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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072057 ID=TCONS_00072057|Name=TCONS_00072057|organism=Clytia hemisphaerica|type=transcript|length=1131bp
tttcagggaaaaaataacaaaaaataacaaagttgCAAATTCTTCGTGTC
CAATTTATATGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGACA
CAAAGGACAATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCAT
CCAGCAACTTCAAAAAAATGACATTCTAACATCCAACAGAGTAGCAAGTG
CCATGGCAAAAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATATG
GATTCTCCACAACCCATTGGATACTCCGTCACTATCAGTGCACCTCATAT
GCATGTCCACGCATTGCAGCATCTTGAAGGACATTTACAGGAAGGAATGA
GCGCACTCGATGTTGGCTCTGGTAGTGGTTACCTTGCTGCTTGCATGGCC
TACATGGTTGGAAAAACAGGATGTGTTGTTGGCATTGATCACATTCCAGA
ATTAGTGGAAAGATCTgttcaaaatgtaaacaaaggcAATTCTGATATTC
TCACAAGCAAGAATTTGGAACTCGTAGTCGGTGATGGACGGTTGGGTTAT
TTGCCACGGGCACCTTTCGATGCAATTCACGTTGGAGCTGCTGCTCCCCA
TCTTCCTCAAGCTCTCATTGATCAGTTGAAACCTGGAGGTCGGCTAGTCA
TTCCTGTTGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTGGATAAA
TCCCCTGATGGAAAAAGTATCGAGAAGAAAACACTAATGGGTGTTATATA
TGTTCCTTTGACCGACAAAGATCGCCAGATGAAGAGTCGATGAATCACGA
GCACGAAATAGTGACATTCTCGAAGGAAGATATTGATTAGATGCAGACTT
GTCTTTTTTGATGGTGCATCAAATTGACTTGTATGTATCAATGGCTGTAA
AAACGGACAATTCTTGGATAAAATTTCACCGAATTTCTCCATATAAAACA
TACAGCTATAATTTATTTAGTTTGAATAAAGACAACACACAAGATAAATG
TGGAGATCATTACAACACTCCAGCTTTTGGATTAATTCGAATTTGGAGAG
TGGTGAAAGACAAATAagacaaataatttttttttttgctcaattttgaa
ttattatttAGGGAAATAAATGAATGCCAAC Run BLAST on NCBI protein sequence of TCONS_00072057-protein >TCONS_00072057-protein ID=TCONS_00072057-protein|Name=TCONS_00072057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
FREKITKNNKVANSSCPIYMVFGTRLLTLFCLTQRTMAWRSHGKDNAHLI
QQLQKNDILTSNRVASAMAKVDRQNYCYENAYMDSPQPIGYSVTISAPHM
HVHALQHLEGHLQEGMSALDVGSGSGYLAACMAYMVGKTGCVVGIDHIPE
LVERSVQNVNKGNSDILTSKNLELVVGDGRLGYLPRAPFDAIHVGAAAPH
LPQALIDQLKPGGRLVIPVGPEGGNQKLLQVDKSPDGKSIEKKTLMGVIY
VPLTDKDRQMKSR Run BLAST on NCBI transcript from alignment at scaffold_70:31584..40971+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072057 ID=TCONS_00072057|Name=TCONS_00072057|organism=Clytia hemisphaerica|type=transcript|length=9388bp|location=Sequence derived from alignment at scaffold_70:31584..40971+ (Clytia hemisphaerica)
tttcagggaaaaaataacaaaaaataacaaagttgCAAATTCTTCGTGTC
CAATTTATATGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGACA
CAAAGGACAATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCAT
CCAGCAACTTCAAAGTAAACATTTATATTTgcaatttgttcaatttttgt
atattttgattGGAATATTGAAATTTACTGTAAAGAAGTTAACATTGATA
TTAGGTTTACGTTCGCCCTTTAATGACCACAGTTCtataaattgaatttg
aaaataaagaaaatttctaatatatttcaaaaaattaaaaatttattttc
cctTAGAAAATGACATTCTAACATCCAACAGAGTAGCAAGTGCCATGGCA
AAAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATATGGATTCTCC
ACAACCCATTGGTAAGTAGAAGTTTCTGCCCTAGTTGTACTCTTATTCTA
CAATGAGGAAATCCTTATACCCTGGTTTATTTGGTTCATTCTTGCAAATT
TCAATTAGGACCCAACCTCTGGCCagaaaaattataaagaatTGAAGAGA
GTTACAGAATAAATTGTTGCAAAGGGCATTTGCTTTAACCAAAttgaatg
attttattttttattattcaatTTAGGATACTCCGTCACTATCAGTGCAC
CTCATATGGTATGGACTTCAGTTGCCTACTTTTCACTACTTTCTATTTCT
CATGATAATAGTTTTTGTCTTCTTATTGAATAAATAAGTTGTACCTAATT
GCTTTCGAAAAGAAATTACTCCAAGGCTTAGAAATCAAGAATTAAGGAAA
ATTGGTATTTTATCATAATCACAAAAACGAACTTAGGTCCCATTAGAGAT
AAGGTAGAGAACGACAAGTTAGATACTACTATTGTTTATAGAACGAcata
atttgataaaagatcGATAAAGGTTTTTCCCTTTTTAAAATGGGATTGAG
ATGAACTCAACTGTTTTTCTCGTTTCTCTAGCATGTCCACGCATTGCAGC
ATCTTGAAGGACATTTACAGGAAGGAATGAGCGCACTCGATGTTGGCTCT
GGTAGTGGTTACCTTGCTGCTTGCATGGCCTACATGGTGAGTGCGGTGCA
TTTTCAATTACATTGTTTCATAATACTGTCATTATTCTGAAACTCTACTC
tttgctttcaaaataaaagaatgtgTAAATTTCTGTCACGAAAAGAAATT
GCCTCAAAAATTCAGATATTTTATCCTACAATTCTacgattttccttcaa
aaatacatatATTCCACCTGACAATAGTGGTGGCAAGACAGATTCTGTCT
GAAGAATTTTCCTTTATAAATACATTCGAATATATGGAATACATTCGAAT
TTATGGAATATACATTAAATACATCAAAATATGTATATTCTTATTTATTG
ATGATATTTTATTCAACAAAAGATTGCTTAGAGGAAAGCAAAAGCGTGAT
GGAATGATAATTGGtagtaatgaaaaaaaatttcactgcTTCCAATTATC
GTATTCCATCTTACAAAATGTTGGTGAAAAATCCAGAGAAATTTTTATAC
AATAATAATGTTCATTCTGTTCGTTCTGTGCAGTTTTGTGCAGTGAAATT
TTCCTTAAAGAATACATGGATTTCTTCGAGGAAgttttcgttcaaaaatt
tgatttttcttccgAGATTCTGTTCTTAATTATCCTTAAAATCAATCCAT
GGTAAAGTTTTTCTCAATATAATCCGCAGCGGAAACAAAAttgctgtaac
ttttgatcaatTAGATAACGGTCATAGAATCAGAAGGTGGGGTATTATCA
AAAGGAAAACACTATGAAATTGGAAatacaaagatgaaaaaaaaaaaaaa
tcaacttcttttaAACTTGTCCTTAACGTCTTTCTGAAATGTATGATTCG
TTTATAACGAAAATTCCTTCAAAGATGCATggtattttccttcaaaaata
cattgATTTCTCCCATGGAAGTTCCAAATAGGccaaataaaaacaatcca
TCGAGAAACCTGGCAATCGAGCGGAATCTGATATATGGACAAACCAGCCC
TGACTGtatgaaataattgattttgatgCAGAAGTTTTCCTTAGAAACGC
ATTGATTCTTCCTGAGAGAATTATCCTTGAAAATACATTGATCGTGTTTG
GTAAATTTTCTTCATATCTTATAAAAATTTCTCCAAGGAGGTATCTCTTT
TTAAATGCATCGATTCTACACAACGAGCTTCTCGTCAAAAATACATGGAT
TTTGACATGATTTTTGTCCAAAGAAGCTTTTCTAAAACACATTGATTCTT
TATGAAAAACTTTTCCTTGAAAATACACTGATTATGTTTGGCAAATTGTC
TCTCCAAAATACGGACCTTCTCCACAgtaattgtttttcaaattgtatga
gaaaaaattgaaatttttctcctaaaatcaattttagccAACTAAATTTT
CCTTCAAATATTTACAGTAGCATTTTTCTTCTGTACAAGAACAAAATTTT
CTCTCAGGTATAATGCACAGGTTTTGTCTTTTCCTTGATTGTAAGGTGAA
CAGAACACAAAATGCCCATCATTGTGGTGTGAATGATTTGCCAGACAACC
ACTCTCTGTGGGAAATTCAATGTACTTTGCAAACTTTTCTATGAATAGTT
TCACTATTGAATCTTATGTTCATTCTGTTGATTCAagtataaataataat
aataataatatgagCTGTCAAGTGTGTTCGTCATTTATTAAAATACCAAA
CTTTTTCGcagaatttctgtccaaaatacctaaagtctgttccaaaagaA
TTGGGAGTCTGTACATTTCGCTTTCAAAGGAGATAAAAACGTACTGAAAC
GTAGTACCTTGGAGGAAAGAAAACGTTTTTTGTGACACCAGTATGACGTT
TTTCATCAAACTATTTCCAAGCAACCTTTACTTCACTCAGAGAACATTAT
TTAAACTTTCATTTGAACTTCAAAAGCGTCTAAACTGAGAGCCGTTGTAC
CAAATTTATAAGAGTTCAAATTATAATTACGACTTTTAATTAGaatagaa
aatcttttaaaagcaACTATTAACTCAATACAAAACTTGTTTCAGTCACA
GCCGGTCATCTCAGCCAAGGTGTGTAACTATGTGCATCATGACAGTTTCG
TCATACTACATGAATTCTTTCCAAGCAATGCTTTGTTAGTTATTATCATT
TCTCCaggaaaaggaagaaaaatataGTTTTTTGAAAGATATTGTAACTT
ATcattggaaataattttttcgaaCTCTTTTTTTATAGGTTGGAAAAACA
GGATGTGTTGTTGGCATTGATCACATTCCAGAATTAGTGGAAAGATCTgt
tcaaaatgtaaacaaaggcAATTCTGATATTCTCACAAGCAAGAATTTGG
AACTCGTAGGTAAGTAAGCCTCTTTGATCACTTTTTCTAGCTTcaattga
atttcgatttcCGATCACAAAGTGtcggattttgctgaaattttgcagtt
AGCACGCATGCATCTTGGGTGAATATTTGGGaatatcttttaatttttca
aaagtttttattttgtgCCTAAAGATTCTCATTTTTGCtacatttttgtg
tttttgatatTCGAAAAATGAAGCCAAATGTTCAACTCTCGAGTGTATCT
CTGTATAAATAGATTACCACAAGAGATTGactaagaagaaaaaataaaag
aacatgTGTAGACGCTGTGCGTCTATGCTGTGTGTCTATTACTAACTACT
TAATGTGTTTTATCAACAGTATTACATTACCATTGACAATGAGGTTCAAC
CGAGTCGTGGTTATTGCTAATTGAAAACTTTTCCCAATATCCCGCTAGAC
GTCATGAAACACTGACGGCTATGCAATANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATTTCTGTTTTGGTGTAGACATTTGGGATCAATTGTATTGTGGTTCA
AGTGTTTACCGTATAGTGGCAACCTATAAAAATGTTCGTTGTAAGGGTCA
GCCCCCTTTGTTTATCAGTCTAAAGCTCGTATtagcaatttttcaaattt
tggaaaagattGCTACACAACAAAGTCTATTTGTCCCatttttatcatta
aaaatATCGTTTTTCCTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTGCTAATTGAAAACTTTTCCCAATATCCCGCTAGA
CGTCATGAAACACTGACGGCTATGCAATATTTGGAGGTCTCTTAGGAGAC
TATAATACACTAATTGAAAGATGCTTGGATAAAGGCACTTAGGGCCTGGA
CAAATTTCTGTTTTGGTGTAGACATTTGGGATCAATTGTATTGTGGTTCA
AGTGTTTACCGTATAGTGGCAACCTATAAAAATGTTCGTTGTAAGGGTCA
GCCACCTTTGTTTATCAGTCTAAAGCTCGTATtagcaatttttcaaattt
ttgaaaagattgctACACAACAAAGTCTATTTGTGTAGACATTTGGGATC
AATNGATTGCTACACAACAAAGTCTATTGGTGTAGACATTTGGGATCAAT
TGCATTGTGGTTCAAGTGTTTACCGGATAGTGGCAACCTATTAAAATGTT
CGTTGTAAGCCACAAGCTATCCATTACAGTATCGTTACCTTAATGGAATG
TAAAATTTAGTTCCCGTAAGATAAGCCgtgcttttttaaccaaaatttga
taattttgataactttttaacttttggcgCGATAGTAGCATCATCGACTT
TTATGGGTTCAGAATATACCAGCACGTTTTCGTTTTTAAAAATCCTTCCA
TTTACATATCACGATATTTTTATTGACAACCCTTACGTTATATAGTGTAA
AATCCCCcattttttaaaatgatttttttcaaacggTGTCATCTCATTTA
CTTTCAGTCGGTGATGGACGGTTGGGTTATTTGCCACGGGCACCTTTCGA
TGCAATTCACGTTGGAGCTGCTGCTCCCCATCTTCCTCAAGCTGTAAGTG
TTCTACAATAAAAACAGATAGAGTCTATTAGAGTaatactagacggttcc
cgtcgtcgcaaacgccggtttagcATGTGCCTTAAAAGCCCTTAGGATGG
TATTGTTGATGCTCTCTTACTTTATTTTTAAAGGGATTTCGAATTAGTTT
TTGGAGTACATCGATTAGTTGGAAGATTTCTTGTAAATACCTCTTTCTAC
TTCAAATTGAATGTGAGAATATGACTTGAAATCTTCACCATAAAATTAGC
TTAGTAAACAATAAACTGTCAACCATGAGAGTTTCTTCAGGAAGGTTGAG
GGCTTTTTCAATTTAATCGAAAACGGAACTTATTGAGTAGTAAAATGTCA
AATTGAGAGCGTCAAATGTATCATCAGTGTATAAGAAtgaaaaagttcta
aaaaatgTTGCTGTATCTACGAATTTGAGGTCGACATGACGCGcctaaaa
agaccaaaaaataaatactttgatttcaaaacaatcatGAATATATCCAA
ACTTACAGGCAACAACTTATATCCACTTCTCACACGGAAAACCTCCGCTT
TTTACCTGTGCATTGACTATTTGaaaacccaatttttactaACTTTTTCG
TAGAAAGTGCCACGCCTTCTAAAACTCCAAAATTTATGTCACATGATGTT
TAGAATAATTGAAGTCAGAATTATTTTCGTTAAAAAGTCACTGTAAGGGC
TTCTTCGATTCAAACGCCAAATCCTTTTGAGGACGGGGGTTTTATCGGAA
GGCAGTGTTAATTTTCGCGCTCAATCATAGAtgaaaattaaactttaaaC
ATAAATTAAAATCACGACGTATCATCAACTGCTTTTTCGAAATACAATAA
GATATTTTTTGTCACAACACTGCAGGAAATCCAACTTTCATACTCGAATC
CTTCGAATCAACCCCCtggcaaatttttgaaataacagCTCAGCTACCAT
CTTGCGTTAGACACGCTTTTCGTAAACTCATTTAATATATAAAGATAACT
TAAGTTCCGGCGAGATATTTCTTTTCTATTCTTTATGTTGTTTTGTAAGG
CAATCTAATCCTATTTGAAGCCACCTCTTTTGCAGATTTTAACAAAGTAA
AAGCTATTTGgttaatttttgaaaccttaGTAGCACATTCCAATCGAATC
TGGTAAGGGTAGCTCCCAGTATCGTTTCAAAATACAAACATATTGAAATT
AGAAGCTTTCTCTCATTAGCTCATTGATCAGTTGAAACCTGGAGGTCGGC
TAGTCATTCCTGTTGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTG
GATAAATCCCCTGATGGAAAAAGTATCGAGAAGAAAACACTAATGGGTGT
TATATATGTTCCTTTGACCGACAAAGATCGCCAGATGAAGAGTAGGTTAT
GTTCTTTGATTATGATGCTAATATTTGAAGTGAACATTTTCTAAAGAATT
GTCCCAAAGAATCACTAGGAAATACGGTGTGTCCGATAAAAAAACGGACC
AGATATTATACAaagcaaaatcttcaaaatttaccATTAGATAAGCCAGG
CCCAAGGTATtcaaaattagtttttaaaaataaatgagTGATTATGTCAT
AAAAACTGATATAAATAATGagcattttcttttatttaaatccttttccc
ttttttttccggacacaaaaaaaaaatcttttaacttTTCAGGTCGATGA
ATCACGAGCACGAAATAGTGACATTCTCGAAGGAAGATATTGATTAGATG
CAGACTTGTCTTTTTTGATGGTGCATCAAATTGACTTGTATGTATCAATG
GCTGTAAAAACGGACAATTCTTGGATAAAATTTCACCGAATTTCTCCATA
TAAAACATACAGCTATAATTTATTTAGTTTGAATAAAGACAACACACAAG
ATAAATGTGGAGATCATTACAACACTCCAGCTTTTGGATTAATTCGAATT
TGGAGAGTGGTGAAAGACAAATAagacaaataatttttttttttgctcaa
ttttgaattattatttAGGGAAATAAATGAATGCCAAC Coding sequence (CDS) from alignment at scaffold_70:31584..40971+ >TCONS_00072057 ID=TCONS_00072057|Name=TCONS_00072057|organism=Clytia hemisphaerica|type=CDS|length=6336bp|location=Sequence derived from alignment at scaffold_70:31584..40971+ (Clytia hemisphaerica)
ttcagggaaaaaataacaaaaaataacaaagttgCAAATTCTTCGTGTCC
AATTTATATGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGACAC
AAAGGACAATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCATC
CAGCAACTTCAAAAAAATGACATTCTAACATCCAACAGAGTAGCAAGTGC
CATGGCAAAAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATATGG
ATTCTCCACAACCCATTGGATACTCCGTCACTATCAGTGCACCTCATATG
CATGTCCACGCATTGCAGCATCTTGAAGGACATTTACAGGAAGGAATGAG
CGCACTCGATGTTGGCTCTGGTAGTGGTTACCTTGCTGCTTGCATGGCCT
ACATGGTTGGAAAAACAGGATGTGTTGTTGGCATTGATCACATTCCAGAA
TTAGTGGAAAGATCTgttcaaaatgtaaacaaaggcAATTCTGATATTCT
CACAAGCAAGAATTTGGAACTCGTAGTCGGTGATGGACGGTTGGGTTATT
TGCCACGGGCACCTTTCGATGCAATTCACGTTGGAGCTGCTGCTCCCCAT
CTTCCTCAAGCTCTCATTGATCAGTTGAAACCTGGAGGTCGGCTAGTCAT
TCCTGTTGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTGGATAAAT
CCCCTGATGGAAAAAGTATCGAGAAGAAAACACTAATGGGTGTTATATAT
GTTCCTTTGACCGACAAAGATCGCCAGATGAAGAGTCGATGAttcaggga
aaaaataacaaaaaataacaaagttgCAAATTCTTCGTGTCCAATTTATA
TGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGACACAAAGGACA
ATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCATCCAGCAACT
TCAAAAAAATGACATTCTAACATCCAACAGAGTAGCAAGTGCCATGGCAA
AAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATATGGATTCTCCA
CAACCCATTGGATACTCCGTCACTATCAGTGCACCTCATATGCATGTCCA
CGCATTGCAGCATCTTGAAGGACATTTACAGGAAGGAATGAGCGCACTCG
ATGTTGGCTCTGGTAGTGGTTACCTTGCTGCTTGCATGGCCTACATGGTT
GGAAAAACAGGATGTGTTGTTGGCATTGATCACATTCCAGAATTAGTGGA
AAGATCTgttcaaaatgtaaacaaaggcAATTCTGATATTCTCACAAGCA
AGAATTTGGAACTCGTAGTCGGTGATGGACGGTTGGGTTATTTGCCACGG
GCACCTTTCGATGCAATTCACGTTGGAGCTGCTGCTCCCCATCTTCCTCA
AGCTCTCATTGATCAGTTGAAACCTGGAGGTCGGCTAGTCATTCCTGTTG
GTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTGGATAAATCCCCTGAT
GGAAAAAGTATCGAGAAGAAAACACTAATGGGTGTTATATATGTTCCTTT
GACCGACAAAGATCGCCAGATGAAGAGTCGATGAttcagggaaaaaataa
caaaaaataacaaagttgCAAATTCTTCGTGTCCAATTTATATGGTGTTT
GGTACACGGTTACTGACATTGTTCTGCTTGACACAAAGGACAATGGCTTG
GCGCTCACATGGTAAAGACAACGCACATCTCATCCAGCAACTTCAAAAAA
ATGACATTCTAACATCCAACAGAGTAGCAAGTGCCATGGCAAAAGTGGAC
CGACAAAACTATTGTTATGAGAATGCTTATATGGATTCTCCACAACCCAT
TGGATACTCCGTCACTATCAGTGCACCTCATATGCATGTCCACGCATTGC
AGCATCTTGAAGGACATTTACAGGAAGGAATGAGCGCACTCGATGTTGGC
TCTGGTAGTGGTTACCTTGCTGCTTGCATGGCCTACATGGTTGGAAAAAC
AGGATGTGTTGTTGGCATTGATCACATTCCAGAATTAGTGGAAAGATCTg
ttcaaaatgtaaacaaaggcAATTCTGATATTCTCACAAGCAAGAATTTG
GAACTCGTAGTCGGTGATGGACGGTTGGGTTATTTGCCACGGGCACCTTT
CGATGCAATTCACGTTGGAGCTGCTGCTCCCCATCTTCCTCAAGCTCTCA
TTGATCAGTTGAAACCTGGAGGTCGGCTAGTCATTCCTGTTGGTCCTGAA
GGAGGAAATCAGAAACTTCTGCAAGTGGATAAATCCCCTGATGGAAAAAG
TATCGAGAAGAAAACACTAATGGGTGTTATATATGTTCCTTTGACCGACA
AAGATCGCCAGATGAAGAGTCGATGAttcagggaaaaaataacaaaaaat
aacaaagttgCAAATTCTTCGTGTCCAATTTATATGGTGTTTGGTACACG
GTTACTGACATTGTTCTGCTTGACACAAAGGACAATGGCTTGGCGCTCAC
ATGGTAAAGACAACGCACATCTCATCCAGCAACTTCAAAAAAATGACATT
CTAACATCCAACAGAGTAGCAAGTGCCATGGCAAAAGTGGACCGACAAAA
CTATTGTTATGAGAATGCTTATATGGATTCTCCACAACCCATTGGATACT
CCGTCACTATCAGTGCACCTCATATGCATGTCCACGCATTGCAGCATCTT
GAAGGACATTTACAGGAAGGAATGAGCGCACTCGATGTTGGCTCTGGTAG
TGGTTACCTTGCTGCTTGCATGGCCTACATGGTTGGAAAAACAGGATGTG
TTGTTGGCATTGATCACATTCCAGAATTAGTGGAAAGATCTgttcaaaat
gtaaacaaaggcAATTCTGATATTCTCACAAGCAAGAATTTGGAACTCGT
AGTCGGTGATGGACGGTTGGGTTATTTGCCACGGGCACCTTTCGATGCAA
TTCACGTTGGAGCTGCTGCTCCCCATCTTCCTCAAGCTCTCATTGATCAG
TTGAAACCTGGAGGTCGGCTAGTCATTCCTGTTGGTCCTGAAGGAGGAAA
TCAGAAACTTCTGCAAGTGGATAAATCCCCTGATGGAAAAAGTATCGAGA
AGAAAACACTAATGGGTGTTATATATGTTCCTTTGACCGACAAAGATCGC
CAGATGAAGAGTCGATGAttcagggaaaaaataacaaaaaataacaaagt
tgCAAATTCTTCGTGTCCAATTTATATGGTGTTTGGTACACGGTTACTGA
CATTGTTCTGCTTGACACAAAGGACAATGGCTTGGCGCTCACATGGTAAA
GACAACGCACATCTCATCCAGCAACTTCAAAAAAATGACATTCTAACATC
CAACAGAGTAGCAAGTGCCATGGCAAAAGTGGACCGACAAAACTATTGTT
ATGAGAATGCTTATATGGATTCTCCACAACCCATTGGATACTCCGTCACT
ATCAGTGCACCTCATATGCATGTCCACGCATTGCAGCATCTTGAAGGACA
TTTACAGGAAGGAATGAGCGCACTCGATGTTGGCTCTGGTAGTGGTTACC
TTGCTGCTTGCATGGCCTACATGGTTGGAAAAACAGGATGTGTTGTTGGC
ATTGATCACATTCCAGAATTAGTGGAAAGATCTgttcaaaatgtaaacaa
aggcAATTCTGATATTCTCACAAGCAAGAATTTGGAACTCGTAGTCGGTG
ATGGACGGTTGGGTTATTTGCCACGGGCACCTTTCGATGCAATTCACGTT
GGAGCTGCTGCTCCCCATCTTCCTCAAGCTCTCATTGATCAGTTGAAACC
TGGAGGTCGGCTAGTCATTCCTGTTGGTCCTGAAGGAGGAAATCAGAAAC
TTCTGCAAGTGGATAAATCCCCTGATGGAAAAAGTATCGAGAAGAAAACA
CTAATGGGTGTTATATATGTTCCTTTGACCGACAAAGATCGCCAGATGAA
GAGTCGATGAttcagggaaaaaataacaaaaaataacaaagttgCAAATT
CTTCGTGTCCAATTTATATGGTGTTTGGTACACGGTTACTGACATTGTTC
TGCTTGACACAAAGGACAATGGCTTGGCGCTCACATGGTAAAGACAACGC
ACATCTCATCCAGCAACTTCAAAAAAATGACATTCTAACATCCAACAGAG
TAGCAAGTGCCATGGCAAAAGTGGACCGACAAAACTATTGTTATGAGAAT
GCTTATATGGATTCTCCACAACCCATTGGATACTCCGTCACTATCAGTGC
ACCTCATATGCATGTCCACGCATTGCAGCATCTTGAAGGACATTTACAGG
AAGGAATGAGCGCACTCGATGTTGGCTCTGGTAGTGGTTACCTTGCTGCT
TGCATGGCCTACATGGTTGGAAAAACAGGATGTGTTGTTGGCATTGATCA
CATTCCAGAATTAGTGGAAAGATCTgttcaaaatgtaaacaaaggcAATT
CTGATATTCTCACAAGCAAGAATTTGGAACTCGTAGTCGGTGATGGACGG
TTGGGTTATTTGCCACGGGCACCTTTCGATGCAATTCACGTTGGAGCTGC
TGCTCCCCATCTTCCTCAAGCTCTCATTGATCAGTTGAAACCTGGAGGTC
GGCTAGTCATTCCTGTTGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAA
GTGGATAAATCCCCTGATGGAAAAAGTATCGAGAAGAAAACACTAATGGG
TGTTATATATGTTCCTTTGACCGACAAAGATCGCCAGATGAAGAGTCGAT
GAttcagggaaaaaataacaaaaaataacaaagttgCAAATTCTTCGTGT
CCAATTTATATGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGAC
ACAAAGGACAATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCA
TCCAGCAACTTCAAAAAAATGACATTCTAACATCCAACAGAGTAGCAAGT
GCCATGGCAAAAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATAT
GGATTCTCCACAACCCATTGGATACTCCGTCACTATCAGTGCACCTCATA
TGCATGTCCACGCATTGCAGCATCTTGAAGGACATTTACAGGAAGGAATG
AGCGCACTCGATGTTGGCTCTGGTAGTGGTTACCTTGCTGCTTGCATGGC
CTACATGGTTGGAAAAACAGGATGTGTTGTTGGCATTGATCACATTCCAG
AATTAGTGGAAAGATCTgttcaaaatgtaaacaaaggcAATTCTGATATT
CTCACAAGCAAGAATTTGGAACTCGTAGTCGGTGATGGACGGTTGGGTTA
TTTGCCACGGGCACCTTTCGATGCAATTCACGTTGGAGCTGCTGCTCCCC
ATCTTCCTCAAGCTCTCATTGATCAGTTGAAACCTGGAGGTCGGCTAGTC
ATTCCTGTTGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTGGATAA
ATCCCCTGATGGAAAAAGTATCGAGAAGAAAACACTAATGGGTGTTATAT
ATGTTCCTTTGACCGACAAAGATCGCCAGATGAAGAGTCGATGAttcagg
gaaaaaataacaaaaaataacaaagttgCAAATTCTTCGTGTCCAATTTA
TATGGTGTTTGGTACACGGTTACTGACATTGTTCTGCTTGACACAAAGGA
CAATGGCTTGGCGCTCACATGGTAAAGACAACGCACATCTCATCCAGCAA
CTTCAAAAAAATGACATTCTAACATCCAACAGAGTAGCAAGTGCCATGGC
AAAAGTGGACCGACAAAACTATTGTTATGAGAATGCTTATATGGATTCTC
CACAACCCATTGGATACTCCGTCACTATCAGTGCACCTCATATGCATGTC
CACGCATTGCAGCATCTTGAAGGACATTTACAGGAAGGAATGAGCGCACT
CGATGTTGGCTCTGGTAGTGGTTACCTTGCTGCTTGCATGGCCTACATGG
TTGGAAAAACAGGATGTGTTGTTGGCATTGATCACATTCCAGAATTAGTG
GAAAGATCTgttcaaaatgtaaacaaaggcAATTCTGATATTCTCACAAG
CAAGAATTTGGAACTCGTAGTCGGTGATGGACGGTTGGGTTATTTGCCAC
GGGCACCTTTCGATGCAATTCACGTTGGAGCTGCTGCTCCCCATCTTCCT
CAAGCTCTCATTGATCAGTTGAAACCTGGAGGTCGGCTAGTCATTCCTGT
TGGTCCTGAAGGAGGAAATCAGAAACTTCTGCAAGTGGATAAATCCCCTG
ATGGAAAAAGTATCGAGAAGAAAACACTAATGGGTGTTATATATGTTCCT
TTGACCGACAAAGATCGCCAGATGAAGAGTCGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072057-exon-scaffold_70-1491911889:31584..31747 | TCONS_00072057-exon-scaffold_70-1491911889:31584..31747 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:31584..31747 | TCONS_00072057-exon-scaffold_70-1510915933:31584..31747 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:31584..31747 | TCONS_00072057-exon-scaffold_70-1575043694:31584..31747 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:31940..32044 | TCONS_00072057-exon-scaffold_70-1491911889:31940..32044 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:31940..32044 | TCONS_00072057-exon-scaffold_70-1510915933:31940..32044 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:31940..32044 | TCONS_00072057-exon-scaffold_70-1575043694:31940..32044 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:32260..32291 | TCONS_00072057-exon-scaffold_70-1491911889:32260..32291 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:32260..32291 | TCONS_00072057-exon-scaffold_70-1510915933:32260..32291 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:32260..32291 | TCONS_00072057-exon-scaffold_70-1575043694:32260..32291 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:32615..32719 | TCONS_00072057-exon-scaffold_70-1491911889:32615..32719 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:32615..32719 | TCONS_00072057-exon-scaffold_70-1510915933:32615..32719 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:32615..32719 | TCONS_00072057-exon-scaffold_70-1575043694:32615..32719 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:34922..35042 | TCONS_00072057-exon-scaffold_70-1491911889:34922..35042 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:34922..35042 | TCONS_00072057-exon-scaffold_70-1510915933:34922..35042 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:34922..35042 | TCONS_00072057-exon-scaffold_70-1575043694:34922..35042 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:38841..38926 | TCONS_00072057-exon-scaffold_70-1491911889:38841..38926 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:38841..38926 | TCONS_00072057-exon-scaffold_70-1510915933:38841..38926 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:38841..38926 | TCONS_00072057-exon-scaffold_70-1575043694:38841..38926 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:40153..40324 | TCONS_00072057-exon-scaffold_70-1491911889:40153..40324 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:40153..40324 | TCONS_00072057-exon-scaffold_70-1510915933:40153..40324 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:40153..40324 | TCONS_00072057-exon-scaffold_70-1575043694:40153..40324 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1491911889:40626..40971 | TCONS_00072057-exon-scaffold_70-1491911889:40626..40971 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1510915933:40626..40971 | TCONS_00072057-exon-scaffold_70-1510915933:40626..40971 | Clytia hemisphaerica | exon |
| TCONS_00072057-exon-scaffold_70-1575043694:40626..40971 | TCONS_00072057-exon-scaffold_70-1575043694:40626..40971 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_70 | supercontig | scaffold_70:31584..40971 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006464 | cellular protein modification process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004719 | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006464 |
cellular protein modification process |
| molecular_function |
GO:0004719 |
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity |
Blast
BLAST of TCONS_00072057 vs. Swiss-Prot (Human)
Match: PIMT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo sapiens GN=PCMT1 PE=1 SV=4) HSP 1 Score: 272.707 bits (696), Expect = 1.761e-89 Identity = 138/223 (61.88%), Postives = 165/223 (73.99%), Query Frame = 2
Query: 110 MAWRSHGKDNAHLIQQLQKNDILTSNRVASAMAKVDRQNYCYENAYMDSPQPIGYSVTISAPHMHVHALQHLEGHLQEGMSALDVGSGSGYLAACMAYMVGKTGCVVGIDHIPELVERSVQNVNKGNSDILTSKNLELVVGDGRLGYLPRAPFDAIHVGAAAPHLPQALIDQLKPGGRLVIPVGPEGGNQKLLQVDKSPDGKSIEKKTLMGVIYVPLTDKDRQ 778
MAW+S G ++ LI L+KN I+ +++V M DR +Y N YMDSPQ IG+ TISAPHMH +AL+ L L EG ALDVGSGSG L AC A MVG TG V+GIDHI ELV+ SV NV K + +L+S ++LVVGDGR+GY AP+DAIHVGAAAP +PQALIDQLKPGGRL++PVGP GGNQ L Q DK DG SI+ K LMGVIYVPLTDK++Q
Sbjct: 1 MAWKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SIKMKPLMGVIYVPLTDKEKQ 222
The following BLAST results are available for this feature:
|
