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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072158 ID=TCONS_00072158|Name=TCONS_00072158|organism=Clytia hemisphaerica|type=transcript|length=1055bp
ATTAAAGACCTAAATGTAGGCGGCCACTGGATCTATACTTTGTCGACCTC
GACCCTAAACCTCGAAAAAAGCCGACCCttgaccaaaatacaataaaaag
ccgaccctgggtaaaaaaCTACTATATCagcttttatattttacaaGAAT
TCTTTTGGATGAATATTCCATAAATTGATCATTCGAACATTTTCATTTAG
CAGTCAATCTGTGATAAAAATGCCAGTCGTCGGTCGGGGGGAGGGGCAGT
GAAAGGTCGAGGTCGAGAAAGTATAGATTGCCGGCAGCCGCATGTATTGA
CGATCTGAATGTAGTCGGCCGCGTGTTTTATGGTCTAAATATAAGCAACC
GCCTGTATTAAAGACCTAAATGTAGGCGGCCACTGGATCTATACTTTGTC
GACCTCGACCCTAAACCTcgaaaaaagccgaccctcaACCCTTGGAAAAA
GCCGACCCttgaccaaaatacaataaaaagccgaccctggATAAAAAACT
ACTATACCagcttttatattttacaaGAATTCTTTTGGATGAATATTCCA
TAAATTGATCATTCGAACATTTTCATTCAGCAGTCAATCTGTGATAAAAA
TGTCAGTCGTCGGTCGGGGGGAGGGGCAGTGAAAGGTCGAGGTCGAGAAA
GTATAGATTGCCGGCAGCCGCATGTATTGACGATCTGAATGTAGTCGGCC
GCGTGTTTTATGGTCTAAATATAGGCGGCCGCTTGATTTGCCAATCTGAA
GATAAGCGGCCGCACGtattatatatattattttaccaTATAAACTATAA
CTAGTAAATGGGACCTAAGTCAAACTTTAATCATAAAAGATTGTTAGGTA
GAAATcacttttcatattcaaatttataaatCTGTCGATAGTCAAATTGT
TATCTGACAACACCTGCTCTAGGAGAGAGGGAGTTGTTCTTCCGATTCTA
TGATATTTATCGGAATTAAACATTATTTGTTTAATACCACGATCTACAGA
CATTCGAACGACATGTCCTGCCTAATTCTTTTGCTGTTTTCGAATGAAAC
TACTG Run BLAST on NCBI transcript from alignment at scaffold_71:356654..357708- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072158 ID=TCONS_00072158|Name=TCONS_00072158|organism=Clytia hemisphaerica|type=transcript|length=1055bp|location=Sequence derived from alignment at scaffold_71:356654..357708- (Clytia hemisphaerica)
ATTAAAGACCTAAATGTAGGCGGCCACTGGATCTATACTTTGTCGACCTC
GACCCTAAACCTCGAAAAAAGCCGACCCTTGACCAAAATACAATAAAAAG
CCGACCCTGGGTAAAAAACTACTATATCAGCTTTTATATTTTACAAGAAT
TCTTTTGGATGAATATTCCATAAATTGATCATTCGAACATTTTCATTTAG
CAGTCAATCTGTGATAAAAATGCCAGTCGTCGGTCGGGGGGAGGGGCAGT
GAAAGGTCGAGGTCGAGAAAGTATAGATTGCCGGCAGCCGCATGTATTGA
CGATCTGAATGTAGTCGGCCGCGTGTTTTATGGTCTAAATATAAGCAACC
GCCTGTATTAAAGACCTAAATGTAGGCGGCCACTGGATCTATACTTTGTC
GACCTCGACCCTAAACCTCGAAAAAAGCCGACCCTCAACCCTTGGAAAAA
GCCGACCCTTGACCAAAATACAATAAAAAGCCGACCCTGGATAAAAAACT
ACTATACCAGCTTTTATATTTTACAAGAATTCTTTTGGATGAATATTCCA
TAAATTGATCATTCGAACATTTTCATTCAGCAGTCAATCTGTGATAAAAA
TGTCAGTCGTCGGTCGGGGGGAGGGGCAGTGAAAGGTCGAGGTCGAGAAA
GTATAGATTGCCGGCAGCCGCATGTATTGACGATCTGAATGTAGTCGGCC
GCGTGTTTTATGGTCTAAATATAGGCGGCCGCTTGATTTGCCAATCTGAA
GATAAGCGGCCGCACGTATTATATATATTATTTTACCATATAAACTATAA
CTAGTAAATGGGACCTAAGTCAAACTTTAATCATAAAAGATTGTTAGGTA
GAAATCACTTTTCATATTCAAATTTATAAATCTGTCGATAGTCAAATTGT
TATCTGACAACACCTGCTCTAGGAGAGAGGGAGTTGTTCTTCCGATTCTA
TGATATTTATCGGAATTAAACATTATTTGTTTAATACCACGATCTACAGA
CATTCGAACGACATGTCCTGCCTAATTCTTTTGCTGTTTTCGAATGAAAC
TACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072158-exon-scaffold_71-1575043694:356654..357708 | TCONS_00072158-exon-scaffold_71-1575043694:356654..357708 | Clytia hemisphaerica | exon |
| TCONS_00072158-exon-scaffold_71-1510915933:356654..357708 | TCONS_00072158-exon-scaffold_71-1510915933:356654..357708 | Clytia hemisphaerica | exon |
| TCONS_00072158-exon-scaffold_71-1491911889:356654..357708 | TCONS_00072158-exon-scaffold_71-1491911889:356654..357708 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:356654..357708 - |
Blast
The following BLAST results are available for this feature:
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