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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072322 ID=TCONS_00072322|Name=TCONS_00072322|organism=Clytia hemisphaerica|type=transcript|length=535bp
aacaatggctctattgttttgagaacaatagaatgcttagcataatgcga
gcctgataaagggacagacacttgcttataaaaaacatttacagtAACCG
TTCAGTACCTTATTCCATCGCCAGAAAGGTCTTCACATACAACAGTCCAT
TTGGAATATTGATCACATTTAGGGTCGTTGGTACCAATAAATTGATACTT
TGTTGCAGCACAACCATGTGACCCACATCCAGAATTCGATGTAGGTCTTG
ACTTAAAAGACAAACGTGCTGGAATAAAAGCTTGTCGGAATTTGTACCAG
ATCAAGTGAGGAAAAGCGTAATCAAGGTTGCCAGTGCCTTGGGCATTTCT
TCCACTGTGCCATACTTGGTCGCTACCctaaaaaaagagttgaaaatatG
AATTTTGAGTCACAGTtataaaaattcattttctccTTTTGTTTCTTcga
gttttattttcattttcgcTTTTTAAATTATTGATATTAAAGAAAATAAT
GCCCTGATTTATCTTTTCCACACGCTATACAATTG Run BLAST on NCBI transcript from alignment at scaffold_76:104649..106132- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072322 ID=TCONS_00072322|Name=TCONS_00072322|organism=Clytia hemisphaerica|type=transcript|length=1484bp|location=Sequence derived from alignment at scaffold_76:104649..106132- (Clytia hemisphaerica)
AACAATGGCTCTATTGTTTTGAGAACAATAGAATGCTTAGCATAATGCGA
GCCTGATAAAGGGACAGACACTTGCTTATAAAAAACATTTACAGTAACCG
TTCAGTACCTTATTCCATCGCCAGAAAGGTCTTCACATACAACAGTCCAT
TTGGAATATTGATCACATTTAGGGTCGTTGGTACCANATATTTTCAAATA
AACATTGTATGAAAATATTATTACAGATTGATTCTAGTCTCTAGCCCACA
TTCGGATCCCATTGATGGAGACTTCACTTGCACCAGTATATGCGCTGTCC
AAAACACTGATTCCCAAACAACTGAATGATTCACGCATGCTTTCATCAAC
TGTACAATATTTTGGTGAACTGTTGATATTGCTGAACAATGGAAAAGGAT
AAATAAGAATTTTTAACACGAATTTGTCAAGAGAAATCAAATACAAAAAC
AATTCCAAAAGTTAAAAATATTATCATACCAAGAATATGTTCTTTGCCGC
ATTTTTTTATCCTACGTACATTGAAATTAGCTGCAATATGTATATGAAAA
CAAAAGCAAAGCGAGATATACTCTGGAAGATTTATTAAGAAGTGCAGACG
TTTATGACATATTCATTATCTTATAAAACAAAGACAATAATTACAGTGTC
GTAAAAACCGCTCTCATCCATAAATTTTGCAGGGTATCTCGCTACGCCTA
TGGAAAAATCCCAAATTATCATTACTTTATTCTTTCTTTCAGATAGCCTA
ACTGGTTGGCAATGAACCTATTAAATAAGTGAACAAACGGCCTGGAACCT
CTCAGATTATATTTGTAAGATTTTTAAAATATTTTTGATTTTCGAATCTG
ATCCTAAGGCCTTTAAGTATGGAGGCATTTCATATACATGTTTTTTATTT
TATAAGCATAACGTTTTTAAGCATATACAGGCTCAGTTTTTAGTATCTAA
ACAATGGCTCTATTGTTTTGAGAACAATAGAATGCTTAGCATAATGCGAG
CCTGATAAAGGGACAGACACTTGCTTATAAAAAACATTTACAGTAACCGT
TCAGTACCTTATTCCATCGCCAGAAAGGTTTTCACATACAACAGTCCATT
TGGAATATTGATCACATTTAGGGTCGTTGGTACCAATAAATTGATACTTT
GTTGCAGCACAACCATGTGACCCACATCCAGAATTCGATGTAGGTCTTGA
CTTAAAAGACAAACGTGCTGGAATAAAAGCTTGTCGGAATTTGTACCAGA
TCAAGTGAGGAAAAGCGTAATCAAGGTTGCCAGTGCCTTGGGCATTTCTT
CCACTGTGCCATACTTGGTCGCTACCCTAAAAAAAGAGTTGAAAATATGA
ATTTTGAGTCACAGTTATAAAAATTCATTTTCTCCTTTTGTTTCTTCGAG
TTTTATTTTCATTTTCGCTTTTTAAATTATTGATATTAAAGAAAATAATG
CCCTGATTTATCTTTTCCACACGCTATACAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072322-exon-scaffold_76-1575043694:105967..106132 | TCONS_00072322-exon-scaffold_76-1575043694:105967..106132 | Clytia hemisphaerica | exon |
| TCONS_00072322-exon-scaffold_76-1575043694:104649..105017 | TCONS_00072322-exon-scaffold_76-1575043694:104649..105017 | Clytia hemisphaerica | exon |
| TCONS_00072322-exon-scaffold_76-1510915933:105967..106132 | TCONS_00072322-exon-scaffold_76-1510915933:105967..106132 | Clytia hemisphaerica | exon |
| TCONS_00072322-exon-scaffold_76-1510915933:104649..105017 | TCONS_00072322-exon-scaffold_76-1510915933:104649..105017 | Clytia hemisphaerica | exon |
| TCONS_00072322-exon-scaffold_76-1491911889:105967..106132 | TCONS_00072322-exon-scaffold_76-1491911889:105967..106132 | Clytia hemisphaerica | exon |
| TCONS_00072322-exon-scaffold_76-1491911889:104649..105017 | TCONS_00072322-exon-scaffold_76-1491911889:104649..105017 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_76 | supercontig | scaffold_76:104649..106132 - |
Blast
The following BLAST results are available for this feature:
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