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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072298 ID=TCONS_00072298|Name=TCONS_00072298|organism=Clytia hemisphaerica|type=transcript|length=1135bp
ttcttaggTATTTAATGATCGATAGCAAAACTGGATGTAATATCATTAAT
TGGACCATTCAATGATTTTAAGAGAAAACATAAACTCGAACATTCTTGAA
CTGAGATATCTGTTGTTGATAAATTAAACTAATAGATTGTAGTACGCATT
GTTTGTGATggaatattttttattcattggaaagatttcagtgaaataaa
attttttagaatACATATTTTATACGGACAATGAGTTTTAATTAAATTTG
tggttctttttgaaatttttgatgtttcgaATTGTGAAGTTATTGATTAT
AAaaccaaattataaaaattaaaaaaagaaaatttcataaaatttataTC
GTAGAATATTTTATAGTTTTAGCCATCATATTTTGTTTagattttgttta
catttttcatagATTAGctatcatttttgattttagttTATTTTGCCAAC
CTGAGATCATGCTCTCAAAATCATGTTTTTTTGTTGCCTTGACAACTTGG
TGCAATAAGTGTATTTGAGGCCTGAAGGCATTCAGCTTCTCACTTCTCAC
GACTCATGGCAGACATGGAATAAGGACCTCAGCCGGAGTCGCTCAAGTCA
ACTCAAATTATAAACTCAAATATCATTTAACAACTGAAGACAAGTCAACA
AGTCTTAGTTGTTTTTTTGTCCCATCACACTTACCTGAATGGCCACACCA
ACACGTTTCCACTCATTGCCTAACTAGTAAGCCAGCAAtcttgtttttgc
ttttttcttttctcactCACATTTAGGTTAAGGTTAAGTTAGATATAGCT
ggatattttattttatgtatTATATTATATACTCATAGCTCTTATATTCA
CATTTTCATACAGTATTGTATTCGTGGTCTACTTGACCTCAGGCACTGAC
TTCTGGCCATTTTTAAGTCATTTGGATTTTGTCGTTTTTGCTCATTTTCG
ACTTAGTCTCTCACAAATATTCAATTATCAATTACTCATGTACGAACTAG
ATATTTATTAGCATTCATTCATTGTATTTATTTAGTTTGACAGTATTGAA
ATATCAACTCACAATTTCAATCGTTTGTACGTGACCATATGCGGTAAACC
CCACACGAAGTAGGCACTTTCTCCCCCTCTCAAAG Run BLAST on NCBI transcript from alignment at scaffold_75:392..1526 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072298 ID=TCONS_00072298|Name=TCONS_00072298|organism=Clytia hemisphaerica|type=transcript|length=1135bp|location=Sequence derived from alignment at scaffold_75:392..1526 (Clytia hemisphaerica)
CTTTGAGAGGGGGAGAAAGTGCCTACTTCGTGTGGGGTTTACCGCATATG
GTCACGTACAAACGATTGAAATTGTGAGTTGATATTTCAATACTGTCAAA
CTAAATAAATACAATGAATGAATGCTAATAAATATCTAGTTCGTACATGA
GTAATTGATAATTGAATATTTGTGAGAGACTAAGTCGAAAATGAGCAAAA
ACGACAAAATCCAAATGACTTAAAAATGGCCAGAAGTCAGTGCCTGAGGT
CAAGTAGACCACGAATACAATACTGTATGAAAATGTGAATATAAGAGCTA
TGAGTATATAATATAatacataaaataaaatatccAGCTATATCTAACTT
AACCTTAACCTAAATGTGagtgagaaaagaaaaaagcaaaaacaagaTTG
CTGGCTTACTAGTTAGGCAATGAGTGGAAACGTGTTGGTGTGGCCATTCA
GGTAAGTGTGATGGGACAAAAAAACAACTAAGACTTGTTGACTTGTCTTC
AGTTGTTAAATGATATTTGAGTTTATAATTTGAGTTGACTTGAGCGACTC
CGGCTGAGGTCCTTATTCCATGTCTGCCATGAGTCGTGAGAAGTGAGAAG
CTGAATGCCTTCAGGCCTCAAATACACTTATTGCACCAAGTTGTCAAGGC
AACAAAAAAACATGATTTTGAGAGCATGATCTCAGGTTGGCAAAATAaac
taaaatcaaaaatgatagCTAATctatgaaaaatgtaaacaaaatctAAA
CAAAATATGATGGCTAAAACTATAAAATATTCTACGAtataaattttatg
aaattttctttttttaatttttataatttggttTTATAATCAATAACTTC
ACAATtcgaaacatcaaaaatttcaaaaagaaccaCAAATTTAATTAAAA
CTCATTGTCCGTATAAAATATGTattctaaaaaattttatttcactgaaa
tctttccaatgaataaaaaatattccATCACAAACAATGCGTACTACAAT
CTATTAGTTTAATTTATCAACAACAGATATCTCAGTTCAAGAATGTTCGA
GTTTATGTTTTCTCTTAAAATCATTGAATGGTCCAATTAATGATATTACA
TCCAGTTTTGCTATCGATCATTAAATAcctaagaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072298-exon-scaffold_75-1491911889:392..1526 | TCONS_00072298-exon-scaffold_75-1491911889:392..1526 | Clytia hemisphaerica | exon |
| TCONS_00072298-exon-scaffold_75-1510915933:392..1526 | TCONS_00072298-exon-scaffold_75-1510915933:392..1526 | Clytia hemisphaerica | exon |
| TCONS_00072298-exon-scaffold_75-1575043694:392..1526 | TCONS_00072298-exon-scaffold_75-1575043694:392..1526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_75 | supercontig | scaffold_75:392..1526 . |
Blast
The following BLAST results are available for this feature:
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