|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072040 ID=TCONS_00072040|Name=TCONS_00072040|organism=Clytia hemisphaerica|type=transcript|length=891bp
ctttGTTACTGTAGAAgtggaatatattttttataaaaaaagtgtatttt
gattttatcttgataaaaatatttacaaaaataatggaaaactaaatgaa
ataattaaattttaaaggtaaaaacttgtttaaaaaatgcaaaaattata
aatattttgaaaaccatttaagtaactttcaaaaatttgttaaaaaatat
tcaatctcGCACGCAAAGCAACTTTCATCATTTTGCAATGTTACGGATAA
CGTGGTACAATCGTTTACCTAGTTTGCTATTCGATTCTAACAGCTCTTAC
GAATAAGGGCCTCTTGGGTCGTGATGGTGTGATCTACTAATACGTGATTG
ATGAGAGATTTTTATTTGTGTCATAAGGGAAATTCTctctaaagtttaaa
aaaactaCAAAGTGCTTTTATTTACTTCTGAAATGTGGAGTTTCAACTTT
GAGTTTCAGCATTGaatttaaggcttaaaacttacAGCCTGGAAAAAAAT
AAACCCTACCatattgaaatattcaataaaataaagTGTGAGTAATGGGG
GGCCCTAGTAATGAAATCCCCTTACTCGTCTAaacttcaaattctgaaaa
agttaaaatacccaaattctACATGAATTTTTACCTTCATTGTGGGTACA
TCCGCTTTTGAATAAAGGGCATTGGTCAGCTTTGTGCAGACAAAAAAATA
CGCTTTGGCTAGTTGTCTGTGTGCGctacattttttaaactcaTTTAACA
TTAATCCGAAGCCACGGGACTTGGATGAAATTGAAcctaatagtaggggg
aaatttgtaaaatcgctcgatttttttagtcaaagcacttgttatacatt
tttggaaagctaaggggtaggggaatcaaaataacttaggt Run BLAST on NCBI transcript from alignment at scaffold_69:155300..156190 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072040 ID=TCONS_00072040|Name=TCONS_00072040|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at scaffold_69:155300..156190 (Clytia hemisphaerica)
acctaagttattttgattcccctaccccttagctttccaaaaatgtataa
caagtgctttgactaaaaaaatcgagcgattttacaaatttccccctact
attaggTTCAATTTCATCCAAGTCCCGTGGCTTCGGATTAATGTTAAAtg
agtttaaaaaatgtagCGCACACAGACAACTAGCCAAAGCGTATTTTTTT
GTCTGCACAAAGCTGACCAATGCCCTTTATTCAAAAGCGGATGTACCCAC
AATGAAGGTAAAAATTCATGTagaatttgggtattttaactttttcagaa
tttgaagttTAGACGAGTAAGGGGATTTCATTACTAGGGCCCCCCATTAC
TCACActttattttattgaatatttcaatatGGTAGGGTTTATTTTTTTC
CAGGCTgtaagttttaagccttaaattCAATGCTGAAACTCAAAGTTGAA
ACTCCACATTTCAGAAGTAAATAAAAGCACTTTGtagtttttttaaactt
tagagAGAATTTCCCTTATGACACAAATAAAAATCTCTCATCAATCACGT
ATTAGTAGATCACACCATCACGACCCAAGAGGCCCTTATTCGTAAGAGCT
GTTAGAATCGAATAGCAAACTAGGTAAACGATTGTACCACGTTATCCGTA
ACATTGCAAAATGATGAAAGTTGCTTTGCGTGCgagattgaatatttttt
aacaaatttttgaaagttacttaaatggttttcaaaatatttataatttt
tgcattttttaaacaagtttttacctttaaaatttaattatttcatttag
ttttccattatttttgtaaatatttttatcaagataaaatcaaaatacac
tttttttataaaaaatatattccacTTCTACAGTAACaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072040-exon-scaffold_69-1491911889:155300..156190 | TCONS_00072040-exon-scaffold_69-1491911889:155300..156190 | Clytia hemisphaerica | exon |
| TCONS_00072040-exon-scaffold_69-1510915933:155300..156190 | TCONS_00072040-exon-scaffold_69-1510915933:155300..156190 | Clytia hemisphaerica | exon |
| TCONS_00072040-exon-scaffold_69-1575043694:155300..156190 | TCONS_00072040-exon-scaffold_69-1575043694:155300..156190 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_69 | supercontig | scaffold_69:155300..156190 . |
Blast
The following BLAST results are available for this feature:
|
