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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072069 ID=TCONS_00072069|Name=TCONS_00072069|organism=Clytia hemisphaerica|type=transcript|length=880bp
tctctcggcccgaacatggcccgaagaggcccgagaattctcgggccatg
tcgagggtcgtaactgttgtaaaattgaaaatttatcattccACATTGGA
AgtattttcgaacttttcctagATAGAAATGGCTGATAAAGAAGAGAAGG
TTTATCTCGCACGTTTGGCTGAGCAAGCTGAGAGATATGAAGaAATGGTT
GAATACATGACATCCATAGCAAAGATGGATGTTGGTCTAACCCAAGAAGA
ACGCAATTTGCTGTCTGTTGCTTTCAAAAATGTGATTGGGGCTCGTCGTG
CATCTTGGAGGATAGTTTCGAGTATTGAGGAAAGCCGCAAGGATACTGAG
GAGAGTGCATTGGCAACTGATTACCGTAAAAAGATTGAGACTGAATTGCA
GCGGATTTGTAATGAGATTCTCGATTTGTTAGAGAAACATTTGATTCCAA
GTTCGACAGTGGAAGGAGATAGTACCTCAGCAGCATCAAATACAGAGCAA
AAAGAAGCTCATGTCTTCTATTATAAAATGCAAGGTGATTACTTACGATA
CAAAGCCGAATTCACAGCAGGGAATGACAAGAAAGAAGCGGCCGAAGCAT
CTCTACTTGCTTACAAAACAGCTTCAGATGCTGCTGCTACCAACCTTCAA
CCCACGCATCCAATTCGTCTTGGTCTAGCACTCAATTTCTCTGTCTTCTA
CTATGAGATTTTAAACGCTCCTGATCGCGCGTGCAAACTAGCTAAGAAAT
CATTTGATGAAGCTGTTGCAGAGTTAGACGGTTTACCAGAAGAGAGTTAT
AAAGATTCAACACTTATCATGCAGCTGTTGAGGGACAACTTAACTTTGTG
GACTTCTGAAATATCAGGTGGTGAAGGTAa Run BLAST on NCBI protein sequence of TCONS_00072069-protein >TCONS_00072069-protein ID=TCONS_00072069-protein|Name=TCONS_00072069-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MADKEEKVYLARLAEQAERYEEMVEYMTSIAKMDVGLTQEERNLLSVAFK
NVIGARRASWRIVSSIEESRKDTEESALATDYRKKIETELQRICNEILDL
LEKHLIPSSTVEGDSTSAASNTEQKEAHVFYYKMQGDYLRYKAEFTAGND
KKEAAEASLLAYKTASDAAATNLQPTHPIRLGLALNFSVFYYEILNAPDR
ACKLAKKSFDEAVAELDGLPEESYKDSTLIMQLLRDNLTLWTSEISGGEG Run BLAST on NCBI transcript from alignment at scaffold_70:58538..72848- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072069 ID=TCONS_00072069|Name=TCONS_00072069|organism=Clytia hemisphaerica|type=transcript|length=14311bp|location=Sequence derived from alignment at scaffold_70:58538..72848- (Clytia hemisphaerica)
TCTCTCGGCCCGAACATGGCCCGAAGAGGCCCGAGAATTCTCGGGCCATG
TCGAGGGTCGTAACTGTTGTAAAATTGAAAATTTATCATTCCACATTGGA
AGTATTTTCGAACTTTTCCTAGATAGAAATGGCTGATAAAGAAGAGAAGG
TTTATCTCGCACGTTTGGCTGAGCAAGCTGAGAGATATGAAGGTAAATAC
ATATTATTTTATTTTCACATATTTTTTGACATCTCATCTTTGCCTTTTCT
TTTTACAGATTTGGTAGGTCTTTCATTTTGCCTTTCAGTTGAGAAAGTTA
GCTACTCTCAGGTGCCTAATAAACTTGCCCCCACGCTTATTAATTTTTCG
AAAATTTCTTATCAAGTATTTTTTTTTTAGATAGACTGCTAAAATAGATA
GACCTTTTCGCCTTTCCATCCGCCATCTTGAATTGTATGCAAAAATACAG
GAAAGAAAAAGCTGTGGTTGGATTTAGTTGGAAAATATGCACAACATATG
CAAATTTACACAAAGATTAAAAAGCCAACAAAGCATCTTATAAAGAAATA
TTGGGCTCTTCCAGTTAAAGTCCGTTATAGGGGGGTGGACAACAGCGGAA
TTCCGAGGCAAAATGTTTTTTTGAAATTCCTGGATTTCCAATACAAAAGC
AATTGAAACTCCTGGATTTCCGATACAAAATCAATTTTTTGGTGGAAAAA
TCTGGAATTTCCGATACCTTTTTCAAAACTTTGACAAATTGTGTGGAATT
TCCAAGGGTTGAAATAATCAACATAAAAGGGCTTGCGGAACGAGCGTTCT
GTTTTCGCAAAGCGAAGAAATTTCAAAATGTATAAGAAATCGACGACTCC
GTTATTAATACAGAATTTAAAAAACAAACTAATAAGACCTTTACATTTCA
CCATTTATTGCCAGTGAGTCATAACAGCAATGTCAAAGAAGAGAATGTTG
GAAAAATTAAAGACAGATAAAAAAGTAATTTGTACTCGATTTTGTAATAC
TTTTGTAGTAGTTTCAAAAAATCTTCCTGGAAAAAGTATAAAGATATCTG
CTCAATACAACTTTTCACAAGGTAAAATAACAAAAATAAAAAACTAAATC
TGTAAAGAGTAACATCGTAGCATGGACTTAATAACATAGGGGTATTACAG
TGGTCTTTAAAAGGGTAACACAGAGTATTTCATACAGGGCTTNTAGAATT
CCCTTGAAGAGTTCCTAAGAGATATTATTTGTAATACACTCAAAACAATC
CCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTAT
TAAAAAATAATGTGTCTGTTCTTCGCAGCATACNATGAGTTTTAAAAGAT
CCTGCTAGAATTTTTCAACAAACGTATCCTGTGAAAAAAGACCCGTCAGG
ACTTTTTGATAGTTTAGGATAAAGAATAAAATCCATTTTTACAAAAATAT
CACTAATTTATAATTCACTACTAGTTTTCATACATTCATGGATGCAATCA
AAAANTACCCAATATTCGATGGCATAATGGTCTTTTTCGTAAAAGCGTTT
ACTCACAAATACGTTGAACCGTGTATTGACAACAAAAATCATTGTTCGGC
TGAATATAAAGTTTAACCATGACATAACATTTCCAGTAAAATTATAAAGT
CTAAATGTTAAAATATTTCGAAATCCAAATGTTGTCTTAAATCTGACTTA
ACTGTGTTGCAGATATTTGGTTTGATCTCAAGCCATTAAAATAGTTTTCG
ATGAGATCAATTGATGTAATGGGAATGGTAACTCCAATCAATTGTCACAA
AAATGTGCCATGCAGTANTCAATTGATGTAATGGGAATGGTAACTCCAAT
CAATTGTCACAAAAATGTAATGTGCCATGCAGTATGGATGCCACAAGGGA
AACAACCATCTGTCAGACCATTTATCGAAAATTTCAGTTAACAAAAAAAA
ACAAACAGCCACACATTGTCACATTAGCAAGTGGATGGTAGGACAGCTCT
CCTCTCCCAGAGGAAGTGGTAAAAAACCTCAAGAATGATACTCGAGTAAA
ATTTCCAATAAGTGTGAACAGCAGCAACGTCATTTTACAAGCAAAAGATG
CCTTCCAGCTTAAAAAATCAGTAGGATCCTGCCTTGACAAAAATCGCCAT
CTTTGTTTCGCAAGTGTGCAAAAATGAACGTAGCAGCAACGACATAAAAA
CAAACATCTCGCACTTGATTGGATAGTCAAACTCGATATAATTTTAAAAA
CACTTTTATTTTATAAAATAAAGAAAAGTCTACTTTGCTCGGTGTTTTTT
CGTGAGCCAAATCGGTAGCATTTCTCGAACATATACAAATTTACGTCCCG
CGTACGCAGATCTTGCCAAAGGAGCAGAATTTCCGAAACACTTTGAAAAA
TTGACTGGATTTCCGAGTGCTTTTTTTATCTGAAAATTCCCGTCATCCAC
CCCCTAGATCAAATTTTTTTCTGGAAGAGCCCATTATAATCATTAGAACA
ATAAACGATGGAATTTCTTAATCCAAAAAGAAATATTAACAGAACAACAA
AAGCCTTTTAGAAATTTGTTCTTAAAGACATAGCATATTCTGTTTTCATG
CCATTAAAAAAATCCACGAAGACGGAGTACACACATCAACTTTCAAAACA
CGCAAACTGAAAGCAGTAATTATGACGTCACACATTCAGCGGGTTCAGAT
CAATGTTTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGTGATTTTTCAGCTTGAGTTTATGTCTAATGTTAT
GGTTTTTTGAAGTGCTTGTTCTAAGACGTATGAGCGAATTTTATTATTTC
TAGTTTTCAAAAGAAGCAAATTTAATCTTTCTTCTACAAGATTACATTTT
AATATAATAATTTTGCATGTAAGTTTTATATTAATACTTTCTTTTTGCAT
ATGTTTTGCATACTTTCTAAGGGAATTTCACCACGGCAATTCGGCCACCA
TAATTTTTGCATACAATTCAATATGGCGGATGGAAAGGCAAAAAGGCCTA
TTCATGTAATACAGTACTGTACTTATTTTACAAGAGCTTGTTACAGTAAT
TTTTGTTGTTTCGTGGCATTTTCATCTTTTACTTGTATTAAAACATTTAG
TCTTATTGTTGTGTTAGGCGGCAATCACAAATATCTTCATTTCGCGTCCT
CGTTGGGTCTAAAAAGAGTTAGTCAGCCGGTTGGTCGGTCGTAAAAATTC
TGAAGAAGCAGGAAAAAATCTGGAAAAAACAAATTGTTATTTTAGCAGTG
GATAACAATCCTTGATATTCAAAAAACTCAACATCCTTACTGTATATTAG
TCCGGGAGCTAAATCCTATATCTCCTTAAATAAGCACTTTTGCTTAACCC
AAGATTCTACAGGATAAACTATACATTTTTGGAATCCTCAACTATCCTAG
ATTTGGAAATGGTCGGTCCCCAAAGCTAACTCCTGGTCAATTTTTCATAC
TGGGCCCGAGTTTAGGCGGTACTTTTTACCCTTTGTAAGGATTTGTTAAG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAATACGTCATTATTTTGTGTAGTTGTC
AACAAAAGTACTAAGAAATGACTGAAGGGTATATAACTGGTTTCAATCTC
AAAGTATATAAATTTGAGGCTACCATACAATAAAAACATCCAAATTCAGG
CAACAACTACCAAGAAGTGGTGTGATTACCCCCTGATTTGCCCACAGTGA
CCCTGATTACAGACAATGAAAACCACAAATAACTTTCCCATTGCTCCTAC
TACAAAATTATCCTTGTTTCAGTGGTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACTTAAAAAGGGTCAAAATTTAGTTTAAATACACAA
ATTTTTCCTTTTTTCCCCCAGGTAAACCTATAAAAATAATTTTTCACAAA
AATTCTTTGCCGAAAATAATCATCAGCCTACCTTGAAACCTTGAAACTTT
TTGCAAAGTTTCAAAGCAATTGGTCAACTGACTGACTAGATACAGCAAAT
TATATCATCCCTGGAATGGCATTTTCCTTAACAAATCCTTACAAAGGGTA
ACAAGAATCGCAAAATTGCGACTAAATATTTCCTTAAAAATGAAGGTCAT
TATTGACATATATAAAAAAGCACACATAATAAAGTATACATATATATTTG
TCCAGAAAGAACTGGCATGTTGTTTGCTTTGTTTTGGTGTTTAAAAATAT
GTACTTATCAGTCCTGAAAAAAAATACAAATTTGAATATAATGAGGGCAA
TAAGTCTGGTTAAATGTTACTTTATTCACAAGATTTAAGGATTACTAAAA
AAATACTACTGCAGATGAACTAAACTCAAAAACTAAAACTTTACAATAAA
TTTACATTACGACAAAGTAAAAATCTATCTTTAATAGCAACAAAGAAAAG
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTAAGCGAGTTTCTATTTTGCAATTTTTCT
ACAGAGCCAAATAAAGATTTTTTCTATTGTTCTTGCTCGATTGCCTCTAA
CGATAAGTTCCGTAGTTATGTGGTTATCGAGACAAAATGTGACGAATTTG
CGCGGAAACGAAATTTAACATTAGTCTAGGCTGACAAGAAACTTCACTCT
CCCCCGTAAAAAATGGTAGGAAACATCCAGTCTGCCAGTTCTCATAAGAA
AACCCAGCAGAGAAATGGTAGGTAAAGAACTCCTTTTAATCATAACTTCT
TTTCCTCTTGATGAATTTTTGTGAAATTTTCAGGNNNNNNNNNNNNNNNA
ATACATAAAATTGTCATTAATATCATGTTCAAACATCTAAAACATTCTCT
TTAAAGGAAGGAAAAAAAATGGCAATGTTTACATTTCTCTAACCTTCCAG
CCACAGTACTAAAGTGAGCATTTTTACCTACCGCTTCTACGGTGGAGATG
CGAGACTGTGAAACGGTGTATTCCAACAAACAACAATCAATATACCGTAA
CATGATCCCACGGTGTAAACATTATCAACCAACAAAACCCACACCACCAA
AATTGTAAAAATAAGTCAATATAATTTCTATCAACAATTTCTCGTAAAAT
GTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCACGGTCATGGTGAAGCTAAAGATTTATCAAC
CAAACAAAACTGACGCCAAGTCAAATCTGTCGCTTAAAAATTTCCATGAA
AATTACAATCGAAACTTATCCCATATGCTTTTTTCAACATTCTGGAGGTG
TTCAAAGTTAGAGGTATCATATGTAAGAGCCAAGCATACATGAAAAGTCA
TTTGCTATCCCATTTGTCATGAGATATACAAGTTAAGAAATCAAACAATA
ACCCAGATTCGGCGTACTGTGCATGAATTCCAGACTGGACAATAACCAAT
AAATCATGTCTCTTCACTTTCATGTCCCATCGTGTTTATGGGGTAACCAG
AAAGTCAATCCACAAGAACAGCCATCTTCCTTTATTATAGAGTGTTCCAA
AACTATAGTAGTAGGTTGTTTGGAAGTAAAGAAACCCACACAGTTTGATT
TATTTTAAAGATTTAACTTGGTGAAAACAAACTGCATCTTTCTTTTCTAG
CAAAAACTCATGTTTCAACCTGCTACATAACAATTGCCAGTCGGGTCTGC
TACTAACATGTAATAGTTTTATTATAACCGGGCTTGAGAATCCGTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATCTGCCATTTTCA
GTGCTTTCGAAAAATTATTTCTTGCTGGCACGGGGTAAGCAGACGATTCT
TTGCAAAGGTGATTTTTTGTGTTTTGAATATAAAATAACTTTGGAAATAC
TTAACCAATTTTAAGGACACATAAAAGTACTGACAAAATTTGTAAACAAA
CCGCATGTCAGCGGGATACAAAATCAAAACAAATGTCACATATCAAAACA
AAAAGTAAAAACAAATATGGCTGATTTTTATTGTTCAATTGTTTTTACAA
GTTTCTTTTGGACACGTGATTTTAATTGTTCTCTTTAATGACACGTGGTG
GTTCGAGCAATGTTTACATTTTACTACTTTTATGTCTCTTTAATAAATGA
CCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAATTAAAATTAGTTTGG
TTTTCAAAAATTAAGTGGAAAATTTTGCCCTGTCCACTCTAAATGTGGGA
NTTGGTTTTCAAAAATTAAGTGGAAAATTTTGCCCTGTCCACTCTAAATG
TGGGATTGTTGATATCTGGCCTTTATTTTCACCTATTTTTATATCTCTTT
GACAACAAATTTGTTTTGATAATTCCACCAAGTTTATCAATCATGCTTTC
TGTTATAACATTTCACAATAATTTTCACTGATAGCGCGTCCTTTTTGAAT
TTTTGTTTTCATTCAAAATGACTGGCTGCCAATTGGAAAATCAGGGAGCG
CCTGCCACCTAACTGCCTCCCGCCCGATATGATGAACAAATAACGAGTGT
GTAACTTGCTGCGTGAATAACAAGCCTTTTAAATAAAAGCAGAATTTTCG
TGACATTGGAGTCAGATTTAGATTTTCTGTCCAGATTAACAAAAGCTGGT
TGTAACACTGCATTTAGCAATATTTTTAATTTTTCTTTTGTTTTCATTTA
GAAATGGTTGAATACATGACATCCATAGCAAAGATGGATGTTGGTCTAAC
CCAAGAAGAACGCAATTTGCTGTCTGTTGCTTTCAAAAATGTGATTGGGG
CTCGTCGTGCATCTTGGAGGATAGTTTCGAGTATTGAGGAAAGCCGCAAG
GATACTGAGGAGAGTGCATTGGCAACTGATTACCGTAAAAAGATTGAGAC
TGAATTGCAGCGGATTTGTAATGAGATTCTCGATTTGTTAGAGAAACATT
TGATTCCAAGTTCGACAGTGGAAGGAGATAGTACCTCAGCAGCATCAAAT
ACAGAGCAAAAAGAAGCTCATGTCTTCTATTATAAAATGTAAGAAAACCT
CCTTCTCCTTCAAAGACCAAACTTTGTTACNTATAGCCTAGAAACCAATA
AATCCCTCCCAGATCGAAATATTCGATGAAATCAAGTTGAAGGCCTGAAA
ATTGACATTCTCGCTCGAACTTCAATTTTCGAAAAATTGTAAATTAGCCA
AAAGTGCCAATATATTATGACACTGATTGTGGCATCTAAATATTTAGTTT
AACGTGTTAACTAAAGGATGGAGCTCAGCCACAAAATTTAGTTTCTACTA
AGTTTTATGTCATTGAAATAGAATAGATCAGGGCCTTTTATTTTGGAACT
TATTTTAAAGAGAACTTAATTACGCTAATTATTACAAAATACTAATTCAA
ATAGATAAGGACTCAACGATTACTCCAATTCTTCTTTAGAATTAACTTTC
TAAAATAATTTTTCATTTAGATGACAAAGAAGATTCANAAACCTCCTTCT
CCTTCAAAGACCAAACTTTGTTACTTCACTTCTCAGTCTTCTATACTTCA
ATTTGAATGAAAAACAAAAAAATTTCTAAAGAGGTAAAAGGTAAAAACAT
TTTAAAATTACGGCCCTCACTAATCAGTAATAATTATGGTTAAAAATTAC
AATTATTCTCATTCCTTTCAAAATCAGATATAACCATTGACCTTTATATA
GACCCCATAGCCAGTTTCCCAATCCCGTCCAAGCAAAATATTTTGATCGG
AGTTTTTTTTAAGTGGTACCTGCATCGAGAGCGCTAGGTCTACTTCTCTT
GCACAGTTGTGGTATAGCGCCGTTTGTCATTAGGTAAGATTTTAACATAC
AATGCCTTTTTTGCGAGTACCCCTTAAAAAATCTCCGATCAAAGATGGCG
GATATAGCGAAATATATAATGAATAATAGAATTATTTAACCAAGTTTAAT
TTATTCTCAGGCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCA
GGGAATGACAAGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAAC
AGCTTCAGATGCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTC
TTGGTCTAGCACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCT
CCTGATCGCGCGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGC
AGAGTTAGACGGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCA
TGCAGCTGTTGAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGT
GGTGAAGGTAA Coding sequence (CDS) from alignment at scaffold_70:58538..72848- >TCONS_00072069 ID=TCONS_00072069|Name=TCONS_00072069|organism=Clytia hemisphaerica|type=CDS|length=2250bp|location=Sequence derived from alignment at scaffold_70:58538..72848- (Clytia hemisphaerica)
GCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCAGGGAATGACA
AGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAACAGCTTCAGAT
GCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTCTTGGTCTAGC
ACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCTCCTGATCGCG
CGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAGAC
GGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCATGCAGCTGTT
GAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGGTA
AATGGTTGAATACATGACATCCATAGCAAAGATGGATGTTGGTCTAACCC
AAGAAGAACGCAATTTGCTGTCTGTTGCTTTCAAAAATGTGATTGGGGCT
CGTCGTGCATCTTGGAGGATAGTTTCGAGTATTGAGGAAAGCCGCAAGGA
TACTGAGGAGAGTGCATTGGCAACTGATTACCGTAAAAAGATTGAGACTG
AATTGCAGCGGATTTGTAATGAGATTCTCGATTTGTTAGAGAAACATTTG
ATTCCAAGTTCGACAGTGGAAGGAGATAGTACCTCAGCAGCATCAAATAC
AGAGCAAAAAGAAGCTCATGTCTTCTATTATAAAATATGGCTGATAAAGA
AGAGAAGGTTTATCTCGCACGTTTGGCTGAGCAAGCTGAGAGATATGAAG
GCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCAGGGAATGACA
AGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAACAGCTTCAGAT
GCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTCTTGGTCTAGC
ACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCTCCTGATCGCG
CGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAGAC
GGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCATGCAGCTGTT
GAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGGTA
AATGGTTGAATACATGACATCCATAGCAAAGATGGATGTTGGTCTAACCC
AAGAAGAACGCAATTTGCTGTCTGTTGCTTTCAAAAATGTGATTGGGGCT
CGTCGTGCATCTTGGAGGATAGTTTCGAGTATTGAGGAAAGCCGCAAGGA
TACTGAGGAGAGTGCATTGGCAACTGATTACCGTAAAAAGATTGAGACTG
AATTGCAGCGGATTTGTAATGAGATTCTCGATTTGTTAGAGAAACATTTG
ATTCCAAGTTCGACAGTGGAAGGAGATAGTACCTCAGCAGCATCAAATAC
AGAGCAAAAAGAAGCTCATGTCTTCTATTATAAAATATGGCTGATAAAGA
AGAGAAGGTTTATCTCGCACGTTTGGCTGAGCAAGCTGAGAGATATGAAG
GCAAGGTGATTACTTACGATACAAAGCCGAATTCACAGCAGGGAATGACA
AGAAAGAAGCGGCCGAAGCATCTCTACTTGCTTACAAAACAGCTTCAGAT
GCTGCTGCTACCAACCTTCAACCCACGCATCCAATTCGTCTTGGTCTAGC
ACTCAATTTCTCTGTCTTCTACTATGAGATTTTAAACGCTCCTGATCGCG
CGTGCAAACTAGCTAAGAAATCATTTGATGAAGCTGTTGCAGAGTTAGAC
GGTTTACCAGAAGAGAGTTATAAAGATTCAACACTTATCATGCAGCTGTT
GAGGGACAACTTAACTTTGTGGACTTCTGAAATATCAGGTGGTGAAGGTA
AATGGTTGAATACATGACATCCATAGCAAAGATGGATGTTGGTCTAACCC
AAGAAGAACGCAATTTGCTGTCTGTTGCTTTCAAAAATGTGATTGGGGCT
CGTCGTGCATCTTGGAGGATAGTTTCGAGTATTGAGGAAAGCCGCAAGGA
TACTGAGGAGAGTGCATTGGCAACTGATTACCGTAAAAAGATTGAGACTG
AATTGCAGCGGATTTGTAATGAGATTCTCGATTTGTTAGAGAAACATTTG
ATTCCAAGTTCGACAGTGGAAGGAGATAGTACCTCAGCAGCATCAAATAC
AGAGCAAAAAGAAGCTCATGTCTTCTATTATAAAATATGGCTGATAAAGA
AGAGAAGGTTTATCTCGCACGTTTGGCTGAGCAAGCTGAGAGATATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072069-exon-scaffold_70-1575043694:72657..72848 | TCONS_00072069-exon-scaffold_70-1575043694:72657..72848 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1575043694:59811..60147 | TCONS_00072069-exon-scaffold_70-1575043694:59811..60147 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1575043694:58538..58888 | TCONS_00072069-exon-scaffold_70-1575043694:58538..58888 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1510915933:72657..72848 | TCONS_00072069-exon-scaffold_70-1510915933:72657..72848 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1510915933:59811..60147 | TCONS_00072069-exon-scaffold_70-1510915933:59811..60147 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1510915933:58538..58888 | TCONS_00072069-exon-scaffold_70-1510915933:58538..58888 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1491911889:72657..72848 | TCONS_00072069-exon-scaffold_70-1491911889:72657..72848 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1491911889:59811..60147 | TCONS_00072069-exon-scaffold_70-1491911889:59811..60147 | Clytia hemisphaerica | exon |
| TCONS_00072069-exon-scaffold_70-1491911889:58538..58888 | TCONS_00072069-exon-scaffold_70-1491911889:58538..58888 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_70 | supercontig | scaffold_70:58538..72848 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019904 | protein domain specific binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0019904 |
protein domain specific binding |
Blast
BLAST of TCONS_00072069 vs. Swiss-Prot (Human)
Match: 1433E (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 6.997e-114 Identity = 168/250 (67.20%), Postives = 199/250 (79.60%), Query Frame = 3
Query: 129 MADKEEKVYLARLAEQAERYEEMVEYMTSIAKMDVGLTQEERNLLSVAFKNVIGARRASWRIVSSIE---ESRKDTEESALATDYRKKIETELQRICNEILDLLEKHLIPSSTVEGDSTSAASNTEQKEAHVFYYKMQGDYLRYKAEFTAGNDKKEAAEASLLAYKTASDAAATNLQPTHPIRLGLALNFSVFYYEILNAPDRACKLAKKSFDEAVAELDGLPEESYKDSTLIMQLLRDNLTLWTSEISG 869
M D+E+ VY A+LAEQAERY+EMVE M +A MDV LT EERNLLSVA+KNVIGARRASWRI+SSIE E++ ++ + +YR+ +ETEL+ IC +ILD+L+KHLIP A+NT E+ VFYYKM+GDY RY AEF GND+KEAAE SL+AYK ASD A T L PTHPIRLGLALNFSVFYYEILN+PDRAC+LAK +FD+A+AELD L EESYKDSTLIMQLLRDNLTLWTS++ G
Sbjct: 1 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIP-----------AANT--GESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG 237
The following BLAST results are available for this feature:
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