGGTAGCCCGGTCTCCAACTCCATGATCAATCTCAATCGCTCGGC
ATACGGTTACACGGAACGCAGGCGTTCACGCAGTCGTTCGCCCATTCGGT
CACCGCGCTCTGAACGTGAACGCGAATCACCGCCAATGGCCCACTCGAAG
TATGAAGACTCAGCGAGGAACGGATTTCTCATTAAACAAGAGGACGAAAA
CGAAGTAGGTTTCCTTAATTTTAAAGGCAGAAACCTTAGCGATTTTTTAG
TTTTGGCTGCGAAAGTTTCTAACAAGCTAAGTAAAAATTCTTTTTTCGTT
TGATTTCGCATTATAACACTGAACAGTGCGAAAAAAGTTACAAATGGATA
AACGATAAAATGTCAAAACTATTGTCCATGAATGATAAATAGCATTATTG
GGAAAAGGTTGGGACCCTTGTTTACATGATCTGGAAATAGTGGTACAGTG
GCATTAAAATAGTTTCTTCTCCATTTAGGTAGATAGCAGTTTGCAACCGA
CGAGTCCTGCTTCAGATGCCATGTCTTCTATGTCCAACATCGATGGTGAG
TAAAGACGGAGAAATGGAGCGTTTGCCTGTTTTACCGTTTATAAGATAAC
TAAAGGTTTTTGAAAATACTGCTCAGCTGCTCATGCCTGGTTAGGTCCCT
TGATCTTCACGATTGTAGCTTTCAAGGCAGGTCTGACCATGAACAGTCAT
CAGTCATCATTAAATTGTATCTTTTACATTAGATTGAAAGTTACGTTTTT
CTGCTCCAGCGGGAGTAAGTAGAGCCTTGCAGTTGCCATAACCTTGATAA
TTAAATTTTACCCTTTTTTTCAGTCAACTCACCACTACTGTCACACTTGG
CGGAGGCTGGTCTTTTGAGTGAAGTTTCTGATCTCCTGTCACGAGCCAAA
GCACGCGATGNGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTT
TTGGCATTTTCTCGAGATTTCATCATTAGTTTTTTCTGATTTTTTGCTCA
AATATGCGTATTAACAATGCCCAAAACATGGCCGAGTCCGATTTTTAAGA
AAAATTTTTTTCCGGCGGAAAATGCCTGAAATATGCCGGAAATCGCCGTT
TTTGCAGATTTTCATCGGACTTTTTCCTTATAATTGGTTGTTTTTTCATT
CAAAAACATTATTAATAGCAATGTCCACCATCAAGCATGTTTCAATTTTC
AATAAAATTGATTTTTGAAGCCGGAGCTATTTAAAAATCGCCGGAACAAC
CTANNNNNNNNNNGACAGTATTTCTTGAATTTCTCGAGCTGTACTTTATA
TTTTTTTATGAAATTTTGCACACTGATGCAATATGACAATACCTAAAATG
TGACAGAGCCCGATTTTAGAAAAACATTTTTTTCTGGCCGAAAATGCCGG
AAATATGCCGGAAAAGCCGGTTTTTTACATTTTCTCGAATTTTCATCAAA
AGTTTTTTCTGATTTTTTGCAGAAAAATGCGTATTCCCAATGCTTAAAAC
ATGGCTGAGTTTTTTTGATTTTTGAAAAAAATTTTTTTTTGGTTGAAAAT
GCCGGAAATCGCCGTTTTTGCAGATTTTCATTAGATTTTTTTCTTGTATT
TCACTCAAAAACATTATTGATAACAACATCAAGCATGATTCAATTGTCAA
TAAAACTGATTTTTGCGACCAGAACTTTCTATTTATTTTTCCCCTACAAC
CCTTCCCTCTCCCCCATCAACAATCAATGATGAATTTATTGCGTTATGCA
TTTTCGCTAAACGATATACTTTTTGACTGATTTTTTTCTCCTCGCATTTC
TATCCAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTCG
TTTGATTTCGCATTACAGTGGAACCTCTAATTAGCGGACACCATCGGGGA
AAGGGGTTAGTGTCCGCTAATTAGAAGTGTCCGCCTTTTAGAAACTTTTG
ATCTCGGAGCTCCAATTTTGAAATTAAGCCATCCCAGGGTGTCGAAAATA
CAAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTACTT
ATCTGCAGACACTAGGCCCTAGAAGAACAAGAGAAAGGTTATTAAAACGC
AACAATTTAGTTTTTAACAAATAAAAGAAAATCAGTGATTTACGATTTCT
TTGGCCCACCTAAATTCGTTGAATGGGTCAAGAGAAAACTGGAAATTTAT
AGAAATAATTTGAATGATAAGACTAATAAGTGCTCGAAATAAAAATATCT
AAAATTTTTTTTTTCGATTTTGGACGTTTGTGACCAGTTTGATATTCAAT
GTCCGCTAATTGGAGAGCTAAATAGGGGTTTTGGTCATTTCGTGCGAAAA
AATTTGTCCGCTAATCAGAGGGTCCGCTAATTGAGTGTCCGCCTTTTAGA
AACTTTTTTATGAGGATTTGACTAGGAAACGGCCGAGGAAAATATAATTG
TCCGCTAATCAGAGGTGTCCTTCTTTTAGAGTGTCCGTTAATTAGAGATT
TTACTGTATAACACTGATATGAACAATGCGAAAAAAGTTACAAATGGATA
AACGATTGGGACCCTTGTTTACATGATCTGGAAATAGTGGTACAGTGGCA
TTAAAATAGTTTCTTCTCCATTTAGGTAGATAGCAGTTTGCAACCGACGA
GTCCTGCTTCAGATGCCATGTCTTCTATGTCCAACATCGATGGTGAGTAA
AGACGGAGAAATGGAGCGTTTGCCTGTTTTACCGTTTATAAGATAACTAA
AGGTTTTTGAAAATACTGCTCAGCTGCTCATGCCTGGTTAGGTCCCTTGA
TCTTCACGATTGTAGCTTTCAAGGCAGGTCTGACCATGAACAGTCATCAG
TCATCATTAAATTGTATCTTTTACATTAGATTGAAAGTTACGTTTTTCTG
CTCCAGCGGGAGTAAGTAGAGCCTTGCAGTTTCCATAACCTTGATAATTA
AATTTTACCCTTTTTTTCAGTCAACTCACCACTACTGTCACACTTGGCGG
AGGCTGGTCTTTTGAGTGAAGTTTCTGATCTCCTGTCACGAGCCAAAGCA
CGCGATGAAAGCCAGTTGAAACGTTACCAACAACAAGCTAAAGACCTTGA
TACACAAATCATGTACAAACAAAAAGAAATTGAACGTATAAAATCCGAAG
TAGAAACTTTGCGTAAGAAACGCAATCGTTGCGATGACGAGACGGCGAAA
CTTAAGAAAAAACTCGCTTCTTGCTCGAACGCGATTCGCGAACTTCCTTA
CGGACAAAACTCGAACACGGGGGAAGCGCAATCAGTTGCTCACTCCCCTG
CTACGTAAATCTCTTTTATAGTTTTACAAATTTTTAGTTTTTATAGAGGC
GTCTTCATAGTGTAAAACTTATTTTCCTTGTAACTTGTACATTTTCTTTT
TGCATTTTTTACAAACTTATCGGCCCTTTTTACACTTTTTATTCCTTGTA
AAAAGGAACGCGTGACCTTTCTGATACTTCACTTCATATTTGTAGTCTTG
ATTATCGCGCAGAACCGGTCTAACAGAAAATGACGTTGTTCAAGTACTCT
CAGGTGCCTAATAAATGCCCCCCCTCCCCGCTTTTTAATTTTTATCCATT
TCGTCTTTTTTAAAAGAGGAACACCTTATTTTGTTCTGATTAGCCAGGTT
TTATTCTATAATTACCTCTTGCAGGTATTTAAAGGTATAATTTCCAACCC
CTCGATAAAAATTTTCCAACCTATGAAGAACTTTCCGCGCGATGACGAGG
CTTTCATATTCGAGCATTACTTGATTGTCGCTTTATTTCAAAGAATACTT
TTTCTTTATGTGATCTTGTGCGATGTATTTCTTTTTGAACTTTTGGCGCC
TGAGAAATTAAAGATTAACAGAGTCAGAATATTTTTATTTCGAGATAGTA
TTGTACATAGCTGATGAATATAATATTTCTTTTCATTTTTAAAGATATTT
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044961XLOC_044961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072436-exon-scaffold_77-1575043694:359361..359479TCONS_00072436-exon-scaffold_77-1575043694:359361..359479Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1575043694:350495..351331TCONS_00072436-exon-scaffold_77-1575043694:350495..351331Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1575043694:349972..350272TCONS_00072436-exon-scaffold_77-1575043694:349972..350272Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1575043694:349635..349697TCONS_00072436-exon-scaffold_77-1575043694:349635..349697Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1575043694:346178..347159TCONS_00072436-exon-scaffold_77-1575043694:346178..347159Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1510915933:359361..359479TCONS_00072436-exon-scaffold_77-1510915933:359361..359479Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1510915933:350495..351331TCONS_00072436-exon-scaffold_77-1510915933:350495..351331Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1510915933:349972..350272TCONS_00072436-exon-scaffold_77-1510915933:349972..350272Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1510915933:349635..349697TCONS_00072436-exon-scaffold_77-1510915933:349635..349697Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1510915933:346178..347159TCONS_00072436-exon-scaffold_77-1510915933:346178..347159Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1491911889:359361..359479TCONS_00072436-exon-scaffold_77-1491911889:359361..359479Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1491911889:350495..351331TCONS_00072436-exon-scaffold_77-1491911889:350495..351331Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1491911889:349972..350272TCONS_00072436-exon-scaffold_77-1491911889:349972..350272Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1491911889:349635..349697TCONS_00072436-exon-scaffold_77-1491911889:349635..349697Clytia hemisphaericaexon
TCONS_00072436-exon-scaffold_77-1491911889:346178..347159TCONS_00072436-exon-scaffold_77-1491911889:346178..347159Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:346178..359479 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.96263	1.0923	9.25249e-07	0.452394	10.0762	6.46009	3.00479	4.35406	1.50498	0.000515465	1.71811e-10	2.53354e-09	0.0462515	1.21092	1.8906	1.09217	1.72386	1.18992	2.59041	3.83303	4.21902	1.29091	3.91831	3.52783	1.57577	3.07578	0.403141	0.239197	2.34439	3.81055
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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