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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072011 ID=TCONS_00072011|Name=TCONS_00072011|organism=Clytia hemisphaerica|type=transcript|length=704bp
GCATGTTGTAGAATTTCGGTGAATTCTAATGGTAGATCCAATCATCTGTT
GGTCGAAGAGCCAAGAGTTAAGGATTCTGGAATTGAGAATATGCTTAAGA
ACCTATTTTCTATTGAAACTGTGCCTGAAACTCGCATGTCTGATTATGAG
GTATTTTCACAAGATGATCTGCATTTCCTTGAAATAGTTGAGTCTGCAGA
GTTCATTGATGGTCATTATCATGTTCCACTACCATTTAGAAATAAGAATC
AGTCCTTCCCTGACAATTTTCCACAAGCTTTGAAAAGAATGGATtcgttg
aaaagaaaatttcaatcttCTGCGCAGTTTCACTCTGATTATGTTAGTTT
CATGAAGAATATCATCGAGAAAGGTTATGCTCAAGAGGTTACGTCATCGT
ATCCTGAGGGCCAGAATTGGTACATTCCACatcatggtgtataccaccct
acgaaaaataaaatcagaGTTGTTTTTGATTGTAGTTCGTCATACAAAGG
TTTCTGTATGAACAAAGAGCTTGTGCAAGGTCCTGATCTAGCTAACCATT
TGATTGGAGTTTTGATGAGATTTCGCCAGGAACATGTTGCTTTCACAGCT
GATATTGAATCCATgtttttccaaatcaaaattCCTGAAAGTCAACGTCg
gtttcatcaatttttgtgGTGGAGGGATGGTGACTATTCCAAGCCACCTG
TCAC Run BLAST on NCBI protein sequence of TCONS_00072011-protein >TCONS_00072011-protein ID=TCONS_00072011-protein|Name=TCONS_00072011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
ACCRISVNSNGRSNHLLVEEPRVKDSGIENMLKNLFSIETVPETRMSDYE
VFSQDDLHFLEIVESAEFIDGHYHVPLPFRNKNQSFPDNFPQALKRMDSL
KRKFQSSAQFHSDYVSFMKNIIEKGYAQEVTSSYPEGQNWYIPHHGVYHP
TKNKIRVVFDCSSSYKGFCMNKELVQGPDLANHLIGVLMRFRQEHVAFTA
DIESMFFQIKIPESQRRFHQFLWWRDGDYSKPPV Run BLAST on NCBI transcript from alignment at scaffold_68:109061..109879+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072011 ID=TCONS_00072011|Name=TCONS_00072011|organism=Clytia hemisphaerica|type=transcript|length=819bp|location=Sequence derived from alignment at scaffold_68:109061..109879+ (Clytia hemisphaerica)
GCATGTTGTAGAATTTCGGTGAATTCTAATGGTAGATCCAATCATCTGTT
GGTCGAAGAGCCAAGAGTTAAGGATTCTGGAATTGAGAATATGCTTAAGA
ACCTATTTTCTATTGAAACTGTGCCTGAAACTCGCATGTCTGATTATGAG
GTATTTTCACAAGATGATCTGCATTTCCTTGAAATAGTTGAGTCTGCAGA
GTTCATTGATGGTCATTATCATGTTCCGCTACCATTTAGAAATAAGAATC
AGTCCTTCCCTGACAATTTTCCACAAGCTTTGAAAAGAATGGATtcgttg
aaaagaaaatttcaatcttCTGCGCAGTTTCACNCATGTTCCACTACCAT
TTAGAAATAAGAATCAGTCCTTCCCTGACAATTTTCCACAAGCTTTGAAA
AGAATGGATtcgttgaaaagaaaatttcaatcttCTGCGCAGTTTCACTC
TGATTATGTTAGTTTCATGAAGAATATCATCGAGAAAGGTTATGCTCAAG
AGGTTACGTCATCGTATCCTGAGGGCCAGAATTGGTACATTCCACatcat
ggtgtataccaccctacgaaaaataaaatcagaGTTGTTTTTGATTGTAG
TTCGTCATACAAAGGTTTCTGTATGAACAAAGAGCTTGTGCAAGGTCCTG
ATCTAGCTAACCATTTGATTGGAGTTTTGATGAGATTTCGCCAGGAACAT
GTTGCTTTCACAGCTGATATTGAATCCATgtttttccaaatcaaaattCC
TGAAAGTCAACGTCggtttcatcaatttttgtgGTGGAGGGATGGTGACT
ATTCCAAGCCACCTGTCAC Coding sequence (CDS) from alignment at scaffold_68:109061..109879+ >TCONS_00072011 ID=TCONS_00072011|Name=TCONS_00072011|organism=Clytia hemisphaerica|type=CDS|length=1404bp|location=Sequence derived from alignment at scaffold_68:109061..109879+ (Clytia hemisphaerica)
GCATGTTGTAGAATTTCGGTGAATTCTAATGGTAGATCCAATCATCTGTT
GGTCGAAGAGCCAAGAGTTAAGGATTCTGGAATTGAGAATATGCTTAAGA
ACCTATTTTCTATTGAAACTGTGCCTGAAACTCGCATGTCTGATTATGAG
GTATTTTCACAAGATGATCTGCATTTCCTTGAAATAGTTGAGTCTGCAGA
GTTCATTGATGGTCATTATCATGTTCCACTACCATTTAGAAATAAGAATC
AGTCCTTCCCTGACAATTTTCCACAAGCTTTGAAAAGAATGGATtcgttg
aaaagaaaatttcaatcttCTGCGCAGTTTCACTCTGATTATGTTAGTTT
CATGAAGAATATCATCGAGAAAGGTTATGCTCAAGAGGTTACGTCATCGT
ATCCTGAGGGCCAGAATTGGTACATTCCACatcatggtgtataccaccct
acgaaaaataaaatcagaGTTGTTTTTGATTGTAGTTCGTCATACAAAGG
TTTCTGTATGAACAAAGAGCTTGTGCAAGGTCCTGATCTAGCTAACCATT
TGATTGGAGTTTTGATGAGATTTCGCCAGGAACATGTTGCTTTCACAGCT
GATATTGAATCCATgtttttccaaatcaaaattCCTGAAAGTCAACGTCg
gtttcatcaatttttgtgGTGGAGGGATGGTGACTATTCCAAGCCACCTG
TCGCATGTTGTAGAATTTCGGTGAATTCTAATGGTAGATCCAATCATCTG
TTGGTCGAAGAGCCAAGAGTTAAGGATTCTGGAATTGAGAATATGCTTAA
GAACCTATTTTCTATTGAAACTGTGCCTGAAACTCGCATGTCTGATTATG
AGGTATTTTCACAAGATGATCTGCATTTCCTTGAAATAGTTGAGTCTGCA
GAGTTCATTGATGGTCATTATCATGTTCCACTACCATTTAGAAATAAGAA
TCAGTCCTTCCCTGACAATTTTCCACAAGCTTTGAAAAGAATGGATtcgt
tgaaaagaaaatttcaatcttCTGCGCAGTTTCACTCTGATTATGTTAGT
TTCATGAAGAATATCATCGAGAAAGGTTATGCTCAAGAGGTTACGTCATC
GTATCCTGAGGGCCAGAATTGGTACATTCCACatcatggtgtataccacc
ctacgaaaaataaaatcagaGTTGTTTTTGATTGTAGTTCGTCATACAAA
GGTTTCTGTATGAACAAAGAGCTTGTGCAAGGTCCTGATCTAGCTAACCA
TTTGATTGGAGTTTTGATGAGATTTCGCCAGGAACATGTTGCTTTCACAG
CTGATATTGAATCCATgtttttccaaatcaaaattCCTGAAAGTCAACGT
CggtttcatcaatttttgtgGTGGAGGGATGGTGACTATTCCAAGCCACC
TGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072011-exon-scaffold_68-1491911889:109061..109280 | TCONS_00072011-exon-scaffold_68-1491911889:109061..109280 | Clytia hemisphaerica | exon |
| TCONS_00072011-exon-scaffold_68-1510915933:109061..109280 | TCONS_00072011-exon-scaffold_68-1510915933:109061..109280 | Clytia hemisphaerica | exon |
| TCONS_00072011-exon-scaffold_68-1575043694:109061..109280 | TCONS_00072011-exon-scaffold_68-1575043694:109061..109280 | Clytia hemisphaerica | exon |
| TCONS_00072011-exon-scaffold_68-1491911889:109396..109879 | TCONS_00072011-exon-scaffold_68-1491911889:109396..109879 | Clytia hemisphaerica | exon |
| TCONS_00072011-exon-scaffold_68-1510915933:109396..109879 | TCONS_00072011-exon-scaffold_68-1510915933:109396..109879 | Clytia hemisphaerica | exon |
| TCONS_00072011-exon-scaffold_68-1575043694:109396..109879 | TCONS_00072011-exon-scaffold_68-1575043694:109396..109879 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_68 | supercontig | scaffold_68:109061..109879 + |
Blast
The following BLAST results are available for this feature:
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