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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072288 ID=TCONS_00072288|Name=TCONS_00072288|organism=Clytia hemisphaerica|type=transcript|length=812bp
CATTTCTATCTAATATTTACACAGTATTGACGTGCTGTTAAGGCATAAAC
CTTAGTTTTAATCCATTTTTGGTCAATCAAACACTCTCACCTTTTTCAGT
GTGCAGCCATTTTGTTTGCTTTTGTTTGGTCTGCATTTTATTTCACTTTT
CCCACCATTTTNttttgtttgtttttgtttggtcTGCATTTTATTTCACT
TTTCCCACCATTTTGGTTATTCTGCATTTTTCTGTGTTTGATAAGCATTT
GGTCAGTATTTTATTCATTCAATTTATGTCAATTTGATATGCATTTCCTT
TTGTTATAATTTATTCCAATTTTTCTCATAatttattttggtctgtaaat
tagACTTTTTGATCTGCCTATAAATGCCACATCATCACTCAGACCTCACT
TCAACAGAGACTTCAAGGAGTGAAGACCTCCTCTGACATGATgtcaactc
aaatcaaatgagatCAATCAATAGTCTCTTTAGTTACTCACATATACAAG
cacattcaattttcattttcattttcacacaGTTGGTGTTAGTCTTGACA
CACCCTGTGTTCTGCTGCCTGCTTACAGCATTCCACCTCAGGCCAGCTGG
tgagttttttgtttcttttctctgTCTCTATTTGTGGCACCTAAGTTAAG
TTAAGTTAGATTTTCTTTCACATTATATTAGTACTTCAATCATTCATTTA
TACATTTGTTGTTTTCTACTTCTACTTTTGTTCTCATAGACTTACATCCT
TTTGTACCTAAGttagattattttattttcattcattagacttagtattt
ttcaatttttat Run BLAST on NCBI transcript from alignment at scaffold_74:13231..14156+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072288 ID=TCONS_00072288|Name=TCONS_00072288|organism=Clytia hemisphaerica|type=transcript|length=926bp|location=Sequence derived from alignment at scaffold_74:13231..14156+ (Clytia hemisphaerica)
CATTTCTATCTAATATTTACACAGTATTGACGTGCTGTTAAGGCATAAAC
CTTAGTTTTAATCCATTTTTGGTCAATCAAACACTCTCACCTTTTTCAGT
GTGCAGCCATTTTGTTTGCTTTTGTTTGGTCTGCATTTTATTTCACTTTT
CCCACCATTTTNttttgtttgtttttgtttggtcTGCATTTTATTTCACT
TTTCCCACCATTTTGGTTATTCTGCATTTTTCTGTGTTTGATAAGCATTT
GGTCAGTATTTTATTCATTCAATTTATGTCAATTTGATATGCATTTCCTT
TTGTTATAATTTATTCCAATTTTTCTCATAatttattttggtctgtaaat
tagACTTTTTGATCTGCCTATAAATGCCACATCATCACTCAGACCTCACT
TCAACAGAGACTTCAAGGAGTGAAGACCTCCTCTGACATGATgtcaactc
aaatcaaatgagatCAATCAATAGTCTCTTTAGTTACTCACATATACAAG
CACattcaatcttcattttcacaCAGTTGGTGTTAGTCTTGACACACCCT
GTGTTCTGCTGCCTGCTTACAGCATTCTACCTCAGGCCAGCNTTTAGTTA
CTCACATATACAAGcacattcaattttcattttcattttcacacaGTTGG
TGTTAGTCTTGACACACCCTGTGTTCTGCTGCCTGCTTACAGCATTCCAC
CTCAGGCCAGCTGGtgagttttttgtttcttttctctgTCTCTATTTGTG
GCACCTAAGTTAAGTTAAGTTAGATTTTCTTTCACATTATATTAGTACTT
CAATCATTCATTTATACATTTGTTGTTTTCTACTTCTACTTTTGTTCTCA
TAGACTTACATCCTTTTGTACCTAAGttagattattttattttcattcat
tagacttagtatttttcaatttttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072288-exon-scaffold_74-1491911889:13231..13721 | TCONS_00072288-exon-scaffold_74-1491911889:13231..13721 | Clytia hemisphaerica | exon |
| TCONS_00072288-exon-scaffold_74-1510915933:13231..13721 | TCONS_00072288-exon-scaffold_74-1510915933:13231..13721 | Clytia hemisphaerica | exon |
| TCONS_00072288-exon-scaffold_74-1575043694:13231..13721 | TCONS_00072288-exon-scaffold_74-1575043694:13231..13721 | Clytia hemisphaerica | exon |
| TCONS_00072288-exon-scaffold_74-1491911889:13836..14156 | TCONS_00072288-exon-scaffold_74-1491911889:13836..14156 | Clytia hemisphaerica | exon |
| TCONS_00072288-exon-scaffold_74-1510915933:13836..14156 | TCONS_00072288-exon-scaffold_74-1510915933:13836..14156 | Clytia hemisphaerica | exon |
| TCONS_00072288-exon-scaffold_74-1575043694:13836..14156 | TCONS_00072288-exon-scaffold_74-1575043694:13836..14156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_74 | supercontig | scaffold_74:13231..14156 + |
Blast
The following BLAST results are available for this feature:
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