TCONS_00072338 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072338
Unique NameTCONS_00072338
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072338 ID=TCONS_00072338|Name=TCONS_00072338|organism=Clytia hemisphaerica|type=transcript|length=142bp
CGTTGAAAATCTTGATCATGAGGCACAATGTGGTTTCCGTCAAGGTAGAG
GTTGCATGGATGCTGTATTCGCGATCAAACTTGCTCTTAAAAAACGCAGA
GAACACAATTTAGAAACATGGGTACTCTTTCTTGACCTTGTC
Run BLAST on NCBI

transcript from alignment at scaffold_76:113622..113763

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072338 ID=TCONS_00072338|Name=TCONS_00072338|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at scaffold_76:113622..113763 (Clytia hemisphaerica)
GACAAGGTCAAGAAAGAGTACCCATGTTTCTAAATTGTGTTCTCTGCGTT
TTTTAAGAGCAAGTTTGATCGCGAATACAGCATCCATGCAACCTCTACCT
TGACGGAAACCACATTGTGCCTCATGATCAAGATTTTCAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044918XLOC_044918Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072338-exon-scaffold_76-1491911889:113622..113763TCONS_00072338-exon-scaffold_76-1491911889:113622..113763Clytia hemisphaericaexon
TCONS_00072338-exon-scaffold_76-1510915933:113622..113763TCONS_00072338-exon-scaffold_76-1510915933:113622..113763Clytia hemisphaericaexon
TCONS_00072338-exon-scaffold_76-1575043694:113622..113763TCONS_00072338-exon-scaffold_76-1575043694:113622..113763Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:113622..113763 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top