TCONS_00072210 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072210
Unique NameTCONS_00072210
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length976

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072210 ID=TCONS_00072210|Name=TCONS_00072210|organism=Clytia hemisphaerica|type=transcript|length=976bp
AGAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCT
GAGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGA
GTCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAA
GGTCCTGAAGCTCAATTTTTGTTTATGAATGTTAACGGTTTTGCATTGAA
TTTTGATTACTCGCTATACAAATGGTTATCGTTTGCTCCTACTAACATTC
CACCAACATCGAAGACTTCATTCGTGGTGCGCAGGAAAACAACAAGTTCG
CTTTCTTCGACAACTCCGAGAAGAGCCAAATCATATGCTAGAGTTCGGAC
AGGCTCGACAACTTCTCCTTCGCACCATTCTAAAGATtcgaaagattttc
aaaaagaaatccaaCCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAA
ATGTTGGTGGAAAAGATAAATACTTGGAAATGCTTCCAAATCAAGGTATC
AATCGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAATAAAGGTT
GCTCTCTAAACAATGGTGTCATATCGCTAGTGCGTTCATCCATCAATGCT
CAAAATCCAATACAAAACTCTGTTCTCATCTTATGTACTCCTTGTATCAC
ATTGTCAAGCTCCCAGTTGGATCAACGTCTCTACGAAGAGCCTTTCCCAT
GTACGTCTAATACCGCGACAGCAGATACACTGCCCTGGACAATTACACTG
GACAATTTCAGCATGTTTACTTTCCTACCGAaccagaaaaaaggaaatta
cATTTGCAAACCACTGTCATGTAAAGTTTTCCTTGCTGCGTCATCTAATG
AAAAATCAACGGGTAGGAATACAGCTGTTTTCATGAACAGTGACAAACAA
CTTACAAGCTCGTTGGCACATGAAGGCAAAGTGTTGAATATTGGTTTTGT
GATTCATGCAGATTGCACCAGTTGTG
Run BLAST on NCBI

protein sequence of TCONS_00072210-protein

>TCONS_00072210-protein ID=TCONS_00072210-protein|Name=TCONS_00072210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
RGDATPIFHIPTDTHKLSDIREWHFPNGSNTEQSPDQYAVQIKMQYQKEK
GPEAQFLFMNVNGFALNFDYSLYKWLSFAPTNIPPTSKTSFVVRRKTTSS
LSSTTPRRAKSYARVRTGSTTSPSHHSKDSKDFQKEIQPTSSNKESSFEK
MLVEKINTWKCFQIKVSIESGVLVFPEKAWNKGCSLNNGVISLVRSSINA
QNPIQNSVLILCTPCITLSSSQLDQRLYEEPFPCTSNTATADTLPWTITL
DNFSMFTFLPNQKKGNYICKPLSCKVFLAASSNEKSTGRNTAVFMNSDKQ
LTSSLAHEGKVLNIGFVIHADCTSC
Run BLAST on NCBI

transcript from alignment at scaffold_71:1110526..1116585-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072210 ID=TCONS_00072210|Name=TCONS_00072210|organism=Clytia hemisphaerica|type=transcript|length=6060bp|location=Sequence derived from alignment at scaffold_71:1110526..1116585- (Clytia hemisphaerica)
AGAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCT
GAGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGA
GTCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAA
GGTCTGTGTTTGCTGAATTGTACTGTGCCGTAAGTTTAAACAAAGCGCCC
ATCGGTGTTAAAGCTATGTCATATTTAAGTCTTTTATTGTCGACTCAAAT
AAAATCTGCAATCTGGTTGGTTCAAAGGAGTAAAATTAAAATAATATATA
AATTGAGGAAAAGATACTGTTGCACGGTCACTGACACCTGAAGCTGTGGT
ATGGTTCAAAGTGTGTTTTGAGATTTTTGAAGACAAAAAAATTTTACAGG
GGAAAATTATGACATAATTAAAATAGAAAATTAGAATTTTAATTTTATTA
TTGACGCAAACTTTAGTTGGCGAGGCAGTAATTTTAACTAGTGTTGACGG
ATTTTTCTGCTAAAGTTTCCGCCAAAGCTAGTCATTGCCAAAATCAGTTC
CCCTAAGGTAATTTCTTTCTTTGTTGTTCAGGTCCTGAAGCTCAATTTTT
GTTTATGAATGTTAACGGTTTTGCATTGAATTTTGATTACTCGCTATACA
AATGGTTATCGTTTGCTCCTACTAACATTCCACCAACATCGAAGACTTCA
TTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTTCGACAACTCCGAG
AAGAGCCAAATCATATGCTAGAGGTACTTTTTCTTATTTTCTATTAGCTA
TTAGTAAAATGACAAAACGTTAGTAAAATGTAAACAATGCGCAAACGACG
TGTCGTAAAACAAAACAATTTAAAATCACTCGTCATAAAAAAGAAACAAT
TAAAAAAATCGAAATGCTTTGATTTTTTATTTTAATATTTGTTTTGATTT
CGTTTTCGTATCACACTCTATACAGGTTGTTTTAGATTTCATATCTACTT
TGATCTTGATTATTAGCATAGTGAGAAAAAATTATTAAAATATAGTCCCA
ATGCAATAAGATAGATGACAGATAAAAAAATTCACTCCATTTAAGAATTA
GTGAATAAGTTGTTCTTTCAGAAAAATGAACTAAAAATAAGGGTGTGGTG
GTTAGTAATCCTGTAACCGACCATCCAATAAAAGCAGGTTAAGCCGCTAC
ACCCAAAAGAGCAACATGAAGATCAATCTGTGAAGTTCATCAACTTGCTG
TACTGTGGTGTGTTTGCCAGTCACTTGCCTGCCTCGCACTGCAGGAGTTG
AACATTAAAACTTCCAGCCTAGTGGTGTCGCGAGCCTCGGGCTATAATGC
CAGCGAAAAAGTACAAATTTAAAGACCTTAACATCGTCACACAAAATGTT
AGAGGACTTAAATCAACGACAAAGAAACATATATTGTTCAGTCAATTCAT
CGCTCGAAATTTATTCGCAATGTGTCTACAAGAGACATGGACTAGTGATT
TCAAGAACTTGGAATACAAACAATGTATGCTATTGACCAATGGACGACCC
GTATCGGAAGTCACCAGTAAACGAGGACAAGAGGGAGTTGGAATCGTTCT
CAGTCGAGACGCCGTGTTAGCTTGGAAAGCAGCAGGTTCAGAAACCCATG
TTGATCTCGGTTCACGAATCATTGCTATACGATTGTTAGTGAAAGATGCC
AGAGGAAAGGATATCGGTATATTTCTCGTATCAGCCTATTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAGATAGAATTGGCTGGA
AAAGAATGGTGAATGGTATTGTTGTAATATGATATTATCTTGGTTGTTTT
AGTAATCTAATATTTATTATGCTACTAGTACTTTTTCTTCCTTTGGCTGG
CGCTATGATTTCCTAGGACTATTTTATTTCAATATATCTTAGATCTAGGC
CGATTCCTTTTGCATTAGGACGGATCACTCTCTCACTCTCTCCCAATGCA
ATAACTAAGTGAGAACAAAAATGTACCAAAATCTGACTCATTGCAGACTT
GGTAGCTCATTGAGCAATGAGAACTCTTTGATTTCTAAAACAATGATATA
CTTACAATTTTCCAATTTCAGTTCGGACAGGCTCGACAACTTCTCCTTCG
CACCATTCTAAAGATTCGAAAGATTTTCAAAAAGAAATCCAACCTACCTC
TTCCAACAAAGAAAGTTCTTTCGAAAAAATGTTGGTGGAAAAGATAAATA
CTTGGAAATGCTTCCAAATCAAGGTACGTCAAAGGTTTTGTTTTTAACTT
AATTTACAAACTTTTTCACATTGGATTGACTCAGATGTGGAGCAAGATTG
GTCAGAAAGAGGAAAAGAAAAACATACCTCTGGCGATATAACGTTAGTTC
CTAGCGGGGGAGGGACTATATTTTATGTTTAAGTAATGTTTTGTAATATA
TGTCCGTAGTGTACACGTGTTTTTGTTTCAATAAAGAAAAAAAAAAAAAA
AAAAAAAAAATTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAA
AAAAAAAAAACAACATTTTTTTGCTTATATCAGCATAATATAACAATAGG
CAGACACTGTCCTTATATGAAATATGTGTCTGATATGAAACGAGAACACT
TATGTAAAAAGAAAACCTTTAAAACTTATTCAACTCACAAAGGAATCGTG
TACAATTGAACCACTAATCTCTAACTAATTGACTGGATTGGACTTCCAAT
AATAACGGAGGTGATATTTAGCTTTTGAGCTGACATGATCGCCATTTTCT
TTCATTTCTGGTTGTCAACCACGGGATTCGAATGTTTTAAATTTTAAACG
CTCTAAAATTAAACGTTAAATAGAAAACAGTATGGCCTTCATAGACTACA
AAACTAGCATACAATGCTGGACAAAAGGTTGGTAGACTTCTGCAATATTT
GCAAAATACTTCAATATCGATCAAAAACAAGTTCCCAAGAGGCTTTGAAA
GTCACCCACTGCAGTCTAACCGCAAGGGCAAACCACAAGGGCTTGATTAA
CTGGCTTACACCAGTATCAAAACGCTGATTTTTTGCTTGTGGTTCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCCCCTTTCAGACACA
TAGAAGAGTCATTTTGCTCTATTTCTCATCATTTTTCACTGAAATTTCAT
TTGTCTACAACCTTTTGTCCGGCATTGTATACTTCCACTGGAAATCTGTG
AGTAGTTGGCCTATCTAGTGAATAAAAGAATAAGATATCTGTAATTCAGA
CCAAAAAGAACTTTTTATTTTTACTTACTGAATCTTATTTTATGGTTTCT
AGGTATCAATCGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAAT
AAAGGTAACAACATTTTATTTAGAACGCATCGGTTGCAATGACGAAATTT
TTATTGATATTATTTGCCTCATCCTGATTATGAAAGCCGAAACAGTAAGT
CGTAGCAGCAGTGTATCCAAAGTAGTTCAAATATCGGACGGTCAATTTGT
CGTTCATAAAAGATGAATTCAATTAAGAAGACTCAAATTATCTTACCAAA
ATCGGATCGTTTCAATTTGGGCTACTTTCAACTTTCGTTCAACTTCTCAA
TCAATTGATTATTTTTATCGTTAATTTTTAGGTTGCTCTCTAAACAATGG
TGTCATATCGCTAGTGCGTTCATCCATCAATGCTCAAAATCCAATACAAA
ACTCTGTTCTCATCTTATGTACTCCTTGTATCACATTGTCAAGCTCCCAG
TTGGATCAACGTCTCTACGAAGAGCCTTTCCCATGTACGTCTAATACCGC
GACAGCAGATACACTGCCCTGGACAATTACACTGGACAATTTCAGCATGT
TTACTTTCCTACCGAACCAGAAAAAAGGAAATTACATTTGCAAACCACTG
TCATGTAAAGTTTTCCTTGCTGCGTCATCTAATGAAAAATCAACGGGTAG
GAATACAGCTGTTTTCATGAACAGTGACAAACAACTTACAAGCTCGTTGG
CACATGAAGGCAAAGTGTTGAATATTGGTTTTGTGATTCATGCAGATTGC
ACCAGTTGTG

Coding sequence (CDS) from alignment at scaffold_71:1110526..1116585-

>TCONS_00072210 ID=TCONS_00072210|Name=TCONS_00072210|organism=Clytia hemisphaerica|type=CDS|length=4875bp|location=Sequence derived from alignment at scaffold_71:1110526..1116585- (Clytia hemisphaerica)
GTTGCTCTCTAAACAATGGTGTCATATCGCTAGTGCGTTCATCCATCAAT
GCTCAAAATCCAATACAAAACTCTGTTCTCATCTTATGTACTCCTTGTAT
CACATTGTCAAGCTCCCAGTTGGATCAACGTCTCTACGAAGAGCCTTTCC
CATGTACGTCTAATACCGCGACAGCAGATACACTGCCCTGGACAATTACA
CTGGACAATTTCAGCATGTTTACTTTCCTACCGAACCAGAAAAAAGGAAA
TTACATTTGCAAACCACTGTCATGTAAAGTTTTCCTTGCTGCGTCATCTA
ATGAAAAATCAACGGGTAGGAATACAGCTGTTTTCATGAACAGTGACAAA
CAACTTACAAGCTCGTTGGCACATGAAGGCAAAGTGTTGAATATTGGTTT
TGTGATTCATGCAGATTGCACCAGTTGTGTATCAATCGAATCTGGTGTTT
TGGTTTTTCCTGAGAAAGCGTGGAATAAAGTTCGGACAGGCTCGACAACT
TCTCCTTCGCACCATTCTAAAGATTCGAAAGATTTTCAAAAAGAAATCCA
ACCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAAATGTTGGTGGAAA
AGATAAATACTTGGAAATGCTTCCAAATCAAGGTCCTGAAGCTCAATTTT
TGTTTATGAATGTTAACGGTTTTGCATTGAATTTTGATTACTCGCTATAC
AAATGGTTATCGTTTGCTCCTACTAACATTCCACCAACATCGAAGACTTC
ATTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTTCGACAACTCCGA
GAAGAGCCAAATCATATGCTAGAGAGAGGAGATGCAACACCAATATTCCA
CATCCCTACTGACACCCACAAGCTGAGTGATATCAGAGAATGGCATTTTC
CCAATGGATCAAATACCGAACAGAGTCCCGATCAATATGCTGTCCAAATC
AAGATGCAATATCAAAAGGAAAAAGGTTGCTCTCTAAACAATGGTGTCAT
ATCGCTAGTGCGTTCATCCATCAATGCTCAAAATCCAATACAAAACTCTG
TTCTCATCTTATGTACTCCTTGTATCACATTGTCAAGCTCCCAGTTGGAT
CAACGTCTCTACGAAGAGCCTTTCCCATGTACGTCTAATACCGCGACAGC
AGATACACTGCCCTGGACAATTACACTGGACAATTTCAGCATGTTTACTT
TCCTACCGAACCAGAAAAAAGGAAATTACATTTGCAAACCACTGTCATGT
AAAGTTTTCCTTGCTGCGTCATCTAATGAAAAATCAACGGGTAGGAATAC
AGCTGTTTTCATGAACAGTGACAAACAACTTACAAGCTCGTTGGCACATG
AAGGCAAAGTGTTGAATATTGGTTTTGTGATTCATGCAGATTGCACCAGT
TGTGTATCAATCGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAA
TAAAGTTCGGACAGGCTCGACAACTTCTCCTTCGCACCATTCTAAAGATT
CGAAAGATTTTCAAAAAGAAATCCAACCTACCTCTTCCAACAAAGAAAGT
TCTTTCGAAAAAATGTTGGTGGAAAAGATAAATACTTGGAAATGCTTCCA
AATCAAGGTCCTGAAGCTCAATTTTTGTTTATGAATGTTAACGGTTTTGC
ATTGAATTTTGATTACTCGCTATACAAATGGTTATCGTTTGCTCCTACTA
ACATTCCACCAACATCGAAGACTTCATTCGTGGTGCGCAGGAAAACAACA
AGTTCGCTTTCTTCGACAACTCCGAGAAGAGCCAAATCATATGCTAGAGA
GAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCTG
AGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGAG
TCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAAG
GTTGCTCTCTAAACAATGGTGTCATATCGCTAGTGCGTTCATCCATCAAT
GCTCAAAATCCAATACAAAACTCTGTTCTCATCTTATGTACTCCTTGTAT
CACATTGTCAAGCTCCCAGTTGGATCAACGTCTCTACGAAGAGCCTTTCC
CATGTACGTCTAATACCGCGACAGCAGATACACTGCCCTGGACAATTACA
CTGGACAATTTCAGCATGTTTACTTTCCTACCGAACCAGAAAAAAGGAAA
TTACATTTGCAAACCACTGTCATGTAAAGTTTTCCTTGCTGCGTCATCTA
ATGAAAAATCAACGGGTAGGAATACAGCTGTTTTCATGAACAGTGACAAA
CAACTTACAAGCTCGTTGGCACATGAAGGCAAAGTGTTGAATATTGGTTT
TGTGATTCATGCAGATTGCACCAGTTGTGTATCAATCGAATCTGGTGTTT
TGGTTTTTCCTGAGAAAGCGTGGAATAAAGTTCGGACAGGCTCGACAACT
TCTCCTTCGCACCATTCTAAAGATTCGAAAGATTTTCAAAAAGAAATCCA
ACCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAAATGTTGGTGGAAA
AGATAAATACTTGGAAATGCTTCCAAATCAAGGTCCTGAAGCTCAATTTT
TGTTTATGAATGTTAACGGTTTTGCATTGAATTTTGATTACTCGCTATAC
AAATGGTTATCGTTTGCTCCTACTAACATTCCACCAACATCGAAGACTTC
ATTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTTCGACAACTCCGA
GAAGAGCCAAATCATATGCTAGAGAGAGGAGATGCAACACCAATATTCCA
CATCCCTACTGACACCCACAAGCTGAGTGATATCAGAGAATGGCATTTTC
CCAATGGATCAAATACCGAACAGAGTCCCGATCAATATGCTGTCCAAATC
AAGATGCAATATCAAAAGGAAAAAGGTTGCTCTCTAAACAATGGTGTCAT
ATCGCTAGTGCGTTCATCCATCAATGCTCAAAATCCAATACAAAACTCTG
TTCTCATCTTATGTACTCCTTGTATCACATTGTCAAGCTCCCAGTTGGAT
CAACGTCTCTACGAAGAGCCTTTCCCATGTACGTCTAATACCGCGACAGC
AGATACACTGCCCTGGACAATTACACTGGACAATTTCAGCATGTTTACTT
TCCTACCGAACCAGAAAAAAGGAAATTACATTTGCAAACCACTGTCATGT
AAAGTTTTCCTTGCTGCGTCATCTAATGAAAAATCAACGGGTAGGAATAC
AGCTGTTTTCATGAACAGTGACAAACAACTTACAAGCTCGTTGGCACATG
AAGGCAAAGTGTTGAATATTGGTTTTGTGATTCATGCAGATTGCACCAGT
TGTGTATCAATCGAATCTGGTGTTTTGGTTTTTCCTGAGAAAGCGTGGAA
TAAAGTTCGGACAGGCTCGACAACTTCTCCTTCGCACCATTCTAAAGATT
CGAAAGATTTTCAAAAAGAAATCCAACCTACCTCTTCCAACAAAGAAAGT
TCTTTCGAAAAAATGTTGGTGGAAAAGATAAATACTTGGAAATGCTTCCA
AATCAAGGTCCTGAAGCTCAATTTTTGTTTATGAATGTTAACGGTTTTGC
ATTGAATTTTGATTACTCGCTATACAAATGGTTATCGTTTGCTCCTACTA
ACATTCCACCAACATCGAAGACTTCATTCGTGGTGCGCAGGAAAACAACA
AGTTCGCTTTCTTCGACAACTCCGAGAAGAGCCAAATCATATGCTAGAGA
GAGGAGATGCAACACCAATATTCCACATCCCTACTGACACCCACAAGCTG
AGTGATATCAGAGAATGGCATTTTCCCAATGGATCAAATACCGAACAGAG
TCCCGATCAATATGCTGTCCAAATCAAGATGCAATATCAAAAGGAAAAAG
GTTGCTCTCTAAACAATGGTGTCATATCGCTAGTGCGTTCATCCATCAAT
GCTCAAAATCCAATACAAAACTCTGTTCTCATCTTATGTACTCCTTGTAT
CACATTGTCAAGCTCCCAGTTGGATCAACGTCTCTACGAAGAGCCTTTCC
CATGTACGTCTAATACCGCGACAGCAGATACACTGCCCTGGACAATTACA
CTGGACAATTTCAGCATGTTTACTTTCCTACCGAACCAGAAAAAAGGAAA
TTACATTTGCAAACCACTGTCATGTAAAGTTTTCCTTGCTGCGTCATCTA
ATGAAAAATCAACGGGTAGGAATACAGCTGTTTTCATGAACAGTGACAAA
CAACTTACAAGCTCGTTGGCACATGAAGGCAAAGTGTTGAATATTGGTTT
TGTGATTCATGCAGATTGCACCAGTTGTGTATCAATCGAATCTGGTGTTT
TGGTTTTTCCTGAGAAAGCGTGGAATAAAGTTCGGACAGGCTCGACAACT
TCTCCTTCGCACCATTCTAAAGATTCGAAAGATTTTCAAAAAGAAATCCA
ACCTACCTCTTCCAACAAAGAAAGTTCTTTCGAAAAAATGTTGGTGGAAA
AGATAAATACTTGGAAATGCTTCCAAATCAAGGTCCTGAAGCTCAATTTT
TGTTTATGAATGTTAACGGTTTTGCATTGAATTTTGATTACTCGCTATAC
AAATGGTTATCGTTTGCTCCTACTAACATTCCACCAACATCGAAGACTTC
ATTCGTGGTGCGCAGGAAAACAACAAGTTCGCTTTCTTCGACAACTCCGA
GAAGAGCCAAATCATATGCTAGAGAGAGGAGATGCAACACCAATATTCCA
CATCCCTACTGACACCCACAAGCTGAGTGATATCAGAGAATGGCATTTTC
CCAATGGATCAAATACCGAACAGAGTCCCGATCAATATGCTGTCCAAATC
AAGATGCAATATCAAAAGGAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044834XLOC_044834Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072210-proteinTCONS_00072210-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072210-exon-scaffold_71-1575043694:1116435..1116585TCONS_00072210-exon-scaffold_71-1575043694:1116435..1116585Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1575043694:1115813..1116004TCONS_00072210-exon-scaffold_71-1575043694:1115813..1116004Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1575043694:1112513..1112664TCONS_00072210-exon-scaffold_71-1575043694:1112513..1112664Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1575043694:1111232..1111283TCONS_00072210-exon-scaffold_71-1575043694:1111232..1111283Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1575043694:1110526..1110954TCONS_00072210-exon-scaffold_71-1575043694:1110526..1110954Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1510915933:1116435..1116585TCONS_00072210-exon-scaffold_71-1510915933:1116435..1116585Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1510915933:1115813..1116004TCONS_00072210-exon-scaffold_71-1510915933:1115813..1116004Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1510915933:1112513..1112664TCONS_00072210-exon-scaffold_71-1510915933:1112513..1112664Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1510915933:1111232..1111283TCONS_00072210-exon-scaffold_71-1510915933:1111232..1111283Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1510915933:1110526..1110954TCONS_00072210-exon-scaffold_71-1510915933:1110526..1110954Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1491911889:1116435..1116585TCONS_00072210-exon-scaffold_71-1491911889:1116435..1116585Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1491911889:1115813..1116004TCONS_00072210-exon-scaffold_71-1491911889:1115813..1116004Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1491911889:1112513..1112664TCONS_00072210-exon-scaffold_71-1491911889:1112513..1112664Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1491911889:1111232..1111283TCONS_00072210-exon-scaffold_71-1491911889:1111232..1111283Clytia hemisphaericaexon
TCONS_00072210-exon-scaffold_71-1491911889:1110526..1110954TCONS_00072210-exon-scaffold_71-1491911889:1110526..1110954Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:1110526..1116585 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.601318	0.270637	0.366608	0.204953	2.49511	2.07025	1.78405	2.728	1.01344	1.25531	0.796666	0.64692	0.646021	0.575056	0.472774	0.817412	0.763919	0.676221	0.196681	0.926157	0.939165	0.850742	0.212141	0.867902	2.03615	2.57069	0	0.676889	1.02679	0.679991
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072210 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top