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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072016 ID=TCONS_00072016|Name=TCONS_00072016|organism=Clytia hemisphaerica|type=transcript|length=1222bp
CtctattttcacaaaaaaacacaGATCAGAAagtcaagaaaatgaaaaaa
aagctgACTGTAGTGATGATAGTTATCCCTAACTTAGAAAAGTAAACCCT
ATTTCACAGTAGTCAATAAATGGTCAAATATTATAACATCATATCACTAT
CAAATACAAATGGTAATAAGTCTCTCGGGACTCTCATTAAGAAATACTCA
GGTATAAAGACTTTCTCCCAAAATAACTTTGTGCTGTCAACGATACGTTG
TTGCAAGTCTGCATCAGGGAAAATCCTCTCAACGCTTGAAGGTCCCTGCT
TGGCATATAGTACAAAATCACAGAAATTGGCTTCAGTCACCAATAGTTGT
AGTTGGATTTGGAAATAATATGAATGAGTTTTTTTCAATACCAATTTCTC
ATCAATCACATTAAAACACTGACGATTTACTTGACCTTTCTCACATTCAC
CTTTTACCACATTCATCACACTGTACAATCGTAAAATGTTCAAACATTTC
ACCTCCACAATATTGGCTAAATTTCCATCACTAAAAATAAGCCCATCAGG
GCTTGCTGCTAGATGTAGATATTTCTTGTTAATCCACAAACCACTGATAC
CAACTAGAACATTCATTCTCTGAGAGTATTCTCTCAAAGCATTAATTTCA
TTATCAATACCATATATCATGTATTTGTTGCAAAAGCTGGTTGGAAACCA
AAAATTCTTGTGCAGATAGTTAAAATGTGGGCGAAGGTTATCATATTTCG
AGAGATTTTCTCCAAGATTCATAGCACTTTGACATTTTGACGCAGTTATT
CTAAAACGGCGTTCATTGTGCCATTCTTTAGATTTGGCTTGGTCTTGAGT
TCCAGGTACCTCACAACAGATTTTTGAGTCCAAGATAGCATCATTTTTCT
TCGAGAATTCAGCACAGAATTGAGATACTAGGTGTTGATAAATAGCCTTG
TCTGGGTCATCGAGCTTCCAATCACCATATTTGATATATAACACAGATTC
CCACATACTGGGTTGTTCGTCAGTTTGTaattcaatgataaaatttctaC
GTGCCTCCTCAGGCACAGTACGTTGATTCTCTGGTCTCGGATCGAAATAG
TAGAGTTCAGATGGAGGTCTGCGTTTACTTGATGGATATACTGCTTCATG
GAGCTTACCAGGATCCTTCTCTCGTTTTTTCCCCTTATCCCATGGGCACT
CTTTTGATGTTGAGGGTTGTAT Run BLAST on NCBI protein sequence of TCONS_00072016-protein >TCONS_00072016-protein ID=TCONS_00072016-protein|Name=TCONS_00072016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
IQPSTSKECPWDKGKKREKDPGKLHEAVYPSSKRRPPSELYYFDPRPENQ
RTVPEEARRNFIIELQTDEQPSMWESVLYIKYGDWKLDDPDKAIYQHLVS
QFCAEFSKKNDAILDSKICCEVPGTQDQAKSKEWHNERRFRITASKCQSA
MNLGENLSKYDNLRPHFNYLHKNFWFPTSFCNKYMIYGIDNEINALREYS
QRMNVLVGISGLWINKKYLHLAASPDGLIFSDGNLANIVEVKCLNILRLY
SVMNVVKGECEKGQVNRQCFNVIDEKLVLKKTHSYYFQIQLQLLVTEANF
CDFVLYAKQGPSSVERIFPDADLQQRIVDSTKLFWEKVFIPEYFLMRVPR
DLLPFVFDSDMML Run BLAST on NCBI transcript from alignment at scaffold_68:2574..3795 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072016 ID=TCONS_00072016|Name=TCONS_00072016|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_68:2574..3795 (Clytia hemisphaerica)
ATACAACCCTCAACATCAAAAGAGTGCCCATGGGATAAGGGGAAAAAACG
AGAGAAGGATCCTGGTAAGCTCCATGAAGCAGTATATCCATCAAGTAAAC
GCAGACCTCCATCTGAACTCTACTATTTCGATCCGAGACCAGAGAATCAA
CGTACTGTGCCTGAGGAGGCACGtagaaattttatcattgaattACAAAC
TGACGAACAACCCAGTATGTGGGAATCTGTGTTATATATCAAATATGGTG
ATTGGAAGCTCGATGACCCAGACAAGGCTATTTATCAACACCTAGTATCT
CAATTCTGTGCTGAATTCTCGAAGAAAAATGATGCTATCTTGGACTCAAA
AATCTGTTGTGAGGTACCTGGAACTCAAGACCAAGCCAAATCTAAAGAAT
GGCACAATGAACGCCGTTTTAGAATAACTGCGTCAAAATGTCAAAGTGCT
ATGAATCTTGGAGAAAATCTCTCGAAATATGATAACCTTCGCCCACATTT
TAACTATCTGCACAAGAATTTTTGGTTTCCAACCAGCTTTTGCAACAAAT
ACATGATATATGGTATTGATAATGAAATTAATGCTTTGAGAGAATACTCT
CAGAGAATGAATGTTCTAGTTGGTATCAGTGGTTTGTGGATTAACAAGAA
ATATCTACATCTAGCAGCAAGCCCTGATGGGCTTATTTTTAGTGATGGAA
ATTTAGCCAATATTGTGGAGGTGAAATGTTTGAACATTTTACGATTGTAC
AGTGTGATGAATGTGGTAAAAGGTGAATGTGAGAAAGGTCAAGTAAATCG
TCAGTGTTTTAATGTGATTGATGAGAAATTGGTATTGAAAAAAACTCATT
CATATTATTTCCAAATCCAACTACAACTATTGGTGACTGAAGCCAATTTC
TGTGATTTTGTACTATATGCCAAGCAGGGACCTTCAAGCGTTGAGAGGAT
TTTCCCTGATGCAGACTTGCAACAACGTATCGTTGACAGCACAAAGTTAT
TTTGGGAGAAAGTCTTTATACCTGAGTATTTCTTAATGAGAGTCCCGAGA
GACTTATTACCATTTGTATTTGATAGTGATATGATGTTATAATATTTGAC
CATTTATTGACTACTGTGAAATAGGGTTTACTTTTCTAAGTTAGGGATAA
CTATCATCACTACAGTcagcttttttttcattttcttgactTTCTGATCt
gtgtttttttgtgaaaatagaG Coding sequence (CDS) from alignment at scaffold_68:2574..3795 >TCONS_00072016 ID=TCONS_00072016|Name=TCONS_00072016|organism=Clytia hemisphaerica|type=CDS|length=1092bp|location=Sequence derived from alignment at scaffold_68:2574..3795 (Clytia hemisphaerica)
ATACAACCCTCAACATCAAAAGAGTGCCCATGGGATAAGGGGAAAAAACG
AGAGAAGGATCCTGGTAAGCTCCATGAAGCAGTATATCCATCAAGTAAAC
GCAGACCTCCATCTGAACTCTACTATTTCGATCCGAGACCAGAGAATCAA
CGTACTGTGCCTGAGGAGGCACGtagaaattttatcattgaattACAAAC
TGACGAACAACCCAGTATGTGGGAATCTGTGTTATATATCAAATATGGTG
ATTGGAAGCTCGATGACCCAGACAAGGCTATTTATCAACACCTAGTATCT
CAATTCTGTGCTGAATTCTCGAAGAAAAATGATGCTATCTTGGACTCAAA
AATCTGTTGTGAGGTACCTGGAACTCAAGACCAAGCCAAATCTAAAGAAT
GGCACAATGAACGCCGTTTTAGAATAACTGCGTCAAAATGTCAAAGTGCT
ATGAATCTTGGAGAAAATCTCTCGAAATATGATAACCTTCGCCCACATTT
TAACTATCTGCACAAGAATTTTTGGTTTCCAACCAGCTTTTGCAACAAAT
ACATGATATATGGTATTGATAATGAAATTAATGCTTTGAGAGAATACTCT
CAGAGAATGAATGTTCTAGTTGGTATCAGTGGTTTGTGGATTAACAAGAA
ATATCTACATCTAGCAGCAAGCCCTGATGGGCTTATTTTTAGTGATGGAA
ATTTAGCCAATATTGTGGAGGTGAAATGTTTGAACATTTTACGATTGTAC
AGTGTGATGAATGTGGTAAAAGGTGAATGTGAGAAAGGTCAAGTAAATCG
TCAGTGTTTTAATGTGATTGATGAGAAATTGGTATTGAAAAAAACTCATT
CATATTATTTCCAAATCCAACTACAACTATTGGTGACTGAAGCCAATTTC
TGTGATTTTGTACTATATGCCAAGCAGGGACCTTCAAGCGTTGAGAGGAT
TTTCCCTGATGCAGACTTGCAACAACGTATCGTTGACAGCACAAAGTTAT
TTTGGGAGAAAGTCTTTATACCTGAGTATTTCTTAATGAGAGTCCCGAGA
GACTTATTACCATTTGTATTTGATAGTGATATGATGTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072016-exon-scaffold_68-1491911889:2574..3795 | TCONS_00072016-exon-scaffold_68-1491911889:2574..3795 | Clytia hemisphaerica | exon |
| TCONS_00072016-exon-scaffold_68-1510915933:2574..3795 | TCONS_00072016-exon-scaffold_68-1510915933:2574..3795 | Clytia hemisphaerica | exon |
| TCONS_00072016-exon-scaffold_68-1575043694:2574..3795 | TCONS_00072016-exon-scaffold_68-1575043694:2574..3795 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_68 | supercontig | scaffold_68:2574..3795 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004518 | nuclease activity |
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0004518 |
nuclease activity |
Blast
The following BLAST results are available for this feature:
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