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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072333 ID=TCONS_00072333|Name=TCONS_00072333|organism=Clytia hemisphaerica|type=transcript|length=1214bp
CAAAAAACTTGTTTTGCTAAAACCTATCTTTGTGCAGAACAACAAATATG
TCAATCAAAAAGAAACTGGTGACTAACTTCATCTTTCCTTTAACGTGAAA
GTTCTAAAATTTATTCATAAGTTTCTGCCACGATTTATCTCTCATAAGTA
ATCCATGAACATATCAAAGACACGTCTATCTTCTATCGTCTATTTGAAGC
GAGCTTGtctgccgcctgtatttcaaatttGGTTTAAAAAGTCCGACAGT
ATTCTGTCACAAAGTTATTTCTTTGTAGCTTGGACATTACTCGTAATTCA
CAAAATAATTAATCTCAATTTTTTCATATGTTTCCAATTCCAGCTGCGTG
TATACTTTATAATCATTTTTGTTACTCCAATTTTCTTTATGACTTGAATG
AtcttatgatatagataaaagacttgagaagagtaggaACAAAAGAGACT
TTTGTCAAAGTCTTGACGTTGTTAGCTAGATATTCCCAAGAGATAtatca
acaaatttgttttgttacatttaatgtttttaacgaggcggcaacgaagc
tagcagtgttttctttctataaaaatacaaagaagGTGAATGTCCAGACC
TTTAAATGTCCACGCAGAATCCAATAAGAAATTTCTCCAACAAAGAGCGT
CAACTATATCATTATTTCTAAAATTCTTGATAGTGATTTTCTTAGGAAGA
GATTCTTCATTTTCTGATTTCAAAAACTCTCCCTGTCAGTATCAAGCTAT
TAGTCATGTTAACTACCGGCAGATATTtgactaccgtaagttggtctaat
ctcgacatccgtcttctaatttcgacacccttttttagagataggaatag
tatgaaagttggaatcggtgattgaaaaaagatttatcctcccttaccac
taagcaaagaaaaattatttcgacctttttattatttttcagcGCTAGAA
AAGGGAGTCGaatttagacgagggatgtcgacatcAGACAAAGTTACAGT
ACCGGTAGATATTTGACGAGCACCAACAGAAAATGTTATAGTGAATTTAA
AATAAGAAACTTGATTTGTTTAAACTCACTATATTTTCCGTTCGTATTCG
TGATTATCACATAGAGAAAGtgtctattgtttcattttcaaaacaagtta
aaacgcatgcgtatTTATAAACTGTTAGTCGTTATTATACGCAATacaca
aagaggaatgaata Run BLAST on NCBI transcript from alignment at scaffold_76:55510..56723 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072333 ID=TCONS_00072333|Name=TCONS_00072333|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at scaffold_76:55510..56723 (Clytia hemisphaerica)
tattcattcctctttgtgtATTGCGTATAATAACGACTAACAGTTTATAA
atacgcatgcgttttaacttgttttgaaaatgaaacaatagacaCTTTCT
CTATGTGATAATCACGAATACGAACGGAAAATATAGTGAGTTTAAACAAA
TCAAGTTTCTTATTTTAAATTCACTATAACATTTTCTGTTGGTGCTCGTC
AAATATCTACCGGTACTGTAACTTTGTCTgatgtcgacatccctcgtcta
aattCGACTCCCTTTTCTAGCgctgaaaaataataaaaaggtcgaaataa
tttttctttgcttagtggtaagggaggataaatcttttttcaatcaccga
ttccaactttcatactattcctatctctaaaaaagggtgtcgaaattaga
agacggatgtcgagattagaccaacttacggtagtcaAATATCTGCCGGT
AGTTAACATGACTAATAGCTTGATACTGACAGGGAGAGTTTTTGAAATCA
GAAAATGAAGAATCTCTTCCTAAGAAAATCACTATCAAGAATTTTAGAAA
TAATGATATAGTTGACGCTCTTTGTTGGAGAAATTTCTTATTGGATTCTG
CGTGGACATTTAAAGGTCTGGACATTCACcttctttgtatttttatagaa
agaaaacactgctagcttcgttgccgcctcgttaaaaacattaaatgtaa
caaaacaaatttgttgataTATCTCTTGGGAATATCTAGCTAACAACGTC
AAGACTTTGACAAAAGTCTCTTTTGTtcctactcttctcaagtcttttat
ctatatcataagaTCATTCAAGTCATAAAGAAAATTGGAGTAACAAAAAT
GATTATAAAGTATACACGCAGCTGGAATTGGAAACATATGAAAAAATTGA
GATTAATTATTTTGTGAATTACGAGTAATGTCCAAGCTACAAAGAAATAA
CTTTGTGACAGAATACTGTCGGACTTTTTAAACCaaatttgaaatacagg
cggcagaCAAGCTCGCTTCAAATAGACGATAGAAGATAGACGTGTCTTTG
ATATGTTCATGGATTACTTATGAGAGATAAATCGTGGCAGAAACTTATGA
ATAAATTTTAGAACTTTCACGTTAAAGGAAAGATGAAGTTAGTCACCAGT
TTCTTTTTGATTGACATATTTGTTGTTCTGCACAAAGATAGGTTTTAGCA
AAACAAGTTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072333-exon-scaffold_76-1491911889:55510..56723 | TCONS_00072333-exon-scaffold_76-1491911889:55510..56723 | Clytia hemisphaerica | exon |
| TCONS_00072333-exon-scaffold_76-1510915933:55510..56723 | TCONS_00072333-exon-scaffold_76-1510915933:55510..56723 | Clytia hemisphaerica | exon |
| TCONS_00072333-exon-scaffold_76-1575043694:55510..56723 | TCONS_00072333-exon-scaffold_76-1575043694:55510..56723 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_76 | supercontig | scaffold_76:55510..56723 . |
Blast
The following BLAST results are available for this feature:
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