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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072331 ID=TCONS_00072331|Name=TCONS_00072331|organism=Clytia hemisphaerica|type=transcript|length=1188bp
GTTTGCCATAGTGCACGCTGGAATCGCTTTTAGTAAGTTTATTTTCACGt
tattttcttagtattttctAGATTATCTATTGCTCGTGTGCTTCTTTCAT
CCTGTGGTGTTTGCTTGTTTCTCGCTTCTTTTCGTCTTCGTCAGCCTGGT
CCTGTAGCTTTCTGTGATTTGGGTCATGTTTTTCTGAGAGTCTCTTGTAT
TATGGTCTTGCGCTACAGGACCCTTAGttcaatattttaatatttttcat
ttttataatttttctccttttgtATCTTATTTTAGCTAAAAGTCGAAATA
CCAGTAAAGGCAAACTTTAAGACGTGTGCACATTCTCCAACAGTAAAAGC
GAAAGTGCTACCATGTCCTCCAATTCGCCCTTGCAAAAGGTGTTACGCGA
TAAAAGAAGTGCCGAACGTTCCTTTAACAAACAGTACGAAATCGTAATCG
AGGGGCTTGCTGATGATGACGAATCCTACTTAGATGGTGAATTGAAGCTG
CTCAACACCGATTTCGAAAATCTAAAGATTACCCACGGCAAAGTCCAGTC
ATTTAGTGAAGGAGACGAATATGACGCAAATGAACTTTGGTTCGACATTA
TCGAGGACAAAATGACTGTTCTAAAAGGAGACATTCGTCTCTGGAAACGC
AATCTCAAGGACCTGAAGGAACCGGTAGCCGGTAAAGAACGTTCGGTCAT
CCCAGAAGTATGTTCAGTTCTTCAGCCCAAAAATTCGTCATTCCTAAACG
ACATTGCAACTGACAACATATCTAATGAGGAAGAAACAACTTCGAGTAAA
AACCATCAAGCTGCTCGACAACAAAATTCAAACGAAACCCTAGATCAATC
ATCCACCATTTTGGTCCCAAAGAATCACAATAGTGCTATCAACGAGACTT
TATGTAGATTATTGGAGCAACAGGGAGCGCCAGACGTAACGATTGACAAA
TTTGACGGCAATCCTCTTGAATACAAGTACTTCATCGCCACGTTTATGGA
GGCTGTTGATAGCAAGGTCTGCACTGATAGAGGACGACTACTTCGACTCA
ATCAACATCTTGAAGGAGAGCCAAAGGAGCTTGTTCGACACTGCATCCAA
GAACCGCCATCTCTCGGCTATTGCCACGCATTACAACTCCTCAAGGACCA
GTACGGTGATCCCTACAGAGTTTTTGTTGCATACAGAC Run BLAST on NCBI protein sequence of TCONS_00072331-protein >TCONS_00072331-protein ID=TCONS_00072331-protein|Name=TCONS_00072331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
MSSNSPLQKVLRDKRSAERSFNKQYEIVIEGLADDDESYLDGELKLLNTD
FENLKITHGKVQSFSEGDEYDANELWFDIIEDKMTVLKGDIRLWKRNLKD
LKEPVAGKERSVIPEVCSVLQPKNSSFLNDIATDNISNEEETTSSKNHQA
ARQQNSNETLDQSSTILVPKNHNSAINETLCRLLEQQGAPDVTIDKFDGN
PLEYKYFIATFMEAVDSKVCTDRGRLLRLNQHLEGEPKELVRHCIQEPPS
LGYCHALQLLKDQYGDPYRVFVAYR Run BLAST on NCBI transcript from alignment at scaffold_76:31114..32301 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072331 ID=TCONS_00072331|Name=TCONS_00072331|organism=Clytia hemisphaerica|type=transcript|length=1188bp|location=Sequence derived from alignment at scaffold_76:31114..32301 (Clytia hemisphaerica)
GTCTGTATGCAACAAAAACTCTGTAGGGATCACCGTACTGGTCCTTGAGG
AGTTGTAATGCGTGGCAATAGCCGAGAGATGGCGGTTCTTGGATGCAGTG
TCGAACAAGCTCCTTTGGCTCTCCTTCAAGATGTTGATTGAGTCGAAGTA
GTCGTCCTCTATCAGTGCAGACCTTGCTATCAACAGCCTCCATAAACGTG
GCGATGAAGTACTTGTATTCAAGAGGATTGCCGTCAAATTTGTCAATCGT
TACGTCTGGCGCTCCCTGTTGCTCCAATAATCTACATAAAGTCTCGTTGA
TAGCACTATTGTGATTCTTTGGGACCAAAATGGTGGATGATTGATCTAGG
GTTTCGTTTGAATTTTGTTGTCGAGCAGCTTGATGGTTTTTACTCGAAGT
TGTTTCTTCCTCATTAGATATGTTGTCAGTTGCAATGTCGTTTAGGAATG
ACGAATTTTTGGGCTGAAGAACTGAACATACTTCTGGGATGACCGAACGT
TCTTTACCGGCTACCGGTTCCTTCAGGTCCTTGAGATTGCGTTTCCAGAG
ACGAATGTCTCCTTTTAGAACAGTCATTTTGTCCTCGATAATGTCGAACC
AAAGTTCATTTGCGTCATATTCGTCTCCTTCACTAAATGACTGGACTTTG
CCGTGGGTAATCTTTAGATTTTCGAAATCGGTGTTGAGCAGCTTCAATTC
ACCATCTAAGTAGGATTCGTCATCATCAGCAAGCCCCTCGATTACGATTT
CGTACTGTTTGTTAAAGGAACGTTCGGCACTTCTTTTATCGCGTAACACC
TTTTGCAAGGGCGAATTGGAGGACATGGTAGCACTTTCGCTTTTACTGTT
GGAGAATGTGCACACGTCTTAAAGTTTGCCTTTACTGGTATTTCGACTTT
TAGCTAAAATAAGATacaaaaggagaaaaattataaaaatgaaaaatatt
aaaatattgaaCTAAGGGTCCTGTAGCGCAAGACCATAATACAAGAGACT
CTCAGAAAAACATGACCCAAATCACAGAAAGCTACAGGACCAGGCTGACG
AAGACGAAAAGAAGCGAGAAACAAGCAAACACCACAGGATGAAAGAAGCA
CACGAGCAATAGATAATCTagaaaatactaagaaaataaCGTGAAAATAA
ACTTACTAAAAGCGATTCCAGCGTGCACTATGGCAAAC Coding sequence (CDS) from alignment at scaffold_76:31114..32301 >TCONS_00072331 ID=TCONS_00072331|Name=TCONS_00072331|organism=Clytia hemisphaerica|type=CDS|length=825bp|location=Sequence derived from alignment at scaffold_76:31114..32301 (Clytia hemisphaerica)
TCTGTATGCAACAAAAACTCTGTAGGGATCACCGTACTGGTCCTTGAGGA
GTTGTAATGCGTGGCAATAGCCGAGAGATGGCGGTTCTTGGATGCAGTGT
CGAACAAGCTCCTTTGGCTCTCCTTCAAGATGTTGATTGAGTCGAAGTAG
TCGTCCTCTATCAGTGCAGACCTTGCTATCAACAGCCTCCATAAACGTGG
CGATGAAGTACTTGTATTCAAGAGGATTGCCGTCAAATTTGTCAATCGTT
ACGTCTGGCGCTCCCTGTTGCTCCAATAATCTACATAAAGTCTCGTTGAT
AGCACTATTGTGATTCTTTGGGACCAAAATGGTGGATGATTGATCTAGGG
TTTCGTTTGAATTTTGTTGTCGAGCAGCTTGATGGTTTTTACTCGAAGTT
GTTTCTTCCTCATTAGATATGTTGTCAGTTGCAATGTCGTTTAGGAATGA
CGAATTTTTGGGCTGAAGAACTGAACATACTTCTGGGATGACCGAACGTT
CTTTACCGGCTACCGGTTCCTTCAGGTCCTTGAGATTGCGTTTCCAGAGA
CGAATGTCTCCTTTTAGAACAGTCATTTTGTCCTCGATAATGTCGAACCA
AAGTTCATTTGCGTCATATTCGTCTCCTTCACTAAATGACTGGACTTTGC
CGTGGGTAATCTTTAGATTTTCGAAATCGGTGTTGAGCAGCTTCAATTCA
CCATCTAAGTAGGATTCGTCATCATCAGCAAGCCCCTCGATTACGATTTC
GTACTGTTTGTTAAAGGAACGTTCGGCACTTCTTTTATCGCGTAACACCT
TTTGCAAGGGCGAATTGGAGGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072331-exon-scaffold_76-1491911889:31114..32301 | TCONS_00072331-exon-scaffold_76-1491911889:31114..32301 | Clytia hemisphaerica | exon |
| TCONS_00072331-exon-scaffold_76-1510915933:31114..32301 | TCONS_00072331-exon-scaffold_76-1510915933:31114..32301 | Clytia hemisphaerica | exon |
| TCONS_00072331-exon-scaffold_76-1575043694:31114..32301 | TCONS_00072331-exon-scaffold_76-1575043694:31114..32301 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_76 | supercontig | scaffold_76:31114..32301 . |
Blast
The following BLAST results are available for this feature:
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