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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072241 ID=TCONS_00072241|Name=TCONS_00072241|organism=Clytia hemisphaerica|type=transcript|length=1180bp
GATGATAATCCTCAAaatgataatgatgatgatattcttcaaaatgataa
TAATGATGATATAACCAATACGACCTCTTCACCAGAGACGTCAGATagta
aagaaagattcgaaaacgATGACTGTTGTAAATCTGGCGACATTAATAAA
GAGAAACAGCTATTAAATGCAAAACCAACTGAAACTGAAGTAGCAGATGC
TACTTCGGTGAGTACTAGTTGTGATGAAAGTGATATACCTGGTAAAGGAT
CGTAGCGAGAAAGTCGCTTATGGGCTATTTGTTAAATTTTAACCGTAGTA
TAGTAACCTGAATATTGTTGGACGACCAGATGAATGTCGACGACGACATG
GAATTGCTAAGACCACAGTCCTTATAAAAAGCACTGGTCtagaagcttat
tgttttaactttttgttagccttttcctttgttattataaaaaagtaaaa
atcgatttgctcagtttttgatcacgttaccaagtactcctcttgggatt
ggtttaagatttaatcacatgatcaataagtgagcaaaacaaactaattt
ctcaacgcaagtccaagtaagaaacaatggaaagaaacaaacggcttcca
gaccggggttttttatacggactatgctATGGCGTTCAAACCATGGCACC
GCACTGCGGGATGGAGCTTTGTTCTCTAGAGGACCACAGTGCAGTTCCTA
ATTGATATGTTGAAGGCACTGTCTTTAAGAAGAATAGTGTGAACATTTTT
GCTCTGGAAAGTGGCCATGAAAACTCCGGGAATGAAAGGTTTAAATCATG
AAATTGATATTTCTGGTAATACAATAAGTgctgtatgatttttttttttt
gcaaaaaactttcGATCTTTGCTATCTTAATTGTTTGGCTTCTTTTCCCA
AATGAgcttactgtttaaattttcGTGAATAAATTTCCATCCCTGCGACT
TTGGCGAAATTTTAAGTCAATTCTCAAAAGTAaatgtaccttaagggaag
aatttttcgcgagaagaaattttcgcggaatttaatttcgcgaatcagag
tttcaaaatggcaaatttcgcggaatttaatttcgcgaatgagccgattt
taaaagtttcacggaatttaatttcgcgaatgagccgattttaaaagttt
cacggaatttaatttcgcgattgagaagaa Run BLAST on NCBI transcript from alignment at scaffold_71:702696..703875 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072241 ID=TCONS_00072241|Name=TCONS_00072241|organism=Clytia hemisphaerica|type=transcript|length=1180bp|location=Sequence derived from alignment at scaffold_71:702696..703875 (Clytia hemisphaerica)
ttcttctcaatcgcgaaattaaattccgtgaaacttttaaaatcggctca
ttcgcgaaattaaattccgtgaaacttttaaaatcggctcattcgcgaaa
ttaaattccgcgaaatttgccattttgaaactctgattcgcgaaattaaa
ttccgcgaaaatttcttctcgcgaaaaattcttcccttaaggtacattTA
CTTTTGAGAATTGACTTAAAATTTCGCCAAAGTCGCAGGGATGGAAATTT
ATTCACgaaaatttaaacagtaagcTCATTTGGGAAAAGAAGCCAAACAA
TTAAGATAGCAAAGATCgaaagttttttgcaaaaaaaaaaaatcatacag
cACTTATTGTATTACCAGAAATATCAATTTCATGATTTAAACCTTTCATT
CCCGGAGTTTTCATGGCCACTTTCCAGAGCAAAAATGTTCACACTATTCT
TCTTAAAGACAGTGCCTTCAACATATCAATTAGGAACTGCACTGTGGTCC
TCTAGAGAACAAAGCTCCATCCCGCAGTGCGGTGCCATGGTTTGAACGCC
ATagcatagtccgtataaaaaaccccggtctggaagccgtttgtttcttt
ccattgtttcttacttggacttgcgttgagaaattagtttgttttgctca
cttattgatcatgtgattaaatcttaaaccaatcccaagaggagtacttg
gtaacgtgatcaaaaactgagcaaatcgatttttacttttttataataac
aaaggaaaaggctaacaaaaagttaaaacaataagcttctaGACCAGTGC
TTTTTATAAGGACTGTGGTCTTAGCAATTCCATGTCGTCGTCGACATTCA
TCTGGTCGTCCAACAATATTCAGGTTACTATACTACGGTTAAAATTTAAC
AAATAGCCCATAAGCGACTTTCTCGCTACGATCCTTTACCAGGTATATCA
CTTTCATCACAACTAGTACTCACCGAAGTAGCATCTGCTACTTCAGTTTC
AGTTGGTTTTGCATTTAATAGCTGTTTCTCTTTATTAATGTCGCCAGATT
TACAACAGTCATcgttttcgaatctttctttactATCTGACGTCTCTGGT
GAAGAGGTCGTATTGGTTATATCATCATTAttatcattttgaagaatatc
atcatcattatcattTTGAGGATTATCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072241-exon-scaffold_71-1491911889:702696..703875 | TCONS_00072241-exon-scaffold_71-1491911889:702696..703875 | Clytia hemisphaerica | exon |
| TCONS_00072241-exon-scaffold_71-1510915933:702696..703875 | TCONS_00072241-exon-scaffold_71-1510915933:702696..703875 | Clytia hemisphaerica | exon |
| TCONS_00072241-exon-scaffold_71-1575043694:702696..703875 | TCONS_00072241-exon-scaffold_71-1575043694:702696..703875 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:702696..703875 . |
Blast
The following BLAST results are available for this feature:
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