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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072417 ID=TCONS_00072417|Name=TCONS_00072417|organism=Clytia hemisphaerica|type=transcript|length=550bp
GtggaaatttgttaaaaatcagCGCTGGACGCGTAGCCTTCTAGTATAAG
AATTATgcaattgtcaatatattttctttttcagttagaaaaatactaaa
atatcACTAAAATATCTCACACGGGACCACGGGACGAAACGATGTAAACA
ATTGAAAGATTACTCAAATTCAAAGCGATGAAACAACACGAACACCCTCG
CGCCATCCAGGAATATTATGTTGATGGCAGCTTGAAAATGAGAAAaatat
CGCTTGACTTAAAGACGAAGGGCCCGATGAACCGTCCGTGACAGACAGTA
TTATCGTCAAGCTGTGAAGTAAACAGTGATGGTAGTGTTATATTACCCTA
ATTGTAATTTATCGAAAGTGTACGTAAGGtaaaaaaagctaaaagaaTAA
AAGCTTATCTggctaaaaaatataaaagccaTGGATTATTTTACAACTAG
AAATATCTTTGTcttcttttcgtttttcttctaGCGCCGGACCAGATTTC
TAGATAGAGATAAATACAATATATAGAGTCCCTCTAAAAGCACCCCGTGC Run BLAST on NCBI transcript from alignment at scaffold_77:212050..213403- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072417 ID=TCONS_00072417|Name=TCONS_00072417|organism=Clytia hemisphaerica|type=transcript|length=1354bp|location=Sequence derived from alignment at scaffold_77:212050..213403- (Clytia hemisphaerica)
GTGGAAATTTGTTAAAAATCAGCGCTGGACGCGTAGCCTTCTAGTATAAG
AATTATGCAATTGTCAATATATTTTCTTTTTCAGTTAGAAAAATACTAAA
ATATCACTAAAATATCTCACACGGGACCACGGGACGAAACGATGTAAACA
ATTGAAAGATTACTCAAATTCAAAGCGATGAAACAACACGAACACCCTCG
CGCCATCCAGGAATATTATGTTGATGGCAGCTTGAAAATGAGAAAGTAAG
TGATTATACATCTTGACTTGTTCAACCCACAAACCAAATTCTTGCAAATC
CATTAAAGGGTAAACTTCCGTGCTTCAATGTCTCAGAGTGTTTGTGCCCG
TTCCCCGTTTATTGATTGTCGAATTTAAAGCAGAAGAAAANCTGTGCTTC
AATGCCTCAGAGTGTTTGTGCCCGTTCCCCGTTTATTGATTGTCGAATTT
AAAGCAGAAGAAAAATTTCCGGGTATAAGTTTGAACAACAATCACGTTAA
ATTTTGAACATTTGACTTGGAATTTAATTAGATGGAAAAACTTCCATGGT
TTGAGAGATTGCAAAATATATGTGTCAAGGTTATTTGTGCCTTTTTACTT
GACGTTTGTCAGCCTGTTAAAAAGCAACTATCATTCTCTGTGCTATAACT
TCATTACTTTTACTCCAAGACTGGTAGCTTTTATGTGACAGGGGTATATT
TTACTGAGACAGGGGTATATTTAGAATAGAGCCTATCCCAGGGTACTCAT
TTTTAACGGACAAGGCAGGCCCAGTGAGAATCCTATCCATTAGAAAAAAT
CGCCATCCTATATGGAAACTTCACTTGTATGTAAAAGACAAGTAATGAAT
CTAGTAATTCAGACTGGATCTCTGTACTATTATCGTAAAATCTAAATCCA
CTAAAAACAGACCTTTTTTCTATTGGTTTTAATGTTCTTTTATGTCCCTT
TCCTAACGGGCTAATAAACGACTCGGACTTTTTGAGACAGGGACGTTCCC
CTCGCAAAAATGAAAAATGTATAGCAACGCTTCCATTTTTTTTCTTCAGA
ATATCGCTTGACTTAAAGACGAAGGGCCCGATGAACCGTCCGTGACAGAC
AGTATTATCGTCAAGCTGTGAAGTAAACAGTGATGGTAGTGTTATATTAC
CCTAATTGTAATTTATCGAAAGTGTACGTAAGGTAAAAAAAGCTAAAAGA
ATAAAAGCTTATCTGGCTAAAAAATATAAAAGCCATGGATTATTTTACAA
CTAGAAATATCTTTGTCTTCTTTTCGTTTTTCTTCTAGCGCCGGACCAGA
TTTCTAGATAGAGATAAATACAATATATAGAGTCCCTCTAAAAGCACCCC
GTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072417-exon-scaffold_77-1575043694:213159..213403 | TCONS_00072417-exon-scaffold_77-1575043694:213159..213403 | Clytia hemisphaerica | exon |
| TCONS_00072417-exon-scaffold_77-1575043694:212050..212354 | TCONS_00072417-exon-scaffold_77-1575043694:212050..212354 | Clytia hemisphaerica | exon |
| TCONS_00072417-exon-scaffold_77-1510915933:213159..213403 | TCONS_00072417-exon-scaffold_77-1510915933:213159..213403 | Clytia hemisphaerica | exon |
| TCONS_00072417-exon-scaffold_77-1510915933:212050..212354 | TCONS_00072417-exon-scaffold_77-1510915933:212050..212354 | Clytia hemisphaerica | exon |
| TCONS_00072417-exon-scaffold_77-1491911889:213159..213403 | TCONS_00072417-exon-scaffold_77-1491911889:213159..213403 | Clytia hemisphaerica | exon |
| TCONS_00072417-exon-scaffold_77-1491911889:212050..212354 | TCONS_00072417-exon-scaffold_77-1491911889:212050..212354 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:212050..213403 - |
Blast
The following BLAST results are available for this feature:
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