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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072392 ID=TCONS_00072392|Name=TCONS_00072392|organism=Clytia hemisphaerica|type=transcript|length=859bp
AAAGGTTCGAAACAATTAGCATCAAATACAAATAACTATGAGGggaattg
aaaaattattggaaTATTGGAATACGAGTTCTATCGAtgaaagaaatata
attttcaaatgcATTGTTAATCTAGGAGGAAGTGCCCTGATGCcatgaaa
aagaacaaaaaactgttaaaataccAGATAATAGTTTTGAAAGGATTATA
GCACCAAATACAAGCAACTATGAAGGGAATTAGAAAATTACTGGAAAATA
TTGGAATACTACATGAATGAAAAGAATATTATAATAATACGACTGATTCC
CTAATCacaaccaaaaaagaaaaacttcctCGTCTTAAAAGGTATAAATA
GTTGGCAGAATTTCCAGAAAATCATCatctttcaaattcatcatTTGACA
AGAAGAAAACAAAGCAACATCAGAATGAAGATTTGGAAAGTTTTATTACT
TCTATCTTTCTTGGCTGCCACAGTTTACTGTGAAGAGAGCCAAGAAGTGG
AAGAAATTCAAGATGAGCCAATGGAAGTTCAAGATGAACCAATGACAGCT
CAAGAAGATGAAGTTGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGA
AGAAGACattgaagaaattgaagaaaatgACGCTGCCAAAAAACCACCTA
AGAAGGCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATGCTGGA
GAATGCAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTCAAGAA
AGTTTGCGTCCACAAAGTCAACTACAAATGTAAGAAATTGCGAATCCAAA
AATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCCGATTC
TATTTCAAA Run BLAST on NCBI transcript from alignment at scaffold_77:14478..15738- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072392 ID=TCONS_00072392|Name=TCONS_00072392|organism=Clytia hemisphaerica|type=transcript|length=1261bp|location=Sequence derived from alignment at scaffold_77:14478..15738- (Clytia hemisphaerica)
AAAGGTTCGAAACAATTAGCATCAAATACAAATAACTATGAGGGGAATTG
AAAAATTATTGGAATATTGGAATACGAGTTCTATCGATGAAAGAAATATA
ATTTTCAAATGCATTGTTAATCTAGGAGGAAGTGCCCTGATGCCATGAAA
AAGAACAAAAAACTGTTAAAATACCAGATAATAGTTTTGAAAGGATTATA
GCACCAAATACAAGCAACTATGAAGGGAATTAGAAAATTACTGGAAAATA
TTGGAATACTACATGAATGAAAAGAATATTATAATAATACGACTGATTCC
CTAATCACAACCAAAAAAGAAAAACTTCCTCGTCTTAAAAGGTATAAATA
GTTGGCAGAATTTCCAGAAAATCATCATCTTTCAAATTCATCATTTGACA
AGAAGAAAACAAAGCAACATCAGAATGAAGATTTGGAAAGTTTTATTACT
TCTATCTTTCTTGGCTGCCACAGTTTACTGTAAGTACTTTGAATTTGTTA
CTGAAACTGATTGTATAAGAAATAATTTCTCATTACTGAAAAGCGGGCGG
GTAAAAGGACGTTTTGAAATAGCGGGGAAATCAATTGAAAATGATTGATC
TTGTTTTGATTATACTGAAGAGCATGATGATTTTAAAAATAAGCCTCTTA
CTCCTTCTTAAAACACAAGGTGAAGAGAGCCAAGAAGTGGAAGAAATTCA
AGATGAGCCAATGGAAGTTCAAGATGAACCAATGACAGCTCAAGAAGATG
AAGTTGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGAAGAAGACATT
GAAGAAATTGAAGAAAATGGTGAGAAAAAAATCTTGTTCAGTTTAAAATG
TCATCCTCTTTTCTTCAGAAATAATGTATAACACAAAGAATGAAATCTGT
TGTATTTTCTACGTCTATTTCATACGATTTTTAGTCGGTTTGAGTATCCA
TAACCGAAAGGGCATAATTAGCAAGTTGTCATTAAAGTTAGTCAATAGCT
GTTACTTTTAACCATCTTTTCACTAATTTAGACGCTGCCAAAAAACCACC
TAAGAAGGCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATGCTG
GAGAATGCAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTCAAG
AAAGTTTGCGTCCACAAAGTCAACTACAAATGTAAGAAATTGCGAATCCA
AAAATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCCGAT
TCTATTTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072392-exon-scaffold_77-1575043694:15260..15738 | TCONS_00072392-exon-scaffold_77-1575043694:15260..15738 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1575043694:14920..15069 | TCONS_00072392-exon-scaffold_77-1575043694:14920..15069 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1575043694:14478..14707 | TCONS_00072392-exon-scaffold_77-1575043694:14478..14707 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1510915933:15260..15738 | TCONS_00072392-exon-scaffold_77-1510915933:15260..15738 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1510915933:14920..15069 | TCONS_00072392-exon-scaffold_77-1510915933:14920..15069 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1510915933:14478..14707 | TCONS_00072392-exon-scaffold_77-1510915933:14478..14707 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1491911889:15260..15738 | TCONS_00072392-exon-scaffold_77-1491911889:15260..15738 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1491911889:14920..15069 | TCONS_00072392-exon-scaffold_77-1491911889:14920..15069 | Clytia hemisphaerica | exon |
| TCONS_00072392-exon-scaffold_77-1491911889:14478..14707 | TCONS_00072392-exon-scaffold_77-1491911889:14478..14707 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:14478..15738 - |
Blast
The following BLAST results are available for this feature:
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