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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072159 ID=TCONS_00072159|Name=TCONS_00072159|organism=Clytia hemisphaerica|type=transcript|length=577bp
CTTAAAGGTGAGAAATTTTTAAATagcatttaaaagtttttattacATTG
ATGAGACTAATGATCATaagcgaaaaaaaataaaatcatattACCGTGGC
ATATCTGAACAATCTAGTTCTTGTTTAGCCGCCGCGGCTTAAAATGGCTG
CCACGTGTTTTGGGGAAGTTTGGTAATAAATGTAAGCGGTCGCGTGTTTT
TATGGTTTAAATATAATCGGCCGCGTGTTTTATGGTCTAAATATAGGCGG
CCGCTTGATTTGCCAATCTGAAGATAAGCGGCCGCACGtattatatatat
tattttaccaTATAAACTATAACTAGTAAATGGGACCTAAGTCAAACTTT
AATCATAAAAGATTGTTAGGTAGAAATcacttttcatattcaaatttata
aatCTGTCGATAGTCAAATTGTTATCTGACAACACCTGCTCTAGGAGAGA
GGGAGTTGTTCTTCCGATTCTATGATATTTATCGGAATTAAACATTATTT
GTTTAATACCACGATCTACAGACATTCGAACGACATGTCCTGCCTAATTC
TTTTGCTGTTTTCGAATGAAACTACTG Run BLAST on NCBI transcript from alignment at scaffold_71:356654..357936- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072159 ID=TCONS_00072159|Name=TCONS_00072159|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at scaffold_71:356654..357936- (Clytia hemisphaerica)
CTTAAAGGTGAGAAATTTTTAAATAGCATTTAAAAGTTTTTATTACATTG
ATGAGACTAATGATCATAAGCGAAAAAAAATAAAATCATATTACCGTGGC
ATATCTGAACAATCTAGTTCTTGTTTAGCCGCCGCGGCTTAAAATGGCTG
CCACGTGTTTTGGGGAAGTTTGGTAATAAATGTAAGCGGTCGCGTGTTTT
TATGGTTTAAATATAAGCAACCACATGTATTAAAGACCTAAATGTAGGCG
GCCACTGGATCTATACTTTGTCGACCTCGACCCTAAACCTCGAAAAAAGC
CGACCCTTGACCAAAATACAATAAAAAGCCGACCCTGGGTAAAAAACTAC
TATATCAGCTTTTATATTTTACAAGAATTCTTTTGGATGAATATTCCATA
AATTGATCATTCGAACATTTTCATTTAGCAGTCAATCTGTGATAAAAATG
CCAGTCGTCGGTCGGGGGGAGGGGCAGTGAAAGGTCGAGGTCGAGAAAGT
ATAGATTGCCGGCAGCCGCATGTATTGACGATCTGAATGTAGTCGGCCGC
GTGTTTTATGGTCTAAATATAAGCAACCGCCTGTATTAAAGACCTAAATG
TAGGCGGCCACTGGATCTATACTTTGTCGACCTCGACCCTAAACCTCGAA
AAAAGCCGACCCTCAACCCTTGGAAAAAGCCGACCCTTGACCAAAATACA
ATAAAAAGCCGACCCTGGATAAAAAACTACTATACCAGCTTTTATATTTT
ACAAGAATTCTTTTGGATGAATATTCCATAAATTGATCATTCGAACATTT
TCATTCAGCAGTCAATCTGTGATAAAAATGTCAGTCGTCGGTCGGGGGGA
GGGGCAGTGAAAGGTCGAGGTCGAGAAAGTATAGATTGCCGGCAGCCGCA
TGTATTGACGATCTGAATGTAGTCGGCCGCGTGTTTTATGGTCTAAATAT
AGGCGGCCGCTTGATTTGCCAATCTGAAGATAAGCGGCCGCACGTATTAT
ATATATTATTTTACCATATAAACTATAACTAGTAAATGGGACCTAAGTCA
AACTTTAATCATAAAAGATTGTTAGGTAGAAATCACTTTTCATATTCAAA
TTTATAAATCTGTCGATAGTCAAATTGTTATCTGACAACACCTGCTCTAG
GAGAGAGGGAGTTGTTCTTCCGATTCTATGATATTTATCGGAATTAAACA
TTATTTGTTTAATACCACGATCTACAGACATTCGAACGACATGTCCTGCC
TAATTCTTTTGCTGTTTTCGAATGAAACTACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072159-exon-scaffold_71-1575043694:357721..357936 | TCONS_00072159-exon-scaffold_71-1575043694:357721..357936 | Clytia hemisphaerica | exon |
| TCONS_00072159-exon-scaffold_71-1575043694:356654..357014 | TCONS_00072159-exon-scaffold_71-1575043694:356654..357014 | Clytia hemisphaerica | exon |
| TCONS_00072159-exon-scaffold_71-1510915933:357721..357936 | TCONS_00072159-exon-scaffold_71-1510915933:357721..357936 | Clytia hemisphaerica | exon |
| TCONS_00072159-exon-scaffold_71-1510915933:356654..357014 | TCONS_00072159-exon-scaffold_71-1510915933:356654..357014 | Clytia hemisphaerica | exon |
| TCONS_00072159-exon-scaffold_71-1491911889:357721..357936 | TCONS_00072159-exon-scaffold_71-1491911889:357721..357936 | Clytia hemisphaerica | exon |
| TCONS_00072159-exon-scaffold_71-1491911889:356654..357014 | TCONS_00072159-exon-scaffold_71-1491911889:356654..357014 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:356654..357936 - |
Blast
The following BLAST results are available for this feature:
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