|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072358 ID=TCONS_00072358|Name=TCONS_00072358|organism=Clytia hemisphaerica|type=transcript|length=2116bp
CAAAAAGGTGTATGGCACTACAGGCTAGATGTAACATGATAGAAAACTCC
CCAATTTCACTTTATTTGAGTGAATAATGAGCTAATTTAACTCTGATTAA
AGTcttatttttcttcaatatttagAAATTAGATATAAAAAAGATAATGG
CAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGCAATT
CGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGTGGAA
TGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTGGATCAAGCTT
TCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGTCGGC
CATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAGATAC
ATCATCTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATTATTC
TCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATTGATG
AGTGATATTTTTGATGCATTAACATTGACTGaatgtgaaaaacttttcaa
ttttgtcGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTCAAAC
TTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAGACTT
TCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCTTAGC
TTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGTCAGT
TTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATTCAAT
ATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTGCAAG
TCCTATTGATTTCAATCTATATTATCGATTTTGGTTCCTTCAGGATTTCT
TCAGGCAGCCTAACCAATGCTTTAAACCAGAGGGATGGAAAAAGTTCAAG
AACTATGTTACTGAAattcTGAATGTGTTTGAGAACTACAAGATCGAATA
CAACGAAAAGAAACGCAGCAAAGGAGGGTCCAATGCAGTTGACGACGTTA
CATTTGCTGACATTATGAGCACAAGCGGGAACGCAGATTATTTCCCTAAA
TATCTTACCAACGAAAAGTTGTTGGACCTTCAAATCAATGATAGTAATTT
TCGTCGATATTTCCTTGTCCAAATCTTGATTTTGTGTCAGTATTTGACAG
GCGAGGTTAAGTTTAAAACACAAGCCAATTATAAACTGCTTGAGAAACAA
TCACTCTGGGTTCACGAGTTGGTTGATCGTGTTTATGGCATTATAAACGA
TACACCtccaaaaggaaagaaatttgcAAACGTCGTCCGACACGTGTTAA
CTCGTGAGGAGAACTGGATTTCTTGGAAGAACGAAGGCTGCCAATCCTTT
GCCAAAGCTGAACAGAAGCTGACTGCACCAAAGCCTCAGGTCCGAGAGGT
GATGAGAGGGAAACGAATGGTCAAGACACGAGGTGCGAAGAGAAGTGTAG
GAGATGAATTCTTAAAtaacacaaagaaaaagatcaatCTTGGTACACCT
GAACTCACCAAATTATGGAACCTCTGTCCagATAACATGGAGGCATGCAA
AGCAGAGAGTAGATTGAAATTCCTTCCACAGCTGGAACCTTTCTTCGAGG
AAGCAGTTGAACAAGCAGATCCAGAAGCCGGTATAGAGGACGAATACAAG
ATCGTGAATAAACCAAACTTCCAATGGAAAGCACTTCGTCTGTTAGCACG
CAGAAGTCATCATTTCTTCACACCTTCCACGACTCCTTTCAAAGCACTCC
CCGCATACTTAACCAGTGTCATTGAGCAGTTAGGCAAAGAATTCAATAAA
ACTGCACAGAATGCTGTTTCTTTGAACGAGACAGCTGAAACCACCGTAAA
ACAGGAATTGACTGTATAAATAcccaaaaaacaagaaagaatcTCCTTTT
CTTTGtatggtttaatttgggattgtGAGAGTCTATGCGTACATCTTACT
TTTGTAAAGTTTAATTAgatcattttttaactttttactaaaaatcatta
aaatccaATCATTTTCTTGTGAAATCTTTTGGCATTCAGCTTGTTTTATA
ACTGTAGagattgaac Run BLAST on NCBI protein sequence of TCONS_00072358-protein >TCONS_00072358-protein ID=TCONS_00072358-protein|Name=TCONS_00072358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
MASGINFVETVEKFLSAIRSIANDDCDKVIEETWNDCTGGDADKKSALDQ
AFRQFIAGKITDSCVVVGHQNEDGTDMEIVKNGDTSSEKITLFQNSLNMI
ILHAQQNKCTSYLPITLMSDIFDALTLTECEKLFNFVEDNVKIWTAEPFF
KLGKNHLLRMCNDILRRLSKSLNTIFCGRIQLFLACLFPVEEKSALNIMS
QFHTENLTVYKKNKEEFNMEALLDDNDTDIPEVASPIDFNLYYRFWFLQD
FFRQPNQCFKPEGWKKFKNYVTEILNVFENYKIEYNEKKRSKGGSNAVDD
VTFADIMSTSGNADYFPKYLTNEKLLDLQINDSNFRRYFLVQILILCQYL
TGEVKFKTQANYKLLEKQSLWVHELVDRVYGIINDTPPKGKKFANVVRHV
LTREENWISWKNEGCQSFAKAEQKLTAPKPQVREVMRGKRMVKTRGAKRS
VGDEFLNNTKKKINLGTPELTKLWNLCPDNMEACKAESRLKFLPQLEPFF
EEAVEQADPEAGIEDEYKIVNKPNFQWKALRLLARRSHHFFTPSTTPFKA
LPAYLTSVIEQLGKEFNKTAQNAVSLNETAETTVKQELTV Run BLAST on NCBI transcript from alignment at scaffold_77:185569..188277+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072358 ID=TCONS_00072358|Name=TCONS_00072358|organism=Clytia hemisphaerica|type=transcript|length=2709bp|location=Sequence derived from alignment at scaffold_77:185569..188277+ (Clytia hemisphaerica)
CAAAAAGGTGTATGGCACTACAGGCTAGATGTAACATGATAGAAAACTCC
CCAATTTCACTTTATTTGAGTGAATAATGAGCTAATTTAACTCTGATTAA
AGTcttatttttcttcaatatttagAAATTAGATATAAAAAAGATAATGG
CAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGCAATT
CGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGTGGAA
TGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTGGATCAAGCTT
TCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGTCGGC
CATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAGATAC
ATCATCTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATTATTC
TCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATTGATG
AGTGATATTTTTGATGCATTAACATTGACTGaatgtgaaaaacttttcaa
ttttgtcGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTCAAAC
TTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAGACTT
TCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCTTAGC
TTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGTCAGT
TTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATTCAAT
ATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTGCAAG
TCCTNAGAATTCAACATGGAGGCTCTCCTTGATGATAACGATACTGACAT
CCCAGAGGTTGCAAGTCCTATTGATTTCAATCTATATTATCGATTTTGGT
TCCTTCAGGATTTCTTCAGGCAGCCTAACCAATGCTTTAAACCAGAGGGA
TGGAAAAAGTTCAAGAACTATGTTACTGAAGTAAGTATGGTCTAGATTAC
CTGGTCTAGAAACAGTTATAGGATTTTTAATCCTTTATGTATCTTGGAGG
CACaaagccaaagaaaatttttattggaGATCAAAGCAGTGCGCcaacct
gggcagattctcttGAGTGAATGCGTGTCATGCGTggagtatcagaatct
gctcggagattatAAGTGCTTGAAAGCTTATCTGCTTTGAGTGCTTTTAA
ATGGCAGCTTAACCAAATTCCTGCAGCTCAAAGTATTGTAGGCTAATttc
ttgttgtctttttaaCGTCTTCAGCTGTTAtcatactttttgaattttag
attcTGAATGTGTTTGAGAACTACAAGATCGAATACAACGAAAAGAAACG
CAGCAAAGGAGGGTCCAATGCAGTTGACGACGTTACATTTGCTGACATTA
TGAGCACAAGCGGGAACGCAGATTATTTCCCTAAATATCTTACCAACGAA
AAGTTGTTGGACCTTCAAATCAATGATAGTAATTTTCGTCGATATTTCCT
TGTCCAAATCTTGATTTTGTGTCAGTATTTGACAGGCGAGGTTAAGTTTA
AAACACAAGCCAATTATAAACTGCTTGAGAAACAATCACTCTGGGTTCAC
GAGTTGGTTGATCGTGTTTATGGCATTATAAACGATACACCtccaaaagg
aaagaaatttgcAAACGTCGTCCGACACGTGTTAACTCGTGAGGAGAACT
GGATTTCTTGGAAGAACGAAGGCTGCCAATCCTTTGCCAAAGCTGAACAG
AAGCTGACTGCACCAAAGCCTCAGGTCCGAGAGGTGATGAGAGGGAAACG
AATGGTCAAGACACGAGGTGCGAAGAGAAGTGTAGGAGATGAATTCTTAA
AtaacacaaagaaaaagatcaatCTTGGTACACCTGAACTCACCAAATTA
TGGAACCTCTGTCCaggtaagtttgaaattttttaaagcgGTTAAAAACT
TTTAGCTTGACCACTATATCTTTAAGTAAGATTTTTCTGTTAAAACCTGG
TGGTCATGGCTAAGTTTTGAGATTACTGTCTATATCCAATGAGGCTTCAC
TCCAAATTAATATCAAGCCTGATGGACAGCTTCCATTTCGAATACTTATT
CATCTTTTGTTTCTCATTTGTCAGATAACATGGAGGCATGCAAAGCAGAG
AGTAGATTGAAATTCCTTCCACAGCTGGAACCTTTCTTCGAGGAAGCAGT
TGAACAAGCAGATCCAGAAGCCGGTATAGAGGACGAATACAAGATCGTGA
ATAAACCAAACTTCCAATGGAAAGCACTTCGTCTGTTAGCACGCAGAAGT
CATCATTTCTTCACACCTTCCACGACTCCTTTCAAAGCACTCCCCGCATA
CTTAACCAGTGTCATTGAGCAGTTAGGCAAAGAATTCAATAAAACTGCAC
AGAATGCTGTTTCTTTGAACGAGACAGCTGAAACCACCGTAAAACAGGAA
TTGACTGTATAAATAcccaaaaaacaagaaagaatcTCCTTTTCTTTGta
tggtttaatttgggattgtGAGAGTCTATGCGTACATCTTACTTTTGTAA
AGTTTAATTAgatcattttttaactttttactaaaaatcattaaaatcca
ATCATTTTCTTGTGAAATCTTTTGGCATTCAGCTTGTTTTATAACTGTAG
agattgaac Coding sequence (CDS) from alignment at scaffold_77:185569..188277+ >TCONS_00072358 ID=TCONS_00072358|Name=TCONS_00072358|organism=Clytia hemisphaerica|type=CDS|length=7092bp|location=Sequence derived from alignment at scaffold_77:185569..188277+ (Clytia hemisphaerica)
ATGGCAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGC
AATTCGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGT
GGAATGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTGGATCAA
GCTTTCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGT
CGGCCATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAG
ATACATCATCTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATT
ATTCTCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATT
GATGAGTGATATTTTTGATGCATTAACATTGACTGaatgtgaaaaacttt
tcaattttgtcGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTC
AAACTTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAG
ACTTTCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCT
TAGCTTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGT
CAGTTTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATT
CAATATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTG
CAAGTCCTATTGATTTCAATCTATATTATCGATTTTGGTTCCTTCAGGAT
TTCTTCAGGCAGCCTAACCAATGCTTTAAACCAGAGGGATGGAAAAAGTT
CAAGAACTATGTTACTGAAattcTGAATGTGTTTGAGAACTACAAGATCG
AATACAACGAAAAGAAACGCAGCAAAGGAGGGTCCAATGCAGTTGACGAC
GTTACATTTGCTGACATTATGAGCACAAGCGGGAACGCAGATTATTTCCC
TAAATATCTTACCAACGAAAAGTTGTTGGACCTTCAAATCAATGATAGTA
ATTTTCGTCGATATTTCCTTGTCCAAATCTTGATTTTGTGTCAGTATTTG
ACAGGCGAGGTTAAGTTTAAAACACAAGCCAATTATAAACTGCTTGAGAA
ACAATCACTCTGGGTTCACGAGTTGGTTGATCGTGTTTATGGCATTATAA
ACGATACACCtccaaaaggaaagaaatttgcAAACGTCGTCCGACACGTG
TTAACTCGTGAGGAGAACTGGATTTCTTGGAAGAACGAAGGCTGCCAATC
CTTTGCCAAAGCTGAACAGAAGCTGACTGCACCAAAGCCTCAGGTCCGAG
AGGTGATGAGAGGGAAACGAATGGTCAAGACACGAGGTGCGAAGAGAAGT
GTAGGAGATGAATTCTTAAAtaacacaaagaaaaagatcaatCTTGGTAC
ACCTGAACTCACCAAATTATGGAACCTCTGTCCagATAACATGGAGGCAT
GCAAAGCAGAGAGTAGATTGAAATTCCTTCCACAGCTGGAACCTTTCTTC
GAGGAAGCAGTTGAACAAGCAGATCCAGAAGCCGGTATAGAGGACGAATA
CAAGATCGTGAATAAACCAAACTTCCAATGGAAAGCACTTCGTCTGTTAG
CACGCAGAAGTCATCATTTCTTCACACCTTCCACGACTCCTTTCAAAGCA
CTCCCCGCATACTTAACCAGTGTCATTGAGCAGTTAGGCAAAGAATTCAA
TAAAACTGCACAGAATGCTGTTTCTTTGAACGAGACAGCTGAAACCACCG
TAAAACAGGAATTGACTGTATAAATGGCAAGTGGAATAAATTTTGTGGAG
ACGGTTGAAAAATTTCTGTCAGCAATTCGTTCGATAGCTAACGATGATTG
TGATAAGGTCATAGAGGAAACGTGGAATGATTGCACTGGTGGTGATGCAG
ATAAAAAATCAGCGTTGGATCAAGCTTTCCGACAATTCATTGCTGGTAAG
ATAACAGATAGTTGTGTTGTTGTCGGCCATCAAAACGAAGATGGCACAGA
CATGGAAATTGTCAAGAATGGAGATACATCATCTGAGAAAATCACATTGT
TCCAAAATTCATTGAATATGATTATTCTCCACGCTCAACAAAACAAGTGC
ACATCCTACCTTCCAATCACATTGATGAGTGATATTTTTGATGCATTAAC
ATTGACTGaatgtgaaaaacttttcaattttgtcGAGGACAATGTTAAGA
TATGGACAGCTGAACCTTTTTTCAAACTTGGTAAAAATCACCTATTGCGC
ATGTGCAATGATATCCTTCGAAGACTTTCAAAATCTCTGAACACTATCTT
TTGTGGTCGCATTCAACTGTTCTTAGCTTGTTTATTCCCAGTGGAAGAGA
AATCAGCATTGAACATTATGAGTCAGTTTCACACAGAAAACTTGACTGTT
TACAAGAAAAACAAAGAGGAATTCAATATGGAGGCTCTCCTTGATGATAA
CGATACTGACATCCCAGAGGTTGCAAGTCCTATTGATTTCAATCTATATT
ATCGATTTTGGTTCCTTCAGGATTTCTTCAGGCAGCCTAACCAATGCTTT
AAACCAGAGGGATGGAAAAAGTTCAAGAACTATGTTACTGAAattcTGAA
TGTGTTTGAGAACTACAAGATCGAATACAACGAAAAGAAACGCAGCAAAG
GAGGGTCCAATGCAGTTGACGACGTTACATTTGCTGACATTATGAGCACA
AGCGGGAACGCAGATTATTTCCCTAAATATCTTACCAACGAAAAGTTGTT
GGACCTTCAAATCAATGATAGTAATTTTCGTCGATATTTCCTTGTCCAAA
TCTTGATTTTGTGTCAGTATTTGACAGGCGAGGTTAAGTTTAAAACACAA
GCCAATTATAAACTGCTTGAGAAACAATCACTCTGGGTTCACGAGTTGGT
TGATCGTGTTTATGGCATTATAAACGATACACCtccaaaaggaaagaaat
ttgcAAACGTCGTCCGACACGTGTTAACTCGTGAGGAGAACTGGATTTCT
TGGAAGAACGAAGGCTGCCAATCCTTTGCCAAAGCTGAACAGAAGCTGAC
TGCACCAAAGCCTCAGGTCCGAGAGGTGATGAGAGGGAAACGAATGGTCA
AGACACGAGGTGCGAAGAGAAGTGTAGGAGATGAATTCTTAAAtaacaca
aagaaaaagatcaatCTTGGTACACCTGAACTCACCAAATTATGGAACCT
CTGTCCagATAACATGGAGGCATGCAAAGCAGAGAGTAGATTGAAATTCC
TTCCACAGCTGGAACCTTTCTTCGAGGAAGCAGTTGAACAAGCAGATCCA
GAAGCCGGTATAGAGGACGAATACAAGATCGTGAATAAACCAAACTTCCA
ATGGAAAGCACTTCGTCTGTTAGCACGCAGAAGTCATCATTTCTTCACAC
CTTCCACGACTCCTTTCAAAGCACTCCCCGCATACTTAACCAGTGTCATT
GAGCAGTTAGGCAAAGAATTCAATAAAACTGCACAGAATGCTGTTTCTTT
GAACGAGACAGCTGAAACCACCGTAAAACAGGAATTGACTGTATAAATGG
CAAGTGGAATAAATTTTGTGGAGACGGTTGAAAAATTTCTGTCAGCAATT
CGTTCGATAGCTAACGATGATTGTGATAAGGTCATAGAGGAAACGTGGAA
TGATTGCACTGGTGGTGATGCAGATAAAAAATCAGCGTTGGATCAAGCTT
TCCGACAATTCATTGCTGGTAAGATAACAGATAGTTGTGTTGTTGTCGGC
CATCAAAACGAAGATGGCACAGACATGGAAATTGTCAAGAATGGAGATAC
ATCATCTGAGAAAATCACATTGTTCCAAAATTCATTGAATATGATTATTC
TCCACGCTCAACAAAACAAGTGCACATCCTACCTTCCAATCACATTGATG
AGTGATATTTTTGATGCATTAACATTGACTGaatgtgaaaaacttttcaa
ttttgtcGAGGACAATGTTAAGATATGGACAGCTGAACCTTTTTTCAAAC
TTGGTAAAAATCACCTATTGCGCATGTGCAATGATATCCTTCGAAGACTT
TCAAAATCTCTGAACACTATCTTTTGTGGTCGCATTCAACTGTTCTTAGC
TTGTTTATTCCCAGTGGAAGAGAAATCAGCATTGAACATTATGAGTCAGT
TTCACACAGAAAACTTGACTGTTTACAAGAAAAACAAAGAGGAATTCAAT
ATGGAGGCTCTCCTTGATGATAACGATACTGACATCCCAGAGGTTGCAAG
TCCTATTGATTTCAATCTATATTATCGATTTTGGTTCCTTCAGGATTTCT
TCAGGCAGCCTAACCAATGCTTTAAACCAGAGGGATGGAAAAAGTTCAAG
AACTATGTTACTGAAattcTGAATGTGTTTGAGAACTACAAGATCGAATA
CAACGAAAAGAAACGCAGCAAAGGAGGGTCCAATGCAGTTGACGACGTTA
CATTTGCTGACATTATGAGCACAAGCGGGAACGCAGATTATTTCCCTAAA
TATCTTACCAACGAAAAGTTGTTGGACCTTCAAATCAATGATAGTAATTT
TCGTCGATATTTCCTTGTCCAAATCTTGATTTTGTGTCAGTATTTGACAG
GCGAGGTTAAGTTTAAAACACAAGCCAATTATAAACTGCTTGAGAAACAA
TCACTCTGGGTTCACGAGTTGGTTGATCGTGTTTATGGCATTATAAACGA
TACACCtccaaaaggaaagaaatttgcAAACGTCGTCCGACACGTGTTAA
CTCGTGAGGAGAACTGGATTTCTTGGAAGAACGAAGGCTGCCAATCCTTT
GCCAAAGCTGAACAGAAGCTGACTGCACCAAAGCCTCAGGTCCGAGAGGT
GATGAGAGGGAAACGAATGGTCAAGACACGAGGTGCGAAGAGAAGTGTAG
GAGATGAATTCTTAAAtaacacaaagaaaaagatcaatCTTGGTACACCT
GAACTCACCAAATTATGGAACCTCTGTCCagATAACATGGAGGCATGCAA
AGCAGAGAGTAGATTGAAATTCCTTCCACAGCTGGAACCTTTCTTCGAGG
AAGCAGTTGAACAAGCAGATCCAGAAGCCGGTATAGAGGACGAATACAAG
ATCGTGAATAAACCAAACTTCCAATGGAAAGCACTTCGTCTGTTAGCACG
CAGAAGTCATCATTTCTTCACACCTTCCACGACTCCTTTCAAAGCACTCC
CCGCATACTTAACCAGTGTCATTGAGCAGTTAGGCAAAGAATTCAATAAA
ACTGCACAGAATGCTGTTTCTTTGAACGAGACAGCTGAAACCACCGTAAA
ACAGGAATTGACTGTATAAATGGCAAGTGGAATAAATTTTGTGGAGACGG
TTGAAAAATTTCTGTCAGCAATTCGTTCGATAGCTAACGATGATTGTGAT
AAGGTCATAGAGGAAACGTGGAATGATTGCACTGGTGGTGATGCAGATAA
AAAATCAGCGTTGGATCAAGCTTTCCGACAATTCATTGCTGGTAAGATAA
CAGATAGTTGTGTTGTTGTCGGCCATCAAAACGAAGATGGCACAGACATG
GAAATTGTCAAGAATGGAGATACATCATCTGAGAAAATCACATTGTTCCA
AAATTCATTGAATATGATTATTCTCCACGCTCAACAAAACAAGTGCACAT
CCTACCTTCCAATCACATTGATGAGTGATATTTTTGATGCATTAACATTG
ACTGaatgtgaaaaacttttcaattttgtcGAGGACAATGTTAAGATATG
GACAGCTGAACCTTTTTTCAAACTTGGTAAAAATCACCTATTGCGCATGT
GCAATGATATCCTTCGAAGACTTTCAAAATCTCTGAACACTATCTTTTGT
GGTCGCATTCAACTGTTCTTAGCTTGTTTATTCCCAGTGGAAGAGAAATC
AGCATTGAACATTATGAGTCAGTTTCACACAGAAAACTTGACTGTTTACA
AGAAAAACAAAGAGGAATTCAATATGGAGGCTCTCCTTGATGATAACGAT
ACTGACATCCCAGAGGTTGCAAGTCCTATTGATTTCAATCTATATTATCG
ATTTTGGTTCCTTCAGGATTTCTTCAGGCAGCCTAACCAATGCTTTAAAC
CAGAGGGATGGAAAAAGTTCAAGAACTATGTTACTGAAattcTGAATGTG
TTTGAGAACTACAAGATCGAATACAACGAAAAGAAACGCAGCAAAGGAGG
GTCCAATGCAGTTGACGACGTTACATTTGCTGACATTATGAGCACAAGCG
GGAACGCAGATTATTTCCCTAAATATCTTACCAACGAAAAGTTGTTGGAC
CTTCAAATCAATGATAGTAATTTTCGTCGATATTTCCTTGTCCAAATCTT
GATTTTGTGTCAGTATTTGACAGGCGAGGTTAAGTTTAAAACACAAGCCA
ATTATAAACTGCTTGAGAAACAATCACTCTGGGTTCACGAGTTGGTTGAT
CGTGTTTATGGCATTATAAACGATACACCtccaaaaggaaagaaatttgc
AAACGTCGTCCGACACGTGTTAACTCGTGAGGAGAACTGGATTTCTTGGA
AGAACGAAGGCTGCCAATCCTTTGCCAAAGCTGAACAGAAGCTGACTGCA
CCAAAGCCTCAGGTCCGAGAGGTGATGAGAGGGAAACGAATGGTCAAGAC
ACGAGGTGCGAAGAGAAGTGTAGGAGATGAATTCTTAAAtaacacaaaga
aaaagatcaatCTTGGTACACCTGAACTCACCAAATTATGGAACCTCTGT
CCagATAACATGGAGGCATGCAAAGCAGAGAGTAGATTGAAATTCCTTCC
ACAGCTGGAACCTTTCTTCGAGGAAGCAGTTGAACAAGCAGATCCAGAAG
CCGGTATAGAGGACGAATACAAGATCGTGAATAAACCAAACTTCCAATGG
AAAGCACTTCGTCTGTTAGCACGCAGAAGTCATCATTTCTTCACACCTTC
CACGACTCCTTTCAAAGCACTCCCCGCATACTTAACCAGTGTCATTGAGC
AGTTAGGCAAAGAATTCAATAAAACTGCACAGAATGCTGTTTCTTTGAAC
GAGACAGCTGAAACCACCGTAAAACAGGAATTGACTGTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072358-exon-scaffold_77-1491911889:185569..186368 | TCONS_00072358-exon-scaffold_77-1491911889:185569..186368 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1510915933:185569..186368 | TCONS_00072358-exon-scaffold_77-1510915933:185569..186368 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1575043694:185569..186368 | TCONS_00072358-exon-scaffold_77-1575043694:185569..186368 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1491911889:186434..186598 | TCONS_00072358-exon-scaffold_77-1491911889:186434..186598 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1510915933:186434..186598 | TCONS_00072358-exon-scaffold_77-1510915933:186434..186598 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1575043694:186434..186598 | TCONS_00072358-exon-scaffold_77-1575043694:186434..186598 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1491911889:186919..187534 | TCONS_00072358-exon-scaffold_77-1491911889:186919..187534 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1510915933:186919..187534 | TCONS_00072358-exon-scaffold_77-1510915933:186919..187534 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1575043694:186919..187534 | TCONS_00072358-exon-scaffold_77-1575043694:186919..187534 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1491911889:187743..188277 | TCONS_00072358-exon-scaffold_77-1491911889:187743..188277 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1510915933:187743..188277 | TCONS_00072358-exon-scaffold_77-1510915933:187743..188277 | Clytia hemisphaerica | exon |
| TCONS_00072358-exon-scaffold_77-1575043694:187743..188277 | TCONS_00072358-exon-scaffold_77-1575043694:187743..188277 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:185569..188277 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR021861 | THO_THOC1 |
Blast
BLAST of TCONS_00072358 vs. Swiss-Prot (Human)
Match: THOC1 (THO complex subunit 1 OS=Homo sapiens GN=THOC1 PE=1 SV=1) HSP 1 Score: 468.003 bits (1203), Expect = 7.000e-155 Identity = 251/573 (43.80%), Postives = 346/573 (60.38%), Query Frame = 3
Query: 171 ETVEKFLSAIRSIANDDCDKVIEETWNDCTGGDADKKSALDQAFRQFIAGKITDSCVVVGHQNEDGTDMEIVKNGDTSSEKITLFQNSLNMIILHAQQNKCTSYLPITLMSDIFDALTLTECEKLFNFVEDNVKIWTAEPFFKLGKNHLLRMCNDILRRLSKSLNTIFCGRIQLFLACLFPVEEKSALNIMSQFHTENLTVYKKNKEEFNM--------EALLD-----DNDTDIPEVAS-PIDFNLYYRFWFLQDFFRQPNQCFKPEGWKKFKNYVTEILNVFENYKIEYNEKKRSKGGSNAVDDVTFADIMSTSGNADYFPKYLTNEKLLDLQINDSNFRRYFLVQILILCQYLTGEVKFKTQANYKLLEKQSLWVHELVDRVYGIINDTPPKGKKFANVVRHVLTREENWISWKNEGCQSFAKAEQKLTAPKPQVREVMRGKRMVKTRGAKRSVGDEFLN-NTKKKINLGTPELTKLWNLCPDNMEACKAESRLKFLPQLEPFFEEAVEQADPEAGIEDEYKIVNKPNFQWKALRLLARRSHHFFTPSTTPFKALPAYLTSVIEQLGKEF 1844
E +F + R N+ K + T++ G + +KK LDQAFR + +I + H +S E + +++ I + CT+ P L+ D+ D L L +C+ +F FVE NV W + F+ GKN+LLRMCND+LRRLSKS NT+FCGRIQLFLA LFP+ EKS LN+ SQF+ EN+TV+ N++E + E +D D + P S PID+NLY +FW LQD+FR P QC++ WK F Y E+L VF++YK++ + R K + + T G YF K+LT+EKL+DLQ++DSNFRR+ L+Q LIL QYL G+VKFK+ +NY L ++QSLW+ + VY ++++ PP G++F+ +V H+L EENW SWKNEGC SF K T P +R KR+ ++FL KKI +G ELT+LWNLCPDNMEACK+E+R + +P LE FFEEA+EQADPE +E+EYK VN N+ W+ALRLLARRS HFF P+ FK+LP YL +++ +L KE
Sbjct: 12 EARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILEEEI------INH---------------SSCENVLAI---ISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKK-----------MEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKS-SNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIR--------------KRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETR-EHMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL 533
The following BLAST results are available for this feature:
|
