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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072134 ID=TCONS_00072134|Name=TCONS_00072134|organism=Clytia hemisphaerica|type=transcript|length=1243bp
GTATTGAATTGTAATGGtaatcttttgtttaaaaatcgtgaaaaaataga
aatattacCTTAATTAAGCAATAAACTTTAATTagtatttttctcttatt
tacATGCATAAATATTAAATGGAActttcaaactaaaaaaaaacagagtT
AACCCTAGAAACTATGTTAATTATTATAGACGGTTTCCAAGAAAATTGAA
CATACCTATTACATAATGCACCAAACGCATGGGAAGTCGCATTGCAAAAT
TCAAACTGAATAACGTCCCGCGGGGCTGGTCATAAGCTGTCAAGGAAAAC
ATTTATTCGGATACTTAGTTTACTTGTTACCCAGAGACTTATAACTATGG
TTGAAAACTATTGTTAATTTGAATTTAACGTGAACGCTAACTTATCGGAA
CAGCAAGATGTTCTCATTAGCGGTGAttgagaatagaccttttcataaat
tacgtcacgaacatcacttgcctcgttttgaaattattgtcgTGGTGATT
AACTCCAAGCGGAATTTATTACAACTAGTTTCTATTCATAAAATCAGTCT
GAAGGGAtatgatcaccatggaaattgtttgaatacaaggcaagtgatgt
tcgtgacgcaatttatgaaaaggtcctAGTTCAAAATCATTCGGAAAGAA
TcgaaaaagatataaaaaaacaCTCAACCGCTCACAAATACTCGAAGAAC
CAAGTTGCGATATCAAATATCAAATGTTACGAACAAATAgatccaaaaaa
ataataacaaacagTAACGAACGGTTATAGAGCTCCCATATAACGTGAAG
CCCACAAGAACCGAAATTTGGTCACGACATAACATTCTACATACTAAAAG
TAGCGTCTTATAAATCATAACAAACCAATGACAAGACTCTTTTTGATGGT
CTGTTCTTTGAGATATATCTTTGTTGACTGTGTTCTTGTCACTTGTACGA
CAGAGTATCTCTCGATAAACAGAAGTCCTTGAGTTCTCTAGATTATCATA
TGCTTAAACAGTCTTAAGACACCAACACTTGAGACGAGATATTCACATAT
ATGTGTATAAGAGTTTATTTGAAACCCAATTTCACCTATCATTAGTCCTA
GAGAAGGGTCTTTGAAGCGATTGTAAAGCCGCCCGGGCGGTCATTGGTCT
GTTTGAAGGCGATAGAGGCGGCGAAGGAGTTTTCCTTTGGTTCTGCACAG
GATGACTCTTGCTACGTATGTTGGCGTTGATGTCTGTCCTGGA Run BLAST on NCBI transcript from alignment at scaffold_71:884764..886066+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072134 ID=TCONS_00072134|Name=TCONS_00072134|organism=Clytia hemisphaerica|type=transcript|length=1303bp|location=Sequence derived from alignment at scaffold_71:884764..886066+ (Clytia hemisphaerica)
GTATTGAATTGTAATGGtaatcttttgtttaaaaatcgtgaaaaaataga
aatattacCTTAATTAAGCAATAAACTTTAATTagtatttttctcttatt
tacATGCATAAATATTAAATGGAActttcaaactaaaaaaaaacagagtT
AACCCTAGAAACTATGTTAATTATTATAGACGGTTTCCAAGAAAATTGAA
CATACCTATTACATAATGCACCAAACGCATGGGAAGTCGCATTGCAAAAT
TCAAACTGAATAACGTCCCGCGGGGCTGGTCATAAGCTGTCAAGGAAAAC
ATTTATTCGGATACTTAGTTTACTTGTTACCCAGAGACTTATAACTATGG
TTGAAAACTATTGTTAATTTGAATTTAACGTGAACGCTAACTTATCGGAA
CAGCAAGATGTTCTCATTAGCGGTGAttgagaatagaccttttcataaat
tacgtcacgaacatcacttgcctcgttttgaaattattgtcgTGGTGATT
AACTCCAAGCGGAATTTATTACAACTAGTTTCTATTCATAAAATCAGTCT
GAAGGGAtatgatcaccatggaaattgtttgaatacaaggcaagtgatgt
tcgtgacgcaatttatgaaaaggtcctAGTTCAAAATCATTCGGAAAGAA
TcgaaaaagatataaaaaaacaCTCAACCGCTCACAAATACTCGAAGAAC
CAAGTTGCGATATCAAATATCAAATGTTACGAACAAATAgatccaaaaaa
ataataacaaacagTAACGAACGGTTATAGAGCTCCCATATAACGTGAAG
CCCACAAGAACCGAAATTTGGTCACGACATAACATTCTACATACTAAAAG
TAGCGTCTTATAAATCATAACAAACCAATGACAAGACTCTTTTTGATGGT
CTGTTCTTTGAGATATATCTTTGTTGACTGTGTTCTTGTCACTTGTACGA
CAGAGTATCTCTCGATAAACAGAAGTCCTTGAGTTCTCTAGATTATCATA
TGCTTAAACAGTCTTAAGACACCAACACTTGAGACGAGATATTCACATAT
ATGTGTATAAGAGTTTATTTGAAACCCAATTTCACCTATCATTAGTCCTA
GAGAAGGGTCTTTGAAGCGATTGTAAAGCCGCCCGGGCGGTCATTGGTCT
GTTTGAAGGCGATAGAGGCGGNTGAAGCGATTGTAAAGCCGCCCGGGCGG
TCATTGGTCTGTTTAAAGGCGATAGAGGCGGCGAAGGAGTTTTCCTTTGG
TTCTGCACAGGATGACTCTTGCTACGTATGTTGGCGTTGATGTCTGTCCT
GGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072134-exon-scaffold_71-1491911889:884764..885921 | TCONS_00072134-exon-scaffold_71-1491911889:884764..885921 | Clytia hemisphaerica | exon |
| TCONS_00072134-exon-scaffold_71-1510915933:884764..885921 | TCONS_00072134-exon-scaffold_71-1510915933:884764..885921 | Clytia hemisphaerica | exon |
| TCONS_00072134-exon-scaffold_71-1575043694:884764..885921 | TCONS_00072134-exon-scaffold_71-1575043694:884764..885921 | Clytia hemisphaerica | exon |
| TCONS_00072134-exon-scaffold_71-1491911889:885982..886066 | TCONS_00072134-exon-scaffold_71-1491911889:885982..886066 | Clytia hemisphaerica | exon |
| TCONS_00072134-exon-scaffold_71-1510915933:885982..886066 | TCONS_00072134-exon-scaffold_71-1510915933:885982..886066 | Clytia hemisphaerica | exon |
| TCONS_00072134-exon-scaffold_71-1575043694:885982..886066 | TCONS_00072134-exon-scaffold_71-1575043694:885982..886066 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:884764..886066 + |
Blast
The following BLAST results are available for this feature:
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