TCONS_00072388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072388
Unique NameTCONS_00072388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1191

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072388 ID=TCONS_00072388|Name=TCONS_00072388|organism=Clytia hemisphaerica|type=transcript|length=1191bp
AAAGGTTCGAAACAATTAGCATCAAATACAAATAACTATGAGGggaattg
aaaaattattggaaTATTGGAATACGAGTTCTATCGAtgaaagaaatata
attttcaaatgcATTGTTAATCTAGGAGGAAGTGCCCTGATGCcatgaaa
aagaacaaaaaactgttaaaataccAGATAATAGTTTTGAAAGGATTATA
GCACCAAATACAAGCAACTATGAAGGGAATTAGAAAATTACTGGAAAATA
TTGGAATACTACATGAATGAAAAGAATATTATAATAATACGACTGATTCC
CTAATCacaaccaaaaaagaaaaacttcctCGTCTTAAAAGGTATAAATA
GTTGGCAGAATTTCCAGAAAATCATCatctttcaaattcatcatTTGACA
AGAAGAAAACAAAGCAACATCAGAATGAAGATTTGGAAAGTTTTATTACT
TCTATCTTTCTTGGCTGCCACAGTTTACTGTGAAGAGAGCCAAGAAGTGG
AAGAAATTCAAGATGAGCCAATGGAAGTTCAAGATGAACCAATGACAGCT
CAAGAAGATGAAGTTGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGA
AGAAGACattgaagaaattgaagaaaatgACGCTGCCAAAAAACCACCTA
AGAAGGCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATGCTGGA
GAATGCAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTCAAGAA
AGTTTGCGTACACAAAGTCAACTACAAATGTAAGAAATTGCGAATCCAAA
AATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCCGATTC
TATTTCAAAACATGCACTAAGAAGCAAGGGTCGCCTACGTTATCATGCAA
AAAGGGACCATTACAACCCCGACAATGTGCAAGGAAAATCGTTGGTCATG
GATCTGTTTTGAAAGTCGTCGACACAAAACACCAAGCTGTATAATTACAA
CAATGACATCGAAAGGAGGTTTTTCCACTTTGTAAATTATTATTTCTAGG
TTTCTAGGTGCAGGGTCCAACTATTTACTATGATTATCTTTGTACAATCA
CTTATGATTTTAAATACATCGCGTGCTATCAGGGAGAAAGTTATCATTGT
GTCCTATTGTGTACCTTTTGCTTTGCTTCGATTAAGCTTAg
Run BLAST on NCBI

protein sequence of TCONS_00072388-protein

>TCONS_00072388-protein ID=TCONS_00072388-protein|Name=TCONS_00072388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MKIWKVLLLLSFLAATVYCEESQEVEEIQDEPMEVQDEPMTAQEDEVEEV
EEDEIYGEEEDIEEIEENDAAKKPPKKAVKTKVYVEKNKNAGECKQVHVK
RTKHCFVKKVCVHKVNYKCKKLRIQKFCKFTFKKECKVCSRFYFKTCTKK
QGSPTLSCKKGPLQPRQCARKIVGHGSVLKVVDTKHQAV
Run BLAST on NCBI

transcript from alignment at scaffold_77:1486..15738-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072388 ID=TCONS_00072388|Name=TCONS_00072388|organism=Clytia hemisphaerica|type=transcript|length=14253bp|location=Sequence derived from alignment at scaffold_77:1486..15738- (Clytia hemisphaerica)
AAAGGTTCGAAACAATTAGCATCAAATACAAATAACTATGAGGGGAATTG AAAAATTATTGGAATATTGGAATACGAGTTCTATCGATGAAAGAAATATA ATTTTCAAATGCATTGTTAATCTAGGAGGAAGTGCCCTGATGCCATGAAA AAGAACAAAAAACTGTTAAAATACCAGATAATAGTTTTGAAAGGATTATA GCACCAAATACAAGCAACTATGAAGGGAATTAGAAAATTACTGGAAAATA TTGGAATACTACATGAATGAAAAGAATATTATAATAATACGACTGATTCC CTAATCACAACCAAAAAAGAAAAACTTCCTCGTCTTAAAAGGTATAAATA GTTGGCAGAATTTCCAGAAAATCATCATCTTTCAAATTCATCATTTGACA AGAAGAAAACAAAGCAACATCAGAATGAAGATTTGGAAAGTTTTATTACT TCTATCTTTCTTGGCTGCCACAGTTTACTGTAAGTACTTTGAATTTGTTA CTGAAACTGATTGTATAAGAAATAATTTCTCATTACTGAAAAGCGGGCGG GTAAAAGGACGTTTTGAAATAGCGGGGAAATCAATTGAAAATGATTGATC TTGTTTTGATTATACTGAAGAGCATGATGATTTTAAAAATAAGCCTCTTA CTCCTTCTTAAAACACAAGGTGAAGAGAGCCAAGAAGTGGAAGAAATTCA AGATGAGCCAATGGAAGTTCAAGATGAACCAATGACAGCTCAAGAAGATG AAGTTGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGAAGAAGACATT GAAGAAATTGAAGAAAATGGTGAGAAAAAAATCTTGTTCAGTTTAAAATG TCATCCTCTTTTCTTCAGAAATAATGTATAACACAAAGAATGAAATCTGT TGTATTTTCTACGTCTATTTCATACGATTTTTAGTCGGTTTGAGTATCCA TAACCGAAAGGGCATAATTAGCAAGTTGTCATTAAAGTTAGTCAATAGCT GTTACTTTTAACCATCTTTTCACTAATTTAGACGCTGCCAAAAAACCACC TAAGAAGGCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATGCTG GAGAATGCAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTCAAG AAAGTTTGCGTCCACAAAGTCAACTACAAATGTAAGAAATTGCGAATCCA AAAATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCCGAT TCTATTTCAAAACNGGTACACTTATGATTTTAAATACATCGCGTGCTATC AGGGAGAAAGTTATTATTGTGTCCAATTGTGTACCTTTTGCTTTGCTTCG ATTAAGCTTAGCGAATTTTAAGAAAAATAAGGAGTCTTTTGAGAGACAGA CATTCGAATCGAAAAAGTTCTTTATATCCCTTTAAGTGCCACGGTCTTTT TTTCTTAGTTCTTTTAAAGAAGATCGCTAGTTTAAACTTTAAAGGCTTAC ATCTCTAGATCTAGAAGGAGTTAGAAGCTCGTTCATAGCTCGTTGGATAG CTTAGAGTCGTTGCGTGGACCTGACTAAGTAGCGGTCTGGCTTAATTTTC TCAGCGGTGCAAACTATAAAATTGGGTCCCCCGGTGTTTTTGTCCTTTTT GGCGCCCTCCATCATCAAGTGAAAATATTCAACTGGTTGAAAGTAAGGCC CGGAATCTTTGAGTTAAGAAACATCTTTTATTTATACGAAAATGGTGGTA ATGGTAACTTGATATCTTTTGCCTTGTCATTTAAAAGTCAAAGATTTCTG GGCGAGTAGGCGCAACCATGGCTTGCGCCGACATTTCACCTTTGAATCTG TCTAAAATCATCTAAATGTAAATGAATCCCCTCAAATTGGACTCAAATCG GATTAATCAAATTGAAATCGAAATTTTGTTACTAGTAAGGTGGTTTGATG AATATTTTTGTTTTAGAAAAATTTCTCAGAAAAATTACATGATAAGCTAT GCGCCGCTGGTCTTCATTCACGCTCTATTAAAACTCAATGGTAGGGACCG CAATGATTTTTTCAAATTGTTTTTAGCGCATTGAAACCATGCTCATTGGA AAGAGCATCAAAAAAGAAAAAAAATGAGGGGTCATTCATCAAAATCGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNAAGAATGCTTCTAAAACTTATCCCATGGTTATAGGTGGTCT AAAACCTAAAAACAACATTTTGGTCGATTCCAACCATTTTACCCCCGTCT TTCGCGGTCCCTATCAATGGTTAATAGAACTCCCAAAAAAATTCAAAAGT TGACTAGAATAAGGGGCACAAAAATAAAAAACCGCTTGTTTTAAATTTTG GCCCTGAAAGCAAAATTTTCATGGTATAATAACTTAAAAGAACCCCTAAA AAGAGAAAGTTAGTCAGCATAAGATACAAAAACTAGAGTGAGTAGCAACA AGTTTCGATCTTTTTGGGGAAGGACAAGCACCTTCTTGAACCCCTGGTAG ATGAACAACACTCCTCTTGCTTTTGCTTTTCGCAATTTAATAATGATGGT CGTTTCCGGCTGATGAGAAAATAAAGAGCAAATCATGCAAGAGCGCAAAT CAAAACGAAGCGCCGTAGGCGAAAAAAATCAACATTGTATTTTCTAAAGG GCGCTAAACGATCGTTAGATAATGAAAGGGCACTAAATCGCTCAATTAAA CATCGACGGAATTTTGACGCCCACTTGAATAGCTCTTTTGGCGCCCCTCT CAGTTCTGTCTGGGGTGTGCAGTGCACACCCTGCACCCCCTGTCAGGCCG CCACTGACCTGACCGAATGATGGAAAGGTGACCAGTGGTAAAGCTTCAAA TCAGTTCGCTAAAGGACAGAATAAAGTAAAACAGGGCCAAATTTGGAGGT TCTTGGATCACTCGTTGACTAAAAATAGTCTAAAAACGGTCAAAATCTCA AAAAAGTGTACTTTTGTCAAATTTTTGCATTTTTTGGCTTTTTGGCTTAA AATCTCGCTGGAAAGACTCACTTTTGCATCTCTTTTTGCTTGACCATGAG GCACAATCCAATTTCTACGAGTTAGACCAAAAATGACGATTTCTAACTCA AACTGAACTCAAACTTTTGTCAAAAAATATACTTGACATGGGCACAGAAA GGATTATATTAAATTCTATTTACAAAAAGTATGCACTAGTTCTTATTTTT CGTTTATTTCTCAACTTGTTTTTCAACTCTCATTATATGGCAGTACTTTC GATATATATCTGAAGTCTGTCTTTTTTTCTACTAGCTTTAAAAATATTTA AAAATATTTGAATCTTGCTGATTTAAAACCTGTTGAATCTGTTTTTTTTG TATCTTTCTTAAATCATAGTCATTATAAAAACTCTGGTCTGTCAATGTAT TGTTTTAGTTTATTCTGTCAAATTTTCCTTTGTTATAAATAAAAGGCAAG TTGCGATTTGCATACTNTGCACACCCTGCACCCCCTGTCAGGCCGCCACT GACCTGACCGAATGATGGAAAGGTGCCCAGTGGTAAAGCTTCAAATCAGT TCGCTAAAGGACAGAATAAAGTAAAACAGGGCCAAATTTGGAGGTTCTTG GATCACTCGTTGACTAAAAATAGTCTAAAAACGGTCAAAATCTCAAAAAA GTGTACTTTTGTCAAATTTTTGCATTTTTTGGCTTTTTGGCTTAAAATCT CGCTGGAAAGACTCACTTTTGCATCTCTTTTTGCTTGACCATGAGGCACA ATCCAATTTCTACGAGTTAGACCAAAAATGACGATTTCTAACTCAAACTG AACTCAAACTTTTGTCAAAAAATATACTTGACATGGGCACAGAAAGGATT ATATTAAATTCTATTTACAAAAAGTATGCACTAGTTCTTATTTTTCGTTT ATTTCTCAACTTGTTTTTCAACTCTCATTATATGGCAGTACTTTCGATAT ATATCTGAAGTCTGTCTTTTTTTCTACTAGCTTTAAAAATATTTAAAAAT ATTTGAATCTTGCTGATTTAAAACCTGTTGATTCTGTTTTTTTGTATCTG ACTTAAATCATAGTCATTATAAAAACTCTGGTCTGTCAATGTATTGTTTT AGTTTATTCTGTCAAATTTTCCTTTGTTATAAATAAAAGGCAAGTTGCGA TTTGCATACTTTTTGATCACGTTACCAAATTCTCCCCTTAGGATTGGTCT AATTTCTAATCACATGATAAAAAAGTATGCAAAACAAGTCAATTTGCGCA CGCAAGCTCTAACCTGTTAACAAAAGAAGGAAACAAAAGCTTTCCAGAGC TGAGTTTTTCATATTGATTATTCTATACCCCCAAAGAGAAGTATTCTGGA AAGTCTTCTTGGGTTTAATGATAGTAGACATAAGTCAAGTTGAAGAAGGC TGTCAAACATTACATTTCTATCATCGGAGAAATCAGAGCAATGCATCAGA AACTGCTGTGTAGTAGAGTTATTTCGACAGTTATAAAAAGGATCAACTGT GTCTGCAAAATTTTGTTTGGATTTATGTTCCCGAAGATGACGGATGAGGC TATTCAGCTCACTGATACGAAAAGGAAAAAAAGGAAGCACGATATCGTTC GGTTCGACAAAAAGGTGGCACAAAAGGAGGTCTAATCCTTCGTCTTTCAC CAGCATCCTCATCTTTATCAACTTCCTCCCCCTCTTGGGAGGGTGGGGGG TACTAGGGTTGCGAGCTGACCACCCGACTTTTAACCATCGGACCCTTACC GGGGCTAAAAAGGAGAAAACAAAGGAAAATTTTGTGAATTTTACGACCCT TACCGGGACAAATTTGACCAATTTTGACCAAATTTTGATCTTTCTGGGGG TAATAAGTTGAAATTTTCCCATTTCTCATACCCTTAGTTGATTTTTTCGA CCCTTAGCAGGACTTTGGAAATCCGGAAAAGGTACCCTTAAGGGCGGCAC ATACCGTACCCTCCATTTGCCTAAGTACCCCCCGGATGTGGTCTTACATG GGCTTTGTAAATAGTGAGAAGCAAGACCCTGGGGAGGAATTCGCAAAGCC GGTTGATGAGACCAATACCTTGATTGGCTTGTTTAATTTTTTCATCAAGA TGACGAACAAAGGCTAAATTTTGATCAAGTATGAAACCAAGATGCTTTTG ATGATCTTGAACCTAAATGGGTAAGTTGTTTAATGTAATTACTGGAGGAT CTAGTAGGTTTACCCTCTGTAAAGTAGACTTCAACCGTCTGTTTAGAAGG ATCAGGGTTGAAGGACATCTTCTATTGATGAGCCAACTCATTTATCCTCT GCAAGTCACTGTTCAGTTCTTGAGAACAGTGAATCTGATCAAGAATTTGG CTTTTTGGTTTAAAATCTCGCTGGGAAGAATGTTCTTTGACGGTTTGTTT GGGAAAGCTTATTCCAGGTCGAATAACTGAACTTTTGGCATATACATTTT TTCAAAACTCACAAAAGGAGGAAGTGTCTGGAGGCATACTAAAAAAGATA TAAACACCAAAAAGTCTCAAAGGTTCGAAACAATTAGCATCAAATACAAA TAACTATGAGGGGAATTGAAAAATTATTGGAATATTGGAATACGAGTTCT ATCGATGAAAGAAATATAATTTTCAAATGCATTGTTAATCTAGGAGGAAG TGCCCTGATGCCATGAAAAAGAACAAAAAACTGTTAAAATACCAGATAAT AGTTTTGAAAGGATTATAGCACCAAATACAAGCAACTATGAAGGGAATTA GAAAATTACTGGAAAATATTGGAATACTACATGAATGAAAAGAATATTAT AATAATACGACTGATTCCCTAATCACAACCAAAAAAGAAAAACTTCCTCG TCTTAAAAGGTATAAATAGTTGGCAGAATTTCCAGAAAATCATCATCTTT CAAATTCATCATTTGACAAGAATAAAACAAAGCAACATCAGAATGAAGAT TTGGAAAGTTTTATTACTTCTTTCTTTCTTGGCTGTCACAGTTTACTGTA AGTACTTTGAATTTGTTACTGAAACTGATTGTATAAGAAATAATTTCTCA TTACTGAAAAGCGGGCGGGTAAAAGGACGTTTTGAAATAGCGGGGAAATC AATTGAAAATGATTGATCTTGTTTTGATTATACTGAAGAGCATGATGATT TTAAAAATAAGCCTCTTACTCCTTCTTAAAACACAAGGTGAAGAGAGCCA AGAAGTGGAAGAAATTCAAGATGAGCCAATGGAAGTTCAAGATGAACCAA TGACAGCTCAAGAAGATGAAGTTGAGGAAGATGAAATCGAAGGAATTCAA GACTATGAAGAAGAAGAAGACATTGACGAAACTGAAGAAAATGGTGAGAA AAAAATCTTGTTCACTTTAAAATTTCATCCTTTTTTCTTCAGAAATAATG TATAAATACACAAAGAATGAAATCTGTTGTACTTTCGACGTCTATTTCAT ACGATTTTTAGTCGATTTGAGTATCCATAATCGAAAGGGCGTAATTAGCA TAAAGTTGTCAGTAAAATTAGTCAATAGCTGTTACTTAACCATCTTTTCA CTAATTTAGACGCCAAAAAACCACCTAAACCTAAAAAGGCGGTCAAAACT AAAGTTTACGTGGAAAAAAACAAGAATGCTGGAGAATGCAAACATGTCCA TGTCAAACGTACCAAACACTGTTTCGTCAAGAAAGTTTGCATCCACAAAG TCAACCACAAGTGTAAGAAATTGCGAATCCAAAAATTCTGCAAATTTACT TTCAAGAAAGAATGCAAAGTCTGTTCCCGATTCTATTTCAAAACATGCAC TAAGAAGCAAGGGTCGCCTACGTTATCATGCAAAAAGGGACCATTACAAC CCCGACAATGTGCAAGGAAAATCGTTGGTCATGGATCTGTTTTGAAAGTC GTCGACACAAAACACCAAGCTGTATAATTACAACAATGACATCGAAAGGA GGTTTTTCCACTTTGTAAATTATTATTTCTAGGTTTCTAGGTGCAGGGTC CAACTATTTACTATGATTATCTTTGTACAATCACTTATGATTTTAAATAC ATCGCGTGCTATCAGGGAGAAAGTTATCATTGTGTCCTATTGTGTACCTT TTGCTTTGCTTCGATTAAGCTTAGCGAATTTTAAGAAAAATAAGAAGACC TTTTGAGAGACAGACATTCTAATCGAAAAAGTTCTTTATATCCCTTTAAG TGCCACGGTCTTTTTTTCTAAGTTTTTTAAGAAGATCGCTAGTTTAAACT TTAAAGGCTTATATCTCTGGATCTAGAAGGAGTTAGAAGCTCGTTCATAG CTCATTGGATAGCTTAGAGTCGCTGCGCGGACCTGACTGAATGATGGAAA GGTGCCCAGTGGTAAAGTTTCAAATCAGTTCACTAAAGGACAGAATAAAA CAAGTGATATGGACCTACCTGGTTATGAATTTAACACATATATAATTGAT ATCTACGTGAGCATGACGTGAGCATGACCGTTAGACAGTCATTCAGAACA CAAATAGTGACGGTCTATTAAAATTAGTTGTTTGTTTCTTATAGGAAAAC GTTCAGAAACCAAAATTTCATGCTCTTGAAATATTCTTTCATATTCAAGA CTTCGTGAGCAAAAAAAACATCTATCTCATCAAAAAATTGAGTAGTTTGG CTAAGAACATTGATGTATGCTTATTAATAGTGATTCTTATAGATAAAGAT GCGTTTTTTGAGATGAAAAATTCTTTTTTTACAGATATCTGCTTGAGCCA TCTTTTACCAATGATGGTACCCTACTTTCATGCAAAAAAGCAGAAAAAAC AATGATCCAATATTTCATTAAGTCCAAAAAACCCTTTTTTTAGCTGTTTT TTTGGCCCAAATTTGCCCAAAAACATTTTTTTTCGAAAATCGGGCACCGT CACATTCGAGGGTTTATAGTTATGAATCTTTGTGCAAAAAATCATAAAGA ATGAAAGAGCCAATCTCGAGAAAAGCTAATACCTAATGTGCTTATAAAAA ATATCGAATTTGGCCAGTTTTTCTATAAAAACACGCCAAGCAACCAAAAT TTGATGTCTAGACACACATATTCTTCAAAAGTAAGCCCTCATGAGCAAAG AAAATATCTATCTCATAAAAGAATTGAGTAATTTGACTAGGAACATTGAT GTATGCTTATCAATCCTCTCGTCTTGGCAACTCTTTAAATGATCCAAACA TAAGAAGTAAGAAATACTGGTCTATTCTGAAGCAGTTTCTGAACGAACGT AAAACCCCGAAAATTCCACCTATTCGAAATGAAAGAAAAGTCCTTGTAAG CGATGTTTCTGAGAAGGCCGATATTTTCAACTCTTTTTTCTCAAACCAAT GCTCACTTATCGATACTGGCGGTGCTTTGCCACCTGAACAATTTCTTACT AACTCTAGACTCAATAATCTTGTATTTGAAGAAGAAAAAATCGAGTCTAT TATTAATTCTTTGAATGTTAACAAGGCCCATGGGTGGGATACTATTTCTA CTCGTATGGTCAGAATCTGTGGTAAGTCTCCAGTAAAACCTTTGCTTAGT ATATTCAATCTTTCTATCAACTCTGGCATCTTCCCATCACAGTGGAAGAA AGGTAACGTGGTTCCTGTCTATAAAAAGGGAGANCTTCGCAAGCATGTGC CTAGGAGATCTCTATTAACCATTTATAAATCTTTCATTAGGCCTCATCTT GATTATGGTGATATCGTATATTATGACCGTCCAGGAAATGCTACCTTTGT ACCTAACGAACTGAGCGTTTCCGTAACACTTTTTTTCCTTACTGCATATC TCAGTGGAATGTTCTGGGAGGTAATATACAAGATCTACCTTCAATTANTT ATATATTAGGTATTTTGGTGTAGACATTTCAAAGGCATTCGATCGGGTGT GGCACGATGGCTTAATCTTTAAACTCAAATCTTATGGGGTAACTGGACCG TTGCTTTCCTTAATTCGCAGCTTTCTTGACGATAAGCATCAGAGAGTTGT GTTGAATGGGAAAACATCTGAGTGGAAGCAAATCAATGCAGGGTTACCTC AAGGCTAAATTCTTGGTCCATTGTTCTTCTTAATTTATATTAATGATCTT CCAAAAAACCTTGAGTCAAAACCCAAGATTTTTGCTGACGATACCTCTTT ATTCTCTCTTGATCAACTCTTGAGCCTTGATGTACTTAACAGAGATCTCT CCAGGATAACTGATTGGGCTCATCAATGGAAGATGTCTTTTAACNGTAAA TTTTTGAGACCCAAGCAATCTCATGTTTTTGATGTTCCTGACATTGAAGG AGTGATCTTTCTTAATCGACTTCGGGTTTCAGCCATCTCAACGAGCATAA ATTTAGACATGGATCCGCGACACTTTAGACCCTTTCTGTGGTTGCCAAAC TAACTCTGTTGAAAACACTCAGCACTTTATCCTGCACTGCTCTATATATT CCAATGCAAGACAATCTTTGTTCGACAAACTTCAGACCCTAAGCATTGTT TTTCATCCACTTAGTCCTCCTTTTTTCTGTCGGCTTTCATTATATGGGGA TGAAAGTTTGACTTCAAATCTAAATAAATCTATTCTTTGTTCTGTTGTTG AATTTCTTAACGAAACTGGAAGGTTTAGCGGTGCTTTATTTTANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNAAATGGCTTATACCGAATTGATCAGCTGTGTCCAAAGCATTTCTT TTAATTTCTGCATCGTTGATACCTTGGAAAATATATCATCATAAAAAATC AATCAAATAAGTCTTTACGTTAGCTCCTGGCCTAGTCATTGATTACCAGA ACGTAAACACGTATAAAAACGTAGCGTGGTACGTCAATAAACTTGAAATT TCCATAAATATGGGATCTTTCTGATTCAATGGTAGGGTTGGGAAATGACT CAATAGTGAGTTCTGATCACTAAATTAAAGGGTAAAAAGGAGTTTTCTTT GAAATCTTTGGAAATTTTGAGGCAGTTTGAGGCAAAGCTTTGCTAAGGAA AATAATAAAATTACTATCAAACGTAGACCACTAGCTTTACTATTGTGGAT TAGAACGGATATACCTTGCAAGAACTTGGCATAAATTTCGACTTGTAACT CAGAAGGAAGACACGCTGTGTATGCTGCTACCAAATCATGTTGTTGGTTT TCTATCAAGTTCTATGAAAGAAAATTAATGAAGTCAAAACATTTACAAAG GACTGTCTTTCGAAGTTTAGAAGAACAGGGAAGTAGTTTAGACTCATCAA TTCTGTCGATCGATATGAAACTTTAAATGGAGTCAAAAGGTGGTTAGGGT GACAGTCCATTCTTTAGGGACTCCTAAATAATTACGCATGTAAAAACTTG ACTGAAATCAGAAAACAAATCACATATTTAAAAAATTCGAGGCGTTGAAG CTTTCCTCTGAGATTATCGAAGTATTCAACAGCAAAACAAAAAAACAGTG AAAAGCTCAACGATTTTTTGCAAATTCTTTTGATTAGCTTCCATTGATAA ATGTTTTTTGACTGTTTGTTTGGGAAAGCTTATTCCAGGTCGAGTAACTG AACTTTTAGCATATACATTTTTTCAAAACTCACAAAAGGAGGAAGTGCCT GGAGGCATACTAAAAAAGATATAAACACCAAAAAGGCTCAAAGGTTCGAA ACAATTAGCATCAAATACAAATAACTATGAGGGGAATTGAAAAATTATTG GAATATTGGAATACGAGTTCTATCGATGAAAGAAATATAATTTTCAAATG CATTGTTAATCTAGGAGGAAGTGCCCTGATGCCATGAAAAAGAACAAAAA ACTGTTAAAATACCAGATAATAGTTTTGAAAGGATTATAGCACCAAATAC AAGCAACTATGAAGGGAATTAGAAAATTACTGGAAAATATTGGAATACTA CATGAATGAAAAGAATATTATAATAATACGACTGATTCCCTAATCACAAC CAAAAAAGAAAAACTTCCTCGTCTTAAAAGGTATAAATAGTTGGCAGAAT TTCCAGAAAATCATCAACTTTCAAATTCATCATTTGACAAGAAGAAAACA AAGCAACATCAGAATGAAGATTTGGAAAGTTTTATTACTTCTATCTTTCT TGGCTGCCACAGTTTACTGTAAGTACTTTGAATTTGTTACTGAAACTGAT TGTATAAGAAATAATTTCTCATTACTGAAAAGCGGGCGGGTAAAAGGACG TTTTGAAATAGCCTGGGAATCAAGTCTGCGAAATCATCATGAAAGAAAAA TGATTGATCTTGTTTTGATTTTACTGAAGAGCATGATGATTTAAAAAATA ATCCTGTTACTCCTTCTTAAAACACAAGGTGAAGAGAGCCAAGAAGTGGA AGAAATTCAAGATGAGCCGATGGAAGTTCAAGATGAACCAATGACAGCTC AAGAAGATGAAGTTGAGGAAGNAGCCAAGAAGTGGAAGAAATTCAAGATG AGCCAATGGAAATTCAAGCTGAACCAATGACAGCTCTAGAAGATGAAGTT GAGGAAGATGAAATCGAAGGAATTCAAGACTATGAAGAAGAAGAAGACAT TGACGAAACTGAAGAAAATGGTGAGATAAAATATTGTTCAGTTTAAAATT TCATCCTTTTTTCTTCAGAAATAATGTATAAATACACAAAGAATGAAATC TGTTGTACTTTCGACGTCTATTTCATACGATTTTTAGTCGATTTGAGTAT CCATAACCGAAAGGGCATAATTAGCATAAAGTTGTCAGTAAAATTAGTCA ATAGCTGATATTTAACCATCTTTTCACTAATTTAGACGCTGCCAAAAAAC CACCTAAACCTAAGAAGGCGGTCAAAACCAAAGTTTACGTGGAAAAAAAC AAGAATGCTGGAGAATGCAAACAAGTTCATGTCAAACGTACCAAACACTG TTTCGTCAAGAAAGTTTGCGTACACAAAGTCAACTACAAATGTAAGAAAT TGCGAATCCAAAAATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTC TGCTCCCGATTCTATTTCAAAACATGCACTAAGAAGCAAGGGTCGCCTAC GTTATCATGCAAAAAGGGACCATTACAACCCCGACAATGTGCAAGGAAAA TCGTTGGTCATGGATCTGTTTTGAAAGTCGTCGACACAAAACACCAAGCT GTATAATTACAACAATGACATCGAAAGGAGGTTTTTCCACTTTGTAAATT ATTATTTCTAGGTTTCTAGGTGCAGGGTCCAACTATTTACTATGATTATC TTTGTACAATCACTTATGATTTTAAATACATCGCGTGCTATCAGGGAGAA AGTTATCATTGTGTCCTATTGTGTACCTTTTGCTTTGCTTCGATTAAGCT TAG

Coding sequence (CDS) from alignment at scaffold_77:1486..15738-

>TCONS_00072388 ID=TCONS_00072388|Name=TCONS_00072388|organism=Clytia hemisphaerica|type=CDS|length=2280bp|location=Sequence derived from alignment at scaffold_77:1486..15738- (Clytia hemisphaerica)
GCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATGCTGGAGAATG
CAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTCAAGAAAGTTT
GCGTACACAAAGTCAACTACAAATGTAAGAAATTGCGAATCCAAAAATTC
TGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCCGATTCTATTT
CAAAACATGCACTAAGAAGCAAGGGTCGCCTACGTTATCATGCAAAAAGG
GACCATTACAACCCCGACAATGTGCAAGGAAAATCGTTGGTCATGGATCT
GTTTTGAAAGTCGTCGACACAAAACACCAAGCTGTATAAACGCTGCCAAA
AAACCACCTAAGAAGGTGAAGAGAGCCAAGAAGTGGAAGAAATTCAAGAT
GAGCCAATGGAAGTTCAAGATGAACCAATGACAGCTCAAGAAGATGAAGT
TGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGAAGAAGACATTGAAG
AAATTGAAGAAAATGATGAAGATTTGGAAAGTTTTATTACTTCTATCTTT
CTTGGCTGCCACAGTTTACTGCGGTCAAAACCAAAGTTTACGTGGAAAAA
AACAAGAATGCTGGAGAATGCAAACAAGTTCATGTCAAACGTACCAAACA
CTGTTTCGTCAAGAAAGTTTGCGTACACAAAGTCAACTACAAATGTAAGA
AATTGCGAATCCAAAAATTCTGCAAATTTACTTTCAAGAAAGAATGCAAA
GTCTGCTCCCGATTCTATTTCAAAACATGCACTAAGAAGCAAGGGTCGCC
TACGTTATCATGCAAAAAGGGACCATTACAACCCCGACAATGTGCAAGGA
AAATCGTTGGTCATGGATCTGTTTTGAAAGTCGTCGACACAAAACACCAA
GCTGTATAAACGCTGCCAAAAAACCACCTAAGAAGGTGAAGAGAGCCAAG
AAGTGGAAGAAATTCAAGATGAGCCAATGGAAGTTCAAGATGAACCAATG
ACAGCTCAAGAAGATGAAGTTGAGGAAGTTGAGGAAGATGAAATCTATGG
AGAAGAAGAAGACATTGAAGAAATTGAAGAAAATGATGAAGATTTGGAAA
GTTTTATTACTTCTATCTTTCTTGGCTGCCACAGTTTACTGCGGTCAAAA
CCAAAGTTTACGTGGAAAAAAACAAGAATGCTGGAGAATGCAAACAAGTT
CATGTCAAACGTACCAAACACTGTTTCGTCAAGAAAGTTTGCGTACACAA
AGTCAACTACAAATGTAAGAAATTGCGAATCCAAAAATTCTGCAAATTTA
CTTTCAAGAAAGAATGCAAAGTCTGCTCCCGATTCTATTTCAAAACATGC
ACTAAGAAGCAAGGGTCGCCTACGTTATCATGCAAAAAGGGACCATTACA
ACCCCGACAATGTGCAAGGAAAATCGTTGGTCATGGATCTGTTTTGAAAG
TCGTCGACACAAAACACCAAGCTGTATAAACGCTGCCAAAAAACCACCTA
AGAAGGTGAAGAGAGCCAAGAAGTGGAAGAAATTCAAGATGAGCCAATGG
AAGTTCAAGATGAACCAATGACAGCTCAAGAAGATGAAGTTGAGGAAGTT
GAGGAAGATGAAATCTATGGAGAAGAAGAAGACATTGAAGAAATTGAAGA
AAATGATGAAGATTTGGAAAGTTTTATTACTTCTATCTTTCTTGGCTGCC
ACAGTTTACTGCGGTCAAAACCAAAGTTTACGTGGAAAAAAACAAGAATG
CTGGAGAATGCAAACAAGTTCATGTCAAACGTACCAAACACTGTTTCGTC
AAGAAAGTTTGCGTACACAAAGTCAACTACAAATGTAAGAAATTGCGAAT
CCAAAAATTCTGCAAATTTACTTTCAAGAAAGAATGCAAAGTCTGCTCCC
GATTCTATTTCAAAACATGCACTAAGAAGCAAGGGTCGCCTACGTTATCA
TGCAAAAAGGGACCATTACAACCCCGACAATGTGCAAGGAAAATCGTTGG
TCATGGATCTGTTTTGAAAGTCGTCGACACAAAACACCAAGCTGTATAAA
CGCTGCCAAAAAACCACCTAAGAAGGTGAAGAGAGCCAAGAAGTGGAAGA
AATTCAAGATGAGCCAATGGAAGTTCAAGATGAACCAATGACAGCTCAAG
AAGATGAAGTTGAGGAAGTTGAGGAAGATGAAATCTATGGAGAAGAAGAA
GACATTGAAGAAATTGAAGAAAATGATGAAGATTTGGAAAGTTTTATTAC
TTCTATCTTTCTTGGCTGCCACAGTTTACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044949XLOC_044949Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072388-exon-scaffold_77-1575043694:15260..15738TCONS_00072388-exon-scaffold_77-1575043694:15260..15738Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1575043694:14920..15069TCONS_00072388-exon-scaffold_77-1575043694:14920..15069Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1575043694:14682..14707TCONS_00072388-exon-scaffold_77-1575043694:14682..14707Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1575043694:1486..2021TCONS_00072388-exon-scaffold_77-1575043694:1486..2021Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1510915933:15260..15738TCONS_00072388-exon-scaffold_77-1510915933:15260..15738Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1510915933:14920..15069TCONS_00072388-exon-scaffold_77-1510915933:14920..15069Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1510915933:14682..14707TCONS_00072388-exon-scaffold_77-1510915933:14682..14707Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1510915933:1486..2021TCONS_00072388-exon-scaffold_77-1510915933:1486..2021Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1491911889:15260..15738TCONS_00072388-exon-scaffold_77-1491911889:15260..15738Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1491911889:14920..15069TCONS_00072388-exon-scaffold_77-1491911889:14920..15069Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1491911889:14682..14707TCONS_00072388-exon-scaffold_77-1491911889:14682..14707Clytia hemisphaericaexon
TCONS_00072388-exon-scaffold_77-1491911889:1486..2021TCONS_00072388-exon-scaffold_77-1491911889:1486..2021Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072388-proteinTCONS_00072388-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:1486..15738 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.106823 0.107626 0.521185 0.342211 0 0 358.833 513.025 28.8884 6.50436 4.04311 151.152 0 0.21647 0 0 0 0 1.38366e-06 1.2216 0.103295 0 0 0 0 0.10165 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top