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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072066 ID=TCONS_00072066|Name=TCONS_00072066|organism=Clytia hemisphaerica|type=transcript|length=478bp
ATTCGTTTTCAATATTGGACTTCATTATTATACCAACTTCAAGATACAAC
AGCGGTATTTATCAAATGGAAAATATAGTTACAGCGTGTCAGCCAATGGA
ACCATAATCCAGAGTCTGATCAACCACAATGCAACACAGTTTTACAATGT
TATGGTTTACGCTAATTACCCACGGCCCTATGTTCCTCTCAACACTCCCG
TCGATTTCGCCTTTGTTAAGGACTTGAAATTCACTAATTTCTTGTAATAC
ACAGGAAAAACAAACTTATATAAAAAGCAAGGTAGATATTTATAATTGAC
GCTTGTTTTGCTTTAATCAATCGCCACTCTCAAAAGCTCACCAAATCTGA
CCTTCacgttttgagaaaatttagtCAAATTTGAATTTGGGTGAAAAATC
CATCCTCAtagtgcattttcttgaaaatcttttattcaaaggcaaaaaat
tttcagatttcccccactaaacatcaag Run BLAST on NCBI transcript from alignment at scaffold_70:178400..180253+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072066 ID=TCONS_00072066|Name=TCONS_00072066|organism=Clytia hemisphaerica|type=transcript|length=1854bp|location=Sequence derived from alignment at scaffold_70:178400..180253+ (Clytia hemisphaerica)
ATTCGTTTTCAATATTGGACTTCATTATTATACCAACTTCAAGATACAAC
AGCGGTATTTATCAAATGGAAAATATAGGTTAgtacacccgggggggggg
gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCcctt
atcccccccccccccccagcagaCTTTGGGCCcggcccccgggggggggg
gggtactagggctggcgaatgaggggtatgtgcggacgggacctccgaaa
accgactcttagagagactgatttttgctgaaaaggtgagagactttttg
aaaaattttcttggattttttgaaaaaaatagtaaccttagagagacttt
tttataattttttcacctgaaatcaaaaaaattgtctaaaatggtgaatt
ttccgacccttagagagactaattcaaaactttctgatttttcctaccgt
tagagagactttgaagggtgaaaaagccgacccttaccgtccgcacatac
ccagcacccatttttgcctaagtattcCCCAGGTTAGTACACCTCTTTTT
ATGTTCTTCCATTGAACTTTTTTAGGTGATAAAacatccccagaatttat
tttgatacccggggggggggcagtcaggcaaattgaccgacgggtatgtg
cggcggttaagggtacgtttttcaaaatagcagaaatgcactgtaaggat
agacttttgataaatgcactgtttgagtggaaatttcagcaaatctagga
aaGATTGCTAACTTTTGCccgaaaatctttattttttttctctaagagtt
taaaatttgaaaaaatgcactgtaagggtatgaatttcaccgattttttt
ctgcactgtaagggtacgattctaagagccaattttttcgccgcacatac
cgtcagtgttggtaaacccactgcccccggGTTTTGATacaggggatgcg
tatcgtgtatagaGTTCCCGTCCGATAGTTACGCCAATTTTGGGGTAAcc
tatttcaaaagtttcaaaaatccaatgattgtattaacctctaaccattc
aaatttttagttataatcaagtttctaaactaaaaaaaaaacaaagactc
TCGGACGGggattttatacacgatacgcagccgctactttaggcgtacaa
actttcgcgagcagaaacttttgcgaggacgaaaaatcgcgaaattcacg
acatttactttcgcgaatttaaggtaaaattatttttcgtgagcgtaaac
tttcgcgaatcaagacgtaaaattgagaattttcacatgaaaagataact
tagagggacaaatacttcttggattggcatgaaacatttgtcctttgact
tattagtcttttagcaggctaaaaagtggcATAAAAGTTTTTCTCCGCTG
TAGATTATATTGGAACAGACATTACACTATACATTTATTCCTTTGTTATC
CCAGTTACAGCGTGTCAGCCAATGGAACCATAATCCAGAGTCTGATCAAC
CACAATGCAACACAGTTTTACAATGTTATGGTTTACGCTAATTACCCACG
GCCCTATGTTCCTCTCAACACTCCCGTCGATTTCGCCTTTGTTAAGGACT
TGAAATTCACTAATTTCTTGTAATACACAGGAAAAACAAACTTATATAAA
AAGCAAGGTAGATATTTATAATTGACGCTTGTTTTGCTTTAATCAATCGC
CACTCTCAAAAGCTCACCAAATCTGACCTTCacgttttgagaaaatttag
tCAAATTTGAATTTGGGTGAAAAATCCATCCTCAtagtgcattttcttga
aaatcttttattcaaaggcaaaaaattttcagatttcccccactaaacat
caag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072066-exon-scaffold_70-1491911889:178400..178477 | TCONS_00072066-exon-scaffold_70-1491911889:178400..178477 | Clytia hemisphaerica | exon |
| TCONS_00072066-exon-scaffold_70-1510915933:178400..178477 | TCONS_00072066-exon-scaffold_70-1510915933:178400..178477 | Clytia hemisphaerica | exon |
| TCONS_00072066-exon-scaffold_70-1575043694:178400..178477 | TCONS_00072066-exon-scaffold_70-1575043694:178400..178477 | Clytia hemisphaerica | exon |
| TCONS_00072066-exon-scaffold_70-1491911889:179854..180253 | TCONS_00072066-exon-scaffold_70-1491911889:179854..180253 | Clytia hemisphaerica | exon |
| TCONS_00072066-exon-scaffold_70-1510915933:179854..180253 | TCONS_00072066-exon-scaffold_70-1510915933:179854..180253 | Clytia hemisphaerica | exon |
| TCONS_00072066-exon-scaffold_70-1575043694:179854..180253 | TCONS_00072066-exon-scaffold_70-1575043694:179854..180253 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_70 | supercontig | scaffold_70:178400..180253 + |
Blast
The following BLAST results are available for this feature:
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