TCONS_00072058 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072058
Unique NameTCONS_00072058
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1262

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072058 ID=TCONS_00072058|Name=TCONS_00072058|organism=Clytia hemisphaerica|type=transcript|length=1262bp
TTGAGATCTGTAATTTGCCACatcttgaaaacgaaagtgaagcTACATTT
CTCGCTCCGCCCATCTTCATAAAAAAGACGAAGTTCCCAAAAAAAAGTCA
GGCAAAGAACGaataaattttcatcttttcagAATGGTTCTTGTTCTTGT
TCTCGGTGACCTGCACATCCCACATCGAAAAAGTGGATTACCAGTAAAGT
TCAAGAAGTTATTGGTACCAGGCAAAATTCAACACATCTTATGTACAGGA
AACCTTTGTACCAAAGAATCATATGACTATTTGAAAACATTAGCAAGTGA
CGTCCACGTTGTTCGTGGTGATTTTGAAGAGAACATAACATACCCAGAAC
AGAAAGTTGTGAGTGTTGGACCTTTCCGTATTGGTTTATGTCATGGCCAT
CAAATTGTTCCATGGGGCGATGCGGAATCGCTTGCTATGGTTCAAAGGCA
GTTGGATGTTGATATTTTGATCACAGGGCATACACACAGATTCGAAGCAT
ACGAGCACGAGGGAAAATTCTACGTCAACCCAGGGTCTGCAACTGGTGCA
TACAATCCTCTAGATTTaaacatCGTCCCCTCTTTTGTGTTGATGGATAT
ACAAGCAGAAACTGTAGTCGCATATGTCTACCAGCTTCATGGAGATGACG
TCAAAGTCGACCGAATCGAATACAAAAAGACGGCAGTCGCCTCGTAAAGT
ACCTTATAATATTTTCTGTCACTTTTTTATCACTCtgtaattttttgtat
ttttcattttgaccgCACTTCTTTTCAACTCTCTGCGCTTCATATGTAAT
TATTACCAAGTATTATCAGAATGAAGGAACCTCGCAGGTTTCATTAGACC
GTTTTGTTTTGTCGATCAGCTCTTACAAGCGTGAACCTAGTATGATGAGA
TGAAGGAACCCCATCTCTGATTATCTTAGTTTTTAGGGTTCTAGCTCAAA
ACTTATCTTCAAGAATTATCTTAATaccattttaagtttttgttgttttt
agtcTCTGTGGGTTATACAAtcaatttaagatttttttcgtatttttgta
atttaaaaagatttattttaattcattttcacAACCCTTCATACAGTAAT
ttcattctaaaattttcatttttatcataaTGATCAACAGTAAAATGTGT
TTGAAAAACTGGTTAAAACTGCTGtagatttttggacctacctccgggta
ccccggtggaggtcctttaaattaacccatgtccgtccgtccgttcgttc
gttcgtctgttg
Run BLAST on NCBI

transcript from alignment at scaffold_70:92192..102202+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072058 ID=TCONS_00072058|Name=TCONS_00072058|organism=Clytia hemisphaerica|type=transcript|length=10011bp|location=Sequence derived from alignment at scaffold_70:92192..102202+ (Clytia hemisphaerica)
TTGAGATCTGTAATTTGCCACatcttgaaaacgaaagtgaagcTACATTT CTCGCTCCGCCCATCTTCATAAAAAAGACGAAGTTCCCAAAAAAAAGTCA GGCAAAGAACGaataaattttcatcttttcagAATGGTTGTAAGTAATTT TTGCTCATACAGTATCTTTTATCTAGAGAGCTGATAACACATAACGAtcc tttttattcattttgaaacCTTTTAACAGCTAATTGGAATGAGTGTGCTt gaggaattttatttttcaatctcAGCAACTATCCTGTCTCCTTCTTCGAA gttactttttatattttttcattgttttattcTGTTGAATgataatgggc tattccatcTATTGCATAGTTTACTTTCCTAAAATGGTTCAAAATTGACA ATTCACAGCAAGGATATACCCCAAACATTTTTgggtcatttttattttta tttattccaGTTGAATCACTCCACCTTACCGGCGGgcaaaatatacaaaa ttttgcaaattcttGTCGTAATTATATTATTTCTGGTTATAATTATATTA TAATACCACTGATATAGTAATACGAAAGTCAGTAGAAGAAATTCAACAGT CGATAGTAGTAAAAAAGACTAACTTCTACCACCCTCTTGGAAAGGGCGGC AGAGGCGTAGAAGGATACttacttttgatacttttggaTGTGTTTGAGCG TACCGCTCTGGCAAGAATCTTTTGATCCACACCACAATCTTCATTCAATC CATAATTCCTGAAGGAAGAAATGGATCAGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTGTTT GATTTCACACCATTAACCACTACAGTTTGTTGCCTGTCTCTCAAAAAGGA CTCTATCCAATTATAGATTTTACCAGTtattccaagccttttgaatttcG ACAGAACAATGGAATGATCCACTTTATCGAAAGCTTTAGAAAAGTCCAAG TAAACAACATCTACATTGGTCTCTTTGTCCAGTAAAATTTTCCCGAAAAC CTGGCCCTCCACACACGCTCAGAACATGCGCGGACAGTTCTGGTTGTGTG TTTGGGACTTTTTGAAGTTCAAAACAGTGAggcatcttttggtctttggg tttgtttctgacatttttccttcaaagaatatcaatcactttccttTCCC CCTCGAGTGcacgagaaaaaaatgattagcttgcATTCtcgtgcgggcga ataaagatgaggcgggaatcttgcactgagggtgctacttagtttccgcc ccattttgcgcccacaatagaatggtctaaatacgggggtattcaatgat aaacgatgtcgttctgtaagtgtttgtTTTCTAAGAGacacaaatagtat attgaatattatcaacttttttttaaagtatttttgagcccaaatttaaa tatctggttaaataaaaaacaaatgatagcagttctgtttttcctcaaac ccccgggaaaagtttttttgacgacttagctattttacaaatttcggaaa agaacttccataggaattccgatacattcCGTTCATTTTGGAacagcttc aagaaagtcataatggcagatgattttaaaagtttctgaggaaatgtgtg gagTTTATGGATGTCAGATGTTGATCGCTTGTTGATTCtttgtaaagaaa aaagataacaggtatagcgttttctaatcctggaatatcaaggttccagc tacactgcaAAAACGTGAGGCAATGGATTCAATTGAACATCTCAAAATTC AgtatataattttatttttttcacctttcagaAAAGTTTGAGCCATACCA TGGGttgtcaaaattatcaaaacaattcTGCGCCTGGGATGGCTGAATTT CAAAGTTTATATTGTTCACATATCATAAAGTCTAGAATCGTTCCgttttt ccctaaaaataaaaataggatATACCGTAAAGAACAATTAGGCTTTTAAA TAAAGTGTCAAATTAAGAAAAGTATATACCGTAAGTcagtctaatgtcaa catccctcttctaattccgacacccttccttagagataggaataatatga aggtcggaatcactgatagaaaaaagattttctctctgattgctaagcaa aaaaaaattagtttcaatcagcgattccgaccttcctattattccacCTC CAAAGAAGGTGCCAAAATTaaaagagggatgtcaacattagaccaaattA CGGTAATATCGATCCGCAACAAAAAGTTTACtgattcttatgaaaaatag ggtagaaaatgattttggaaaatccagtttggaaacaacaaaaactcAAA CAGGCATCATGTTCCAAACTGAAACTACatccacaaaaaaacaaaaccta tGTGCGGGCTCCAAACAAATGGgaataataaaaaattgttagatattttt attacattttattgggataagaaaatataaatatataCCTTGGAAATTCC AGAAAATGAtctcaaaaatttagaaaatcaaggcCCTCTCAGGAAAATTT CCAAGTCAATAACCCTTGTACAATTTAAATTGCTATACATAGCCCAAATG GCATTATACATTATTGTAATAATTTGTCAAGTTCTTTTCCTAGCCTTTTA TTTTGATCTTTAGCTCTCttattctaatattttttatgataattatcCAA TCATTAATAGGAATGAGCTTCAACTGCAAACCATATTATATTTTAgccct aaaatattcttatgagATTGAAATAGAAGAGCAAGGAATTTTTCTAGTGT GAATAAGAGAAAGAGAACAAAAACTGGGCTAATGCAAGCCAGACTTCACT GTAATTATAGATTCCAAAGaggatttgaaaaattaaaactgaaCGAAAAA TAAtgaagttttgttttttaggccaaaaattattgttgttaattttgttt ttgatttggaaaatttttgctttctttgtgactcttataaaatgttttta taaaaaacttaTAAAAAGTGTGCACTATTTGAAAACActgagaaaatttt taaaagacacAGAGAACTAGAAATGCAGATGTTTCAGGATTCAACAAAAT TCTACTGAAATTTGTATCACAGAATAAGACATACAAATCTGAAAACTTGA GTGAGATGTAGCCCTCCTGCCTGGTTAAACATCAAAAACGTAAATAACTT TGTACTTGTAAAGGTACACTTATCCTGTTGCAATTGGTTCCAAAGTGTGT CACTTTCAAGCTCACCAATTAGATTTGGGTAAAACTTAGAAATTAAGCTA GCAACTTGAATGAAGACCTCTTTATTACACACTTTTTTGTTCACAAGAAT ACATTTAATAATATTTATTgactaaaaaattaagaatatggtaagaataa gCTATTTTAGAGTATTTCGCTGgttaaattgccaattattcccCATCAAT GATAAAGAGTTCTACAAAATTAACTATACTACATGCTAGATTTTGGCTGG GCTTGGAtccaaacctaagaataccgtaagaatattccAGGATGACTTTT CTAAAATGtaaaaaggttaagaatattcatgatatgatgaattggaaaaa cactattcttataaaaaatacctgTAATGTCTATTAACTCTTTCTTATCT AATATTTCTCAATATTTAGCTTGTTCTTGTTCTCGGTGACCTGCACATCC CACATCGAAAAAGTGGATTACCAGTAAAGTTCAAGAAGTTATTGGTcagt atttttttcattctggAGCTACCTTATGGCCCAGGGGGATTGGGGTTTta gtactaaaatctcagacatatatgagtactaaaaggcttttcattttttt tgcataccGCCACCACTACATTTTAGAGAATAAAATGTCTCAAATTTTAA TCTGGATACCAGGTATTTTAGTAGATAAAAGATAAAaggatttttaagtt ttttgggtGAACACCACATCTCTAAACATCATAATGTCTGATATTTCAGT ACTTACCCCCTCCCTGTATGGCCATGAATAAAGCTCTCTTTTGTCTGTCA AAGGCCATAGAGGTAACTTTCATCACCACAACACCTTGTGTTTTTGAGCC TGCTTAACCCATAATGCTTTGAAGCCATAATATAGCTGATAATATAGTGG TGTAATGTCTAGCATTAGTTGTGATTCTTCGTTGgagttttcttttaaat gaGTATTGTATAATCTAATTCCTCACCCTAAAACTAGCGATGTCTACTCA AGTCCAACATCTTACTGGGCATTTTGTCTTATAGCAAGATTAAACTTATA TTTCAAGTCATGATTACATCACCTTACTTTCAAAGCAGCTttccatttca ttttctttttcttttatctcgTCATAATTGCAATTCACATGTTACTGTAt aatgaagcatttttaaacCTTAGGTACCAGGCAAAATTCAACACATCTTA TGTACAGGAAACCTTTGTACCAAAGAATCATATGACTATTTGAAAACATT AGCAAGTGACGTCCACGTTGTTCGTGGTGATTTTGAAGAGGTAAGTTATC ATAAATTTTGGTGATATTATGATAGTGTAATGAGTTTATGTAAAAATTAG ATTTCGACAATTCTTTCAACCCCTTgtttatttggggggggggtggttAT TATCAAAGTCCATGGTTTAGAAAATAGACTTTAAGACCATACCCCCTCTN ggggggggggggtttattATCAAAGTCCATGGTTTAGAAAATAGACTTTA AGACCATACCCCCTCTTTTATGAAGCATTCAACTAAATTGTATAGGCTAA AGTCCGATACATTAGATGATGGAATGAAATTGTTCAGTTCCAATCTATGC AAGCTTAATTCAAAATAATGCCATTTTAGGGCCTCTGGAGTATTTAAGTG TCTTcctaattacaaaaaaaatatttataaaagtaTGAACTcttgacgtt ttttgttttaaagttattAGCAAATGTAATTATCTCATAATGGAAAAATG CACTTAAAGTTGTATTTGATTGTTCTTTTTTGCTGACATACACAGATTCT TTATTATCGTTTACGTACAGAATAATTTTTCTGTATGCTTTTTAACTAGA ACATAACATACCCAGAACAGAAAGTTGTGAGTGTTGGACCTTTCCGTATT GGTTTATGTCATGGCCATCAAATTGTTCCATGGGGCGATGCGGAATCGCT TGCTATGGTAATATCAAATTTCTTCTTTATTCTCTAAAGGCTGTTTATAG TTGTAGACAAGATTACAGAAGAGTCGTATAACAAATACTTAAAAGTGAAG CGTCTCACCTGTCATCTGTCCCAGCAACTTAGAGTTTTCGGACATTttga gggggtttatctaaagaatcctgcattactaaaaatagacaaaaagaacg acaaatttcataaaaaacgacatattttgccgtccacgaccccgaccgaa agtgactgtaccacccctgtACCAACGATTCATTCCCTttcgtttatcac gggaattaactacatgtggtctaaaagaacgacaaattacgcatgcgtgt tacaatgcaggatcctttagaggaacagactgttGTGTTGGTTTTATTAG TTAGTTTCCCACTAACACCAGTCTAAGTTGAGAAAAAATCATCACCGCGA CCATCTTAACAGAAAATTTTGTTGTtagcaaaaatcaaaatctggGTCAA AGTTCATATAATTAGGTCATTTTACTGTTTGAAGAAGTTACTCTTACCTT ATGTACATAATTAAGCACACTTTGTATTTATGTTTTTAGGTTCAAAGGCA GTTGGATGTTGATATTTTGATCACAGGGCATACACACAGAGTAAGTGCTC TGATATATTTTGTGTCTTTCGAATTTCTTAGCTCACAATATTGGCTCATA AATTTGTAAACTTCGTTAATATATTTAGATAAGCTTATGAACCTCGAGAT CTGTCGTGAACATGTTGAAAGGTTGACAACATTTAGGTCTGTGTTTTCAG GGTTTATAACAGGCTAAATAAAtgattaaactttttcttttcttacagTT CGAAGCATACGAGCACGAGGGAAAATTCTACGTCAACCCAGGGTCTGCAA CTGGTGCATACAATCCTCTAGATTTGTAAGTTTTCCTTTTATCTATCACC CTCTTGATTTGCAAGTCTGGTTTTAATCAATCAAAACTTCGGCCTAAACA TACATACAATACACTGGctttctacacgtttttttataagaacaaacaat ataaaaacataaggcttcgattgccaaaatgtcaagaacaagttaaacac tcaatttcttaggaaaatggacaaaaatctcaaaaaatggcaaaataaga acatgcttagaacatttttaggcttaaaacttaaaaagttacgaaaatcc gaaggcttcaaaaatgttcaatgttcttataaaaaaacgtgtactataTT TCtaaacttcagttgagctagagcTAGAATATGACAAtatgtgtgtctgt gtgtctgtctgtcacaaagaCATTGGGGCAGCCTGAGCTCTTCAAAAACG GTCgcgtttgactgaaatttggcacacttgttcattggtgATTATctgtt tgtttgatttttcatttttcaaaagttttgattttcgaGGCTTGGGCAAT AATCTTTGGTTTGTTTGGCTACTATCGGGCCTTTGAATAATCTGAAGcta tctgaagttgagcccattGCGTTGGGCACGTTCGACTGTTAATAATATGA CCTAGAGAAGAGGAACATTTTCGACgaactttttgaaacaaaagatACAT TCCCTAATATTCATTGTGATAACTTTTGGATGGACCGATCGTTGAATCGT TTCTTATGCTAAAGATGAGACCAGTGTATTCCATAAAGTTTATCGTATAA AATCTGAAAAGTTCGCTGgttgtactcttaggttccaaataaacgctccc ccccccgcttgtttaTTTTTCGGACCTTATAAGgaccccgtttattaatt tttaagaattttttcagctttcaaaaGAAGGTCCttctgctctaaatagc ctgcttttagcctatatttaccttatttttgggctttcacaagtacaatt tccaacccccggcaattaggccccccggcaattaggcccccccggcaatt aggcccccccggcaattaggcccccccggcaattaggcccccccggcaat taggcccccccggcaattaggcccccccggcaattaggcccccccggcaa ttaggcccccccggcaattaggtccccccggcaattaggtccccccgttt attaaaattttggaaattttccaccccctccccctctcgtttatttggaa cctaagattACCTACATTGTAAGTAAGAAGATAAATACCCGACTTTCATT TTTGCTTTCACTCTTTACAAATCTTTTCTTTGACCTGTCTTTTAATcgct atttctttttctttagaaacatCGTCCCCTCTTTTGTGTTGATGGATATA CAAGCAGAAACTGTAGTCGCATATGTCTACCAGCTTCATGGAGATGACGT CAAAGTCGACCGAATCGAATACAAAAAGACGGCAGTCGCCTCGTAAAGTA CCTTATAATATTTTCTGTCACTTTTTTATCACTCtgtaattttttgtatt tttcattttgaccgCACTTCTTTTCAACTCTCTGCGCTTCATATGTAATT ATTACCAAGTATTATCAGAATGAAGGAACCTCGCAGGTTTCATTAGACCG TTTTGTTTTGTCGATCAGCTCTTACAAGCGTGAACCTAGTATGATGAGAT GAAGGAACCCCATCTCTGATTATCTTAGTTTTTAGGGTTCTAGCTCAAAA CTTATCTTCAAGAATTATCTTAATaccattttaagtttttgttgttttta gtcTCTGTGGGTTATACAAtcaatttaagatttttttcgtatttttgtaa tttaaaaagatttattttaattcattttcacAACCCTTCATACAGTAATt tcattctaaaattttcatttttatcataaTGATCAACAGTAAAATGTGTT TGAAAAACTGGTTAAAACTGCTGtagatttttggacctacctccgggtac cccggtggaggtcctttaaattaacccatgtccgtccgtccgttcgttcg ttcgtctgttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044754XLOC_044754Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072058-exon-scaffold_70-1491911889:92192..92330TCONS_00072058-exon-scaffold_70-1491911889:92192..92330Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:92192..92330TCONS_00072058-exon-scaffold_70-1510915933:92192..92330Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:92192..92330TCONS_00072058-exon-scaffold_70-1575043694:92192..92330Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:97711..97785TCONS_00072058-exon-scaffold_70-1491911889:97711..97785Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:97711..97785TCONS_00072058-exon-scaffold_70-1510915933:97711..97785Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:97711..97785TCONS_00072058-exon-scaffold_70-1575043694:97711..97785Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:98465..98581TCONS_00072058-exon-scaffold_70-1491911889:98465..98581Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:98465..98581TCONS_00072058-exon-scaffold_70-1510915933:98465..98581Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:98465..98581TCONS_00072058-exon-scaffold_70-1575043694:98465..98581Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:99141..99248TCONS_00072058-exon-scaffold_70-1491911889:99141..99248Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:99141..99248TCONS_00072058-exon-scaffold_70-1510915933:99141..99248Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:99141..99248TCONS_00072058-exon-scaffold_70-1575043694:99141..99248Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:99831..99881TCONS_00072058-exon-scaffold_70-1491911889:99831..99881Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:99831..99881TCONS_00072058-exon-scaffold_70-1510915933:99831..99881Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:99831..99881TCONS_00072058-exon-scaffold_70-1575043694:99831..99881Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:100090..100166TCONS_00072058-exon-scaffold_70-1491911889:100090..100166Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:100090..100166TCONS_00072058-exon-scaffold_70-1510915933:100090..100166Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:100090..100166TCONS_00072058-exon-scaffold_70-1575043694:100090..100166Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1491911889:101508..102202TCONS_00072058-exon-scaffold_70-1491911889:101508..102202Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1510915933:101508..102202TCONS_00072058-exon-scaffold_70-1510915933:101508..102202Clytia hemisphaericaexon
TCONS_00072058-exon-scaffold_70-1575043694:101508..102202TCONS_00072058-exon-scaffold_70-1575043694:101508..102202Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_70supercontigscaffold_70:92192..102202 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.2972 53.5451 47.9526 48.708 46.1188 29.7741 54.1705 58.6457 41.9633 41.1374 32.756 33.3406 26.0327 27.3796 36.97 37.0403 38.0009 32.5098 21.6223 24.4027 18.9596 19.811 21.4276 21.5446 24.3019 27.8615 22.1959 17.6441 35.245 31.1824
Blast
BLAST of TCONS_00072058 vs. Swiss-Prot (Human)
Match: VPS29 (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.784e-107
Identity = 147/181 (81.22%), Postives = 165/181 (91.16%), Query Frame = 2
Query:  137 VLVLVLGDLHIPHRKSGLPVKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLASDVHVVRGDFEENITYPEQKVVSVGPFRIGLCHGHQIVPWGDAESLAMVQRQLDVDILITGHTHRFEAYEHEGKFYVNPGSATGAYNPLDLNIVPSFVLMDIQAETVVAYVYQLHGDDVKVDRIEYKK 679
            +LVLVLGDLHIPHR + LP KFKKLLVPGKIQHILCTGNLCTKESYDYLKTLA DVH+VRGDF+EN+ YPEQKVV+VG F+IGL HGHQ++PWGD  SLA++QRQ DVDILI+GHTH+FEA+EHE KFY+NPGSATGAYN L+ NI+PSFVLMDIQA TVV YVYQL GDDVKV+RIEYKK
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181          
The following BLAST results are available for this feature:
BLAST of TCONS_00072058 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VPS291.784e-10781.22Vacuolar protein sorting-associated protein 29 OS=... [more]
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