|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072341 ID=TCONS_00072341|Name=TCONS_00072341|organism=Clytia hemisphaerica|type=transcript|length=994bp
CTACTTGGCCTGTTAGAAAGGCGGGGTGTACAGAAAAACCTGGCACATGC
GCCTTAGATGAAACGAATAGTATTCGGCACCAAATAACGAAAAGAAATGT
CGGTATTATTGAATTAACCGTTTAGAATCTTGACCGCTAATTGTATAATC
GAATCCAAGTAAAcgtatgttgttgtttttttgtccaATGAAAATTGACT
CAACTATTTATTATTGCTGTCCACAATTTGtgattgatttaattttatgt
TCCGGTAATGGCTTTATAATGGTTTTGCTTGGTATTTTTATGATAACCAC
GTGCAAAGGTCGGCatatttttcatgctctttgcaaaaaaacaaacataa
ttTTTAGAATTGAAATGCCCCTGGTGTCATTATTAATGCTAAGCACTGAA
GGCAGGGTGCCTATCACCAAACATGTGTATAGTTTTGCATTTAATTCATC
TTTTATCAATctaactttcaaaaataattaaaatgatAATCGTGAGAGCT
TATTGGTTGACTTGGATTAATTACATCATAAATGATGAGATTTAGCAAAT
CAGTTTGATTGGGATATTGAGCAGagttttttaaagttaaagaaatgtat
acgttttattataagaacaaactatataagaacataaggcttccatggcc
aaaatctgaaaaacaacttaagaacattttaaggctttgtggactctaaa
gcacccgactttttaagaaaatggacaaaagatTTCACATTAAGGTAAAa
taaagaacatgttaagaatatttttaggattaaaactcagttaagaacat
ccgaaggcttcaaaaattttggatgttcttataaaaaaggtgtattttgt
GACGAGTTCTCCCGAGCTGTTTCTGTATCAAACATTACCCCATTAATACA
TAAAAATATGTTTACATACAAGTCAAATCTATCGAATCAAATCTTCCCAA
AACAAAAGGTCATTGACCCAGTTCCTAATCAAATTTATTCTCCA Run BLAST on NCBI transcript from alignment at scaffold_76:130730..131723 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072341 ID=TCONS_00072341|Name=TCONS_00072341|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at scaffold_76:130730..131723 (Clytia hemisphaerica)
TGGAGAATAAATTTGATTAGGAACTGGGTCAATGACCTTTTGTTTTGGGA
AGATTTGATTCGATAGATTTGACTTGTATGTAAACATATTTTTATGTATT
AATGGGGTAATGTTTGATACAGAAACAGCTCGGGAGAACTCGTCacaaaa
tacaccttttttataagaacatccaaaatttttgaagccttcggatgttc
ttaactgagttttaatcctaaaaatattcttaacatgttctttatTTTAC
CTTAATGTGAAatcttttgtccattttcttaaaaagtcgggtgctttaga
gtccacaaagccttaaaatgttcttaagttgtttttcagattttggccat
ggaagccttatgttcttatatagtttgttcttataataaaacgtatacat
ttctttaactttaaaaaactCTGCTCAATATCCCAATCAAACTGATTTGC
TAAATCTCATCATTTATGATGTAATTAATCCAAGTCAACCAATAAGCTCT
CACGATTatcattttaattatttttgaaagttagATTGATAAAAGATGAA
TTAAATGCAAAACTATACACATGTTTGGTGATAGGCACCCTGCCTTCAGT
GCTTAGCATTAATAATGACACCAGGGGCATTTCAATTCTAAAaattatgt
ttgtttttttgcaaagagcatgaaaaatatGCCGACCTTTGCACGTGGTT
ATCATAAAAATACCAAGCAAAACCATTATAAAGCCATTACCGGAacataa
aattaaatcaatcaCAAATTGTGGACAGCAATAATAAATAGTTGAGTCAA
TTTTCATtggacaaaaaaacaacaacatacgTTTACTTGGATTCGATTAT
ACAATTAGCGGTCAAGATTCTAAACGGTTAATTCAATAATACCGACATTT
CTTTTCGTTATTTGGTGCCGAATACTATTCGTTTCATCTAAGGCGCATGT
GCCAGGTTTTTCTGTACACCCCGCCTTTCTAACAGGCCAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072341-exon-scaffold_76-1491911889:130730..131723 | TCONS_00072341-exon-scaffold_76-1491911889:130730..131723 | Clytia hemisphaerica | exon |
| TCONS_00072341-exon-scaffold_76-1510915933:130730..131723 | TCONS_00072341-exon-scaffold_76-1510915933:130730..131723 | Clytia hemisphaerica | exon |
| TCONS_00072341-exon-scaffold_76-1575043694:130730..131723 | TCONS_00072341-exon-scaffold_76-1575043694:130730..131723 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_76 | supercontig | scaffold_76:130730..131723 . |
Blast
The following BLAST results are available for this feature:
|
